RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 IRX2Q9BZI1 471 aaPredicted RBP9.1□□□□□ -0.95
CKAP2-203ENST00000378037 COA1Q9GZY4 146 aa9.1□□□□□ -0.95
CKAP2-203ENST00000378037 EPC1Q9H2F5 836 aa9.1□□□□□ -0.95
CKAP2-203ENST00000378037 ASTN2O75129 1339 aaPredicted RBP9.1□□□□□ -0.95
CKAP2-203ENST00000378037 SYNRGQ9UMZ2 1314 aa9.1□□□□□ -0.95
CKAP2-203ENST00000378037 SEMA3EO15041 775 aa9.1□□□□□ -0.95
CKAP2-203ENST00000378037 CLIC2O15247 247 aa9.1□□□□□ -0.95
CKAP2-203ENST00000378037 TEX33O43247 280 aa9.1□□□□□ -0.95
CKAP2-203ENST00000378037 FCER1AP12319 257 aa9.1□□□□□ -0.95
CKAP2-203ENST00000378037 SSR1P43307 286 aaKnown RBP9.1□□□□□ -0.95
CKAP2-203ENST00000378037 CTTNQ14247 550 aaKnown RBP9.1□□□□□ -0.95
CKAP2-203ENST00000378037 CDC37Q16543 378 aaPredicted RBP9.1□□□□□ -0.95
CKAP2-203ENST00000378037 TAF3Q5VWG9 929 aa9.1□□□□□ -0.95
CKAP2-203ENST00000378037 NEK8Q86SG6 692 aa9.1□□□□□ -0.95
CKAP2-203ENST00000378037 ADGRF4Q8IZF3 695 aa9.1□□□□□ -0.95
CKAP2-203ENST00000378037 RGS22Q8NE09 1264 aa9.1□□□□□ -0.95
CKAP2-203ENST00000378037 RAVER2Q9HCJ3 691 aaKnown RBP9.1□□□□□ -0.95
CKAP2-203ENST00000378037 E9PMD0 336 aa9.1□□□□□ -0.95
CKAP2-203ENST00000378037 RIOK3O14730 519 aaKnown RBP9.1□□□□□ -0.95
CKAP2-203ENST00000378037 METTL16Q86W50 562 aaKnown RBP9.1□□□□□ -0.95
CKAP2-203ENST00000378037 KSR1Q8IVT5 923 aa9.1□□□□□ -0.95
CKAP2-203ENST00000378037 CYP2W1Q8TAV3 490 aa9.1□□□□□ -0.95
CKAP2-203ENST00000378037 PURBQ96QR8 312 aaKnown RBP9.1□□□□□ -0.95
CKAP2-203ENST00000378037 DACH1Q9UI36 760 aa9.1□□□□□ -0.95
CKAP2-203ENST00000378037 MAN1B1Q9UKM7 699 aa9.1□□□□□ -0.95
CKAP2-203ENST00000378037 TM4SF1P30408 202 aa9.09□□□□□ -0.95
CKAP2-203ENST00000378037 FMR1Q06787 632 aaKnown RBP eCLIP9.09□□□□□ -0.95
CKAP2-203ENST00000378037 RASA3Q14644 834 aa9.09□□□□□ -0.95
CKAP2-203ENST00000378037 CC2D2BQ6DHV5 1058 aa9.09□□□□□ -0.95
CKAP2-203ENST00000378037 TTC16Q8NEE8 873 aa9.09□□□□□ -0.95
CKAP2-203ENST00000378037 SMCR8Q8TEV9 937 aaPredicted RBP9.09□□□□□ -0.95
CKAP2-203ENST00000378037 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.09□□□□□ -0.95
CKAP2-203ENST00000378037 CENPHQ9H3R5 247 aa9.09□□□□□ -0.95
CKAP2-203ENST00000378037 POLR3EQ9NVU0 708 aa9.09□□□□□ -0.95
CKAP2-203ENST00000378037 DDX25Q9UHL0 483 aaKnown RBP9.09□□□□□ -0.95
CKAP2-203ENST00000378037 CCDC169A6NNP5 214 aa9.09□□□□□ -0.95
CKAP2-203ENST00000378037 PSMA7O14818 248 aa9.09□□□□□ -0.95
CKAP2-203ENST00000378037 NLRP12P59046 1061 aa9.09□□□□□ -0.95
CKAP2-203ENST00000378037 TBC1D8BQ0IIM8 1120 aa9.09□□□□□ -0.95
CKAP2-203ENST00000378037 NTRK3Q16288 839 aa9.09□□□□□ -0.95
CKAP2-203ENST00000378037 QRICH1Q2TAL8 776 aa9.09□□□□□ -0.95
CKAP2-203ENST00000378037 TSGA10IPQ3SY00 556 aa9.09□□□□□ -0.95
CKAP2-203ENST00000378037 DALRD3Q5D0E6 543 aaKnown RBP9.09□□□□□ -0.95
CKAP2-203ENST00000378037 CT47A1Q5JQC4 288 aaPredicted RBP9.09□□□□□ -0.95
CKAP2-203ENST00000378037 TCHPQ9BT92 498 aa9.09□□□□□ -0.95
CKAP2-203ENST00000378037 RAB34Q9BZG1 259 aa9.09□□□□□ -0.95
CKAP2-203ENST00000378037 TAOK3Q9H2K8 898 aa9.09□□□□□ -0.95
CKAP2-203ENST00000378037 RGL1Q9NZL6 768 aa9.09□□□□□ -0.95
CKAP2-203ENST00000378037 SDK1Q7Z5N4 2213 aa9.09□□□□□ -0.95
CKAP2-203ENST00000378037 POTEB3A0JP26 581 aa9.09□□□□□ -0.96
CKAP2-203ENST00000378037 POTEFA5A3E0 1075 aa9.09□□□□□ -0.96
CKAP2-203ENST00000378037 POTECB2RU33 542 aa9.09□□□□□ -0.96
CKAP2-203ENST00000378037 POLR3GO15318 223 aaPredicted RBP9.09□□□□□ -0.96
CKAP2-203ENST00000378037 CYTH3O43739 400 aa9.09□□□□□ -0.96
CKAP2-203ENST00000378037 AKR1B10O60218 316 aa9.09□□□□□ -0.96
CKAP2-203ENST00000378037 TBCAO75347 108 aaKnown RBP9.09□□□□□ -0.96
CKAP2-203ENST00000378037 POTEIP0CG38 1075 aa9.09□□□□□ -0.96
CKAP2-203ENST00000378037 SF3A3Q12874 501 aaKnown RBP eCLIP9.09□□□□□ -0.96
CKAP2-203ENST00000378037 MTF1Q14872 753 aa9.09□□□□□ -0.96
CKAP2-203ENST00000378037 RC3H1Q5TC82 1133 aaKnown RBP9.09□□□□□ -0.96
CKAP2-203ENST00000378037 POTEBQ6S5H4 581 aa9.09□□□□□ -0.96
CKAP2-203ENST00000378037 POTEGQ6S5H5 508 aa9.09□□□□□ -0.96
CKAP2-203ENST00000378037 POTEEQ6S8J3 1075 aa9.09□□□□□ -0.96
CKAP2-203ENST00000378037 FBXO11Q86XK2 927 aa9.09□□□□□ -0.96
CKAP2-203ENST00000378037 DNAAF5Q86Y56 855 aa9.09□□□□□ -0.96
CKAP2-203ENST00000378037 RTFDC1Q9BY42 306 aaPredicted RBP9.09□□□□□ -0.96
CKAP2-203ENST00000378037 ZNHIT6Q9NWK9 470 aaKnown RBP9.09□□□□□ -0.96
CKAP2-203ENST00000378037 PI4KBQ9UBF8 816 aa9.09□□□□□ -0.96
CKAP2-203ENST00000378037 ENC1O14682 589 aa9.08□□□□□ -0.96
CKAP2-203ENST00000378037 EGFRP00533 1210 aa9.08□□□□□ -0.96
CKAP2-203ENST00000378037 OR52Z1P0C646 297 aa9.08□□□□□ -0.96
CKAP2-203ENST00000378037 KRT9P35527 623 aa9.08□□□□□ -0.96
CKAP2-203ENST00000378037 PRPF4BQ13523 1007 aaKnown RBP9.08□□□□□ -0.96
CKAP2-203ENST00000378037 CCDC93Q567U6 631 aa9.08□□□□□ -0.96
CKAP2-203ENST00000378037 GADL1Q6ZQY3 521 aa9.08□□□□□ -0.96
CKAP2-203ENST00000378037 PHLDB2Q86SQ0 1253 aa9.08□□□□□ -0.96
CKAP2-203ENST00000378037 BICD1Q96G01 975 aa9.08□□□□□ -0.96
CKAP2-203ENST00000378037 TRERF1Q96PN7 1200 aa9.08□□□□□ -0.96
CKAP2-203ENST00000378037 WRNIP1Q96S55 665 aa9.08□□□□□ -0.96
CKAP2-203ENST00000378037 CCPG1Q9ULG6 757 aa9.08□□□□□ -0.96
CKAP2-203ENST00000378037 USP20Q9Y2K6 914 aa9.08□□□□□ -0.96
CKAP2-203ENST00000378037 ZHX2Q9Y6X8 837 aa9.08□□□□□ -0.96
CKAP2-203ENST00000378037 PHACTR2O75167 634 aa9.08□□□□□ -0.96
CKAP2-203ENST00000378037 RHOXF2BP0C7M4 288 aa9.08□□□□□ -0.96
CKAP2-203ENST00000378037 GJC1P36383 396 aa9.08□□□□□ -0.96
CKAP2-203ENST00000378037 NOP2P46087 812 aaKnown RBP9.08□□□□□ -0.96
CKAP2-203ENST00000378037 CYP2J2P51589 502 aa9.08□□□□□ -0.96
CKAP2-203ENST00000378037 CYP27A1Q02318 531 aa9.08□□□□□ -0.96
CKAP2-203ENST00000378037 RHOXF2Q9BQY4 288 aa9.08□□□□□ -0.96
CKAP2-203ENST00000378037 JADE2Q9NQC1 790 aa9.08□□□□□ -0.96
CKAP2-203ENST00000378037 PICK1Q9NRD5 415 aa9.08□□□□□ -0.96
CKAP2-203ENST00000378037 PCDHA4Q9UN74 947 aa9.08□□□□□ -0.96
CKAP2-203ENST00000378037 MAP1BP46821 2468 aaKnown RBP9.08□□□□□ -0.96
CKAP2-203ENST00000378037 ERICH4A6NGS2 130 aa9.07□□□□□ -0.96
CKAP2-203ENST00000378037 B4DLN1 442 aa9.07□□□□□ -0.96
CKAP2-203ENST00000378037 CBFA2T2O43439 604 aa9.07□□□□□ -0.96
CKAP2-203ENST00000378037 GCNT3O95395 438 aa9.07□□□□□ -0.96
CKAP2-203ENST00000378037 INPP5BP32019 993 aa9.07□□□□□ -0.96
CKAP2-203ENST00000378037 SLC27A3Q5K4L6 730 aa9.07□□□□□ -0.96
CKAP2-203ENST00000378037 SV2BQ7L1I2 683 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms