RNA–Protein interactions for RNA: ENST00000377197.7

C9orf135-201, Transcript of chromosome 9 open reading frame 135, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf135, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf135-201ENST00000377197 NEFLP07196 543 aa11.97□□□□□ -0.49
C9orf135-201ENST00000377197 ELNP15502 786 aa11.97□□□□□ -0.49
C9orf135-201ENST00000377197 CCNA1P78396 465 aa11.97□□□□□ -0.49
C9orf135-201ENST00000377197 SKOR1P84550 965 aa11.97□□□□□ -0.49
C9orf135-201ENST00000377197 PDE4BQ07343 736 aa11.97□□□□□ -0.49
C9orf135-201ENST00000377197 PTPRNQ16849 979 aa11.97□□□□□ -0.49
C9orf135-201ENST00000377197 KIAA1755Q5JYT7 1200 aa11.97□□□□□ -0.49
C9orf135-201ENST00000377197 VPS53Q5VIR6 699 aa11.97□□□□□ -0.49
C9orf135-201ENST00000377197 ZNF444Q8N0Y2 327 aaPredicted RBP11.97□□□□□ -0.49
C9orf135-201ENST00000377197 TSC1Q92574 1164 aa11.97□□□□□ -0.49
C9orf135-201ENST00000377197 DPF3Q92784 378 aa11.97□□□□□ -0.49
C9orf135-201ENST00000377197 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.97□□□□□ -0.49
C9orf135-201ENST00000377197 CWC22Q9HCG8 908 aaKnown RBP11.97□□□□□ -0.49
C9orf135-201ENST00000377197 ZMYM6O95789 1325 aa11.96□□□□□ -0.49
C9orf135-201ENST00000377197 RAD21O60216 631 aa11.96□□□□□ -0.49
C9orf135-201ENST00000377197 FLOT1O75955 427 aa11.96□□□□□ -0.49
C9orf135-201ENST00000377197 INHAP05111 366 aa11.96□□□□□ -0.49
C9orf135-201ENST00000377197 TSPY3P0CV98 308 aa11.96□□□□□ -0.49
C9orf135-201ENST00000377197 TSPY8P0CW00 308 aa11.96□□□□□ -0.49
C9orf135-201ENST00000377197 PRKCSHP14314 528 aaPredicted RBP11.96□□□□□ -0.49
C9orf135-201ENST00000377197 SDSP20132 328 aa11.96□□□□□ -0.49
C9orf135-201ENST00000377197 MFAP1P55081 439 aaKnown RBP11.96□□□□□ -0.49
C9orf135-201ENST00000377197 COG2Q14746 738 aa11.96□□□□□ -0.49
C9orf135-201ENST00000377197 MTFR1Q15390 333 aa11.96□□□□□ -0.49
C9orf135-201ENST00000377197 GPR142Q7Z601 462 aa11.96□□□□□ -0.49
C9orf135-201ENST00000377197 ZNF589Q86UQ0 364 aaPredicted RBP11.96□□□□□ -0.49
C9orf135-201ENST00000377197 PORCNQ9H237 461 aa11.96□□□□□ -0.49
C9orf135-201ENST00000377197 BTBD7Q9P203 1132 aa11.96□□□□□ -0.49
C9orf135-201ENST00000377197 IGKV6D-41A0A0C4DH26 115 aa11.95□□□□□ -0.5
C9orf135-201ENST00000377197 HIP1O00291 1037 aa11.95□□□□□ -0.5
C9orf135-201ENST00000377197 HSPD1P10809 573 aaKnown RBP11.95□□□□□ -0.5
C9orf135-201ENST00000377197 CCL5P13501 91 aa11.95□□□□□ -0.5
C9orf135-201ENST00000377197 CTDSPL2Q05D32 466 aa11.95□□□□□ -0.5
C9orf135-201ENST00000377197 TUSC1Q2TAM9 212 aa11.95□□□□□ -0.5
C9orf135-201ENST00000377197 DESI1Q6ICB0 168 aa11.95□□□□□ -0.5
C9orf135-201ENST00000377197 PLEKHH3Q7Z736 793 aa11.95□□□□□ -0.5
C9orf135-201ENST00000377197 MB21D1Q8N884 522 aa11.95□□□□□ -0.5
C9orf135-201ENST00000377197 CEP95Q96GE4 821 aa11.95□□□□□ -0.5
C9orf135-201ENST00000377197 DIAPH3Q9NSV4 1193 aa11.95□□□□□ -0.5
C9orf135-201ENST00000377197 HOXC10Q9NYD6 342 aa11.95□□□□□ -0.5
C9orf135-201ENST00000377197 NYAP2Q9P242 653 aa11.95□□□□□ -0.5
C9orf135-201ENST00000377197 ANAPC4Q9UJX5 808 aa11.95□□□□□ -0.5
C9orf135-201ENST00000377197 GJD2Q9UKL4 321 aa11.95□□□□□ -0.5
C9orf135-201ENST00000377197 TTLL1O95922 423 aa11.94□□□□□ -0.5
C9orf135-201ENST00000377197 HMGCRP04035 888 aa11.94□□□□□ -0.5
C9orf135-201ENST00000377197 ALX1Q15699 326 aa11.94□□□□□ -0.5
C9orf135-201ENST00000377197 FAM47AQ5JRC9 791 aa11.94□□□□□ -0.5
C9orf135-201ENST00000377197 FAM83BQ5T0W9 1011 aa11.94□□□□□ -0.5
C9orf135-201ENST00000377197 WDR78Q5VTH9 848 aa11.94□□□□□ -0.5
C9orf135-201ENST00000377197 LYPD8Q6UX82 237 aa11.94□□□□□ -0.5
C9orf135-201ENST00000377197 NEDD1Q8NHV4 660 aa11.94□□□□□ -0.5
C9orf135-201ENST00000377197 ATG4CQ96DT6 458 aa11.94□□□□□ -0.5
C9orf135-201ENST00000377197 HTATIP2Q9BUP3 242 aa11.94□□□□□ -0.5
C9orf135-201ENST00000377197 RNF208Q9H0X6 261 aa11.94□□□□□ -0.5
C9orf135-201ENST00000377197 EVA1BQ9NVM1 165 aa11.94□□□□□ -0.5
C9orf135-201ENST00000377197 MTMR4Q9NYA4 1195 aa11.94□□□□□ -0.5
C9orf135-201ENST00000377197 SYNPO2Q9UMS6 1093 aa11.94□□□□□ -0.5
C9orf135-201ENST00000377197 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.94□□□□□ -0.5
C9orf135-201ENST00000377197 TSPY2A6NKD2 308 aa11.93□□□□□ -0.5
C9orf135-201ENST00000377197 DLL1O00548 723 aa11.93□□□□□ -0.5
C9orf135-201ENST00000377197 NDUFB10O96000 172 aa11.93□□□□□ -0.5
C9orf135-201ENST00000377197 FGAP02671 866 aa11.93□□□□□ -0.5
C9orf135-201ENST00000377197 GSPT1P15170 499 aaKnown RBP11.93□□□□□ -0.5
C9orf135-201ENST00000377197 CYP2B6P20813 491 aa11.93□□□□□ -0.5
C9orf135-201ENST00000377197 RGS2P41220 211 aa11.93□□□□□ -0.5
C9orf135-201ENST00000377197 TFAP4Q01664 338 aa11.93□□□□□ -0.5
C9orf135-201ENST00000377197 SKIV2LQ15477 1246 aaKnown RBP11.93□□□□□ -0.5
C9orf135-201ENST00000377197 TTC22Q5TAA0 569 aa11.93□□□□□ -0.5
C9orf135-201ENST00000377197 CWC27Q6UX04 472 aaKnown RBP11.93□□□□□ -0.5
C9orf135-201ENST00000377197 LRRC47Q8N1G4 583 aaKnown RBP11.93□□□□□ -0.5
C9orf135-201ENST00000377197 SLC17A8Q8NDX2 589 aa11.93□□□□□ -0.5
C9orf135-201ENST00000377197 TRIB2Q92519 343 aa11.93□□□□□ -0.5
C9orf135-201ENST00000377197 APBA2Q99767 749 aa11.93□□□□□ -0.5
C9orf135-201ENST00000377197 SPATC1LQ9H0A9 340 aa11.93□□□□□ -0.5
C9orf135-201ENST00000377197 UNC93B1Q9H1C4 597 aa11.93□□□□□ -0.5
C9orf135-201ENST00000377197 CLIP2Q9UDT6 1046 aa11.93□□□□□ -0.5
C9orf135-201ENST00000377197 IVNS1ABPQ9Y6Y0 642 aa11.93□□□□□ -0.5
C9orf135-201ENST00000377197 ALPK3Q96L96 1907 aa11.93□□□□□ -0.5
C9orf135-201ENST00000377197 F5H6K3 240 aa11.92□□□□□ -0.5
C9orf135-201ENST00000377197 ORC4O43929 436 aa11.92□□□□□ -0.5
C9orf135-201ENST00000377197 GJB1P08034 283 aa11.92□□□□□ -0.5
C9orf135-201ENST00000377197 XRCC5P13010 732 aaKnown RBP11.92□□□□□ -0.5
C9orf135-201ENST00000377197 ZKSCAN1P17029 563 aaPredicted RBP11.92□□□□□ -0.5
C9orf135-201ENST00000377197 GJA8P48165 433 aa11.92□□□□□ -0.5
C9orf135-201ENST00000377197 KLRC3Q07444 240 aa11.92□□□□□ -0.5
C9orf135-201ENST00000377197 KCNH2Q12809 1159 aa11.92□□□□□ -0.5
C9orf135-201ENST00000377197 GRB14Q14449 540 aa11.92□□□□□ -0.5
C9orf135-201ENST00000377197 PLS1Q14651 629 aa11.92□□□□□ -0.5
C9orf135-201ENST00000377197 ERICH6BQ5W0A0 696 aa11.92□□□□□ -0.5
C9orf135-201ENST00000377197 TRAF7Q6Q0C0 670 aa11.92□□□□□ -0.5
C9orf135-201ENST00000377197 TRMT44Q8IYL2 757 aaKnown RBP11.92□□□□□ -0.5
C9orf135-201ENST00000377197 USP6NLQ92738 828 aa11.92□□□□□ -0.5
C9orf135-201ENST00000377197 MKL1Q969V6 931 aa11.92□□□□□ -0.5
C9orf135-201ENST00000377197 SHISA4Q96DD7 197 aa11.92□□□□□ -0.5
C9orf135-201ENST00000377197 NUP88Q99567 741 aaPredicted RBP11.92□□□□□ -0.5
C9orf135-201ENST00000377197 MOV10L1Q9BXT6 1211 aaKnown RBP11.92□□□□□ -0.5
C9orf135-201ENST00000377197 TOMM22Q9NS69 142 aa11.92□□□□□ -0.5
C9orf135-201ENST00000377197 FBXO28Q9NVF7 368 aa11.92□□□□□ -0.5
C9orf135-201ENST00000377197 MAP10Q9P2G4 905 aa11.92□□□□□ -0.5
C9orf135-201ENST00000377197 PPP1R9AQ9ULJ8 1098 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms