RNA–Protein interactions for RNA: ENST00000377269.3

UBA1-202, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

TSL 2 BASIC

Gene UBA1, Length 2,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-202ENST00000377269 VSTM4Q8IW00 320 aa16.53■□□□□ 0.24
UBA1-202ENST00000377269 NSUN7Q8NE18 718 aaKnown RBP16.53■□□□□ 0.24
UBA1-202ENST00000377269 MTA3Q9BTC8 594 aa16.53■□□□□ 0.24
UBA1-202ENST00000377269 SIPA1L1O43166 1804 aa16.53■□□□□ 0.24
UBA1-202ENST00000377269 EIF3JO75822 258 aaKnown RBP16.53■□□□□ 0.24
UBA1-202ENST00000377269 LMOD1P29536 600 aaPredicted RBP16.53■□□□□ 0.24
UBA1-202ENST00000377269 NDUFA8P51970 172 aa16.53■□□□□ 0.24
UBA1-202ENST00000377269 TATDN1Q6P1N9 297 aa16.53■□□□□ 0.24
UBA1-202ENST00000377269 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.53■□□□□ 0.24
UBA1-202ENST00000377269 RTEL1Q9NZ71 1219 aa16.53■□□□□ 0.24
UBA1-202ENST00000377269 L1RE1Q9UN81 338 aa16.53■□□□□ 0.24
UBA1-202ENST00000377269 GOLGA8AA7E2F4 631 aa16.52■□□□□ 0.24
UBA1-202ENST00000377269 TROAPQ12815 778 aa16.52■□□□□ 0.24
UBA1-202ENST00000377269 CERKLQ49MI3 558 aaPredicted RBP16.52■□□□□ 0.24
UBA1-202ENST00000377269 TMTC2Q8N394 836 aa16.52■□□□□ 0.24
UBA1-202ENST00000377269 CCDC82Q8N4S0 544 aa16.52■□□□□ 0.24
UBA1-202ENST00000377269 A0A1B0GVL5 298 aa16.52■□□□□ 0.23
UBA1-202ENST00000377269 GLTPD2A6NH11 291 aa16.52■□□□□ 0.23
UBA1-202ENST00000377269 UBE2Q2LH0YL09 131 aa16.52■□□□□ 0.23
UBA1-202ENST00000377269 POTEB2H3BUK9 544 aa16.52■□□□□ 0.23
UBA1-202ENST00000377269 ATP1A3P13637 1013 aa16.52■□□□□ 0.23
UBA1-202ENST00000377269 UBASH3AP57075 661 aa16.52■□□□□ 0.23
UBA1-202ENST00000377269 LRRC31Q6UY01 552 aa16.52■□□□□ 0.23
UBA1-202ENST00000377269 DGKHQ86XP1 1220 aa16.52■□□□□ 0.23
UBA1-202ENST00000377269 FAM177A1Q8N128 213 aaPredicted RBP16.52■□□□□ 0.23
UBA1-202ENST00000377269 DHX58Q96C10 678 aa16.52■□□□□ 0.23
UBA1-202ENST00000377269 TMEM47Q9BQJ4 181 aa16.52■□□□□ 0.23
UBA1-202ENST00000377269 TCP11L1Q9NUJ3 509 aa16.52■□□□□ 0.23
UBA1-202ENST00000377269 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.52■□□□□ 0.23
UBA1-202ENST00000377269 FZD1Q9UP38 647 aa16.52■□□□□ 0.23
UBA1-202ENST00000377269 PTPDC1A2A3K4 754 aa16.51■□□□□ 0.23
UBA1-202ENST00000377269 GSCP56915 257 aaPredicted RBP16.51■□□□□ 0.23
UBA1-202ENST00000377269 NBPF12Q5TAG4 269 aaPredicted RBP16.51■□□□□ 0.23
UBA1-202ENST00000377269 EFCAB13Q8IY85 973 aa16.51■□□□□ 0.23
UBA1-202ENST00000377269 MSANTD4Q8NCY6 345 aa16.51■□□□□ 0.23
UBA1-202ENST00000377269 ANKZF1Q9H8Y5 726 aa16.51■□□□□ 0.23
UBA1-202ENST00000377269 ADARB2Q9NS39 739 aaKnown RBP16.51■□□□□ 0.23
UBA1-202ENST00000377269 RNF216Q9NWF9 866 aaPredicted RBP16.51■□□□□ 0.23
UBA1-202ENST00000377269 FAN1Q9Y2M0 1017 aa16.51■□□□□ 0.23
UBA1-202ENST00000377269 TNNI2P48788 182 aa16.51■□□□□ 0.23
UBA1-202ENST00000377269 TNFAIP1Q13829 316 aa16.51■□□□□ 0.23
UBA1-202ENST00000377269 MCM6Q14566 821 aa16.51■□□□□ 0.23
UBA1-202ENST00000377269 AXDND1Q5T1B0 1012 aaPredicted RBP16.51■□□□□ 0.23
UBA1-202ENST00000377269 SYNE3Q6ZMZ3 975 aa16.51■□□□□ 0.23
UBA1-202ENST00000377269 MMS22LQ6ZRQ5 1243 aa16.51■□□□□ 0.23
UBA1-202ENST00000377269 FANCBQ8NB91 859 aa16.51■□□□□ 0.23
UBA1-202ENST00000377269 PHKBQ93100 1093 aa16.51■□□□□ 0.23
UBA1-202ENST00000377269 MTMR4Q9NYA4 1195 aa16.51■□□□□ 0.23
UBA1-202ENST00000377269 MCTP2Q6DN12 878 aa16.5■□□□□ 0.23
UBA1-202ENST00000377269 SRGAP1Q7Z6B7 1085 aa16.5■□□□□ 0.23
UBA1-202ENST00000377269 CATIPQ7Z7H3 387 aa16.5■□□□□ 0.23
UBA1-202ENST00000377269 PNMA1Q8ND90 353 aa16.5■□□□□ 0.23
UBA1-202ENST00000377269 CEP89Q96ST8 783 aa16.5■□□□□ 0.23
UBA1-202ENST00000377269 KAT14Q9H8E8 782 aa16.5■□□□□ 0.23
UBA1-202ENST00000377269 MYH15Q9Y2K3 1946 aa16.5■□□□□ 0.23
UBA1-202ENST00000377269 IGKV6D-41A0A0C4DH26 115 aa16.5■□□□□ 0.23
UBA1-202ENST00000377269 CPLX1O14810 134 aa16.5■□□□□ 0.23
UBA1-202ENST00000377269 CLGNO14967 610 aa16.5■□□□□ 0.23
UBA1-202ENST00000377269 GH2P01242 217 aa16.5■□□□□ 0.23
UBA1-202ENST00000377269 TOP1P11387 765 aaKnown RBP16.5■□□□□ 0.23
UBA1-202ENST00000377269 FDPSP14324 419 aaKnown RBP16.5■□□□□ 0.23
UBA1-202ENST00000377269 FOSBP53539 338 aa16.5■□□□□ 0.23
UBA1-202ENST00000377269 CHMP4BP1P59074 171 aa16.5■□□□□ 0.23
UBA1-202ENST00000377269 TUBB4BP68371 445 aa16.5■□□□□ 0.23
UBA1-202ENST00000377269 ATP2B2Q01814 1243 aa16.5■□□□□ 0.23
UBA1-202ENST00000377269 SEPT2Q15019 361 aa16.5■□□□□ 0.23
UBA1-202ENST00000377269 FAM71BQ8TC56 605 aa16.5■□□□□ 0.23
UBA1-202ENST00000377269 L3MBTL3Q96JM7 780 aaPredicted RBP16.5■□□□□ 0.23
UBA1-202ENST00000377269 HERC5Q9UII4 1024 aaKnown RBP16.5■□□□□ 0.23
UBA1-202ENST00000377269 COL2A1P02458 1487 aaPredicted RBP16.49■□□□□ 0.23
UBA1-202ENST00000377269 POTECB2RU33 542 aa16.49■□□□□ 0.23
UBA1-202ENST00000377269 STX10O60499 249 aa16.49■□□□□ 0.23
UBA1-202ENST00000377269 N4BP1O75113 896 aaKnown RBP16.49■□□□□ 0.23
UBA1-202ENST00000377269 ERLIN1O75477 346 aa16.49■□□□□ 0.23
UBA1-202ENST00000377269 GUCY1A2P33402 732 aa16.49■□□□□ 0.23
UBA1-202ENST00000377269 NTRK3Q16288 839 aa16.49■□□□□ 0.23
UBA1-202ENST00000377269 RTN1Q16799 776 aa16.49■□□□□ 0.23
UBA1-202ENST00000377269 CCDC91Q7Z6B0 441 aa16.49■□□□□ 0.23
UBA1-202ENST00000377269 LRRC47Q8N1G4 583 aaKnown RBP16.49■□□□□ 0.23
UBA1-202ENST00000377269 LINC00301Q8NCQ3 95 aa16.49■□□□□ 0.23
UBA1-202ENST00000377269 ANKS1AQ92625 1134 aa16.49■□□□□ 0.23
UBA1-202ENST00000377269 BIN1O00499 593 aa16.48■□□□□ 0.23
UBA1-202ENST00000377269 CUTAO60888 179 aa16.48■□□□□ 0.23
UBA1-202ENST00000377269 PPFIA4O75335 1185 aa16.48■□□□□ 0.23
UBA1-202ENST00000377269 TBX2Q13207 712 aaPredicted RBP16.48■□□□□ 0.23
UBA1-202ENST00000377269 ABCB5Q2M3G0 1257 aa16.48■□□□□ 0.23
UBA1-202ENST00000377269 BAG1Q99933 345 aaPredicted RBP16.48■□□□□ 0.23
UBA1-202ENST00000377269 PLEKHA8P1O95397 391 aa16.48■□□□□ 0.23
UBA1-202ENST00000377269 SERPINC1P01008 464 aa16.48■□□□□ 0.23
UBA1-202ENST00000377269 SIAH1Q8IUQ4 282 aa16.48■□□□□ 0.23
UBA1-202ENST00000377269 CCDC17Q96LX7 622 aa16.48■□□□□ 0.23
UBA1-202ENST00000377269 PLIN4Q96Q06 1357 aa16.48■□□□□ 0.23
UBA1-202ENST00000377269 A0A087WUV0 522 aaPredicted RBP16.47■□□□□ 0.23
UBA1-202ENST00000377269 EPHX2P34913 555 aa16.47■□□□□ 0.23
UBA1-202ENST00000377269 NOVP48745 357 aa16.47■□□□□ 0.23
UBA1-202ENST00000377269 GOLGA8FQ08AF8 430 aa16.47■□□□□ 0.23
UBA1-202ENST00000377269 GOLGA8DPQ0D2H9 430 aa16.47■□□□□ 0.23
UBA1-202ENST00000377269 CCDC84Q86UT8 332 aaPredicted RBP16.47■□□□□ 0.23
UBA1-202ENST00000377269 AIFM3Q96NN9 605 aa16.47■□□□□ 0.23
UBA1-202ENST00000377269 GJB4Q9NTQ9 266 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 116.4 ms