RNA–Protein interactions for RNA: ENST00000375851.6

C9orf47-203, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf47, Length 4,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-203ENST00000375851 BRIP1Q9BX63 1249 aa15.03■□□□□ -0
C9orf47-203ENST00000375851 MLXIPQ9HAP2 919 aa15.03■□□□□ -0
C9orf47-203ENST00000375851 EPN1Q9Y6I3 576 aaPredicted RBP15.03■□□□□ -0
C9orf47-203ENST00000375851 CDHR2Q9BYE9 1310 aa15.03■□□□□ -0
C9orf47-203ENST00000375851 ABCB4P21439 1286 aa15.03■□□□□ -0
C9orf47-203ENST00000375851 PRDX5P30044 214 aa15.03■□□□□ -0
C9orf47-203ENST00000375851 POLR2FP61218 127 aaKnown RBP15.03■□□□□ -0
C9orf47-203ENST00000375851 DGKHQ86XP1 1220 aa15.03■□□□□ -0
C9orf47-203ENST00000375851 ANKRD35Q8N283 1001 aa15.03■□□□□ -0
C9orf47-203ENST00000375851 DHX36Q9H2U1 1008 aaKnown RBP15.03■□□□□ -0
C9orf47-203ENST00000375851 BCL2L12Q9HB09 334 aa15.03■□□□□ -0
C9orf47-203ENST00000375851 PNMA2Q9UL42 364 aa15.03■□□□□ -0
C9orf47-203ENST00000375851 ZNF215Q9UL58 517 aaPredicted RBP15.03■□□□□ -0
C9orf47-203ENST00000375851 RABGAP1Q9Y3P9 1069 aa15.03■□□□□ -0
C9orf47-203ENST00000375851 RPAP1Q9BWH6 1393 aaPredicted RBP15.03■□□□□ -0
C9orf47-203ENST00000375851 SETBP1Q9Y6X0 1596 aa15.03■□□□□ -0
C9orf47-203ENST00000375851 E9PCH4 1651 aa15.03■□□□□ -0
C9orf47-203ENST00000375851 K7ENM7 598 aa15.03■□□□□ -0
C9orf47-203ENST00000375851 ASIC3Q9UHC3 531 aa15.03■□□□□ -0
C9orf47-203ENST00000375851 ERCC6LQ2NKX8 1250 aa15.02■□□□□ -0
C9orf47-203ENST00000375851 SRPRBQ9Y5M8 271 aaKnown RBP15.02■□□□□ -0
C9orf47-203ENST00000375851 TNS3Q68CZ2 1445 aa15.02■□□□□ -0
C9orf47-203ENST00000375851 GCFC2P16383 781 aaKnown RBP15.02□□□□□ -0.01
C9orf47-203ENST00000375851 CASP14P31944 242 aa15.02□□□□□ -0.01
C9orf47-203ENST00000375851 CCDC121Q6ZUS5 278 aa15.02□□□□□ -0.01
C9orf47-203ENST00000375851 TBC1D10CQ8IV04 446 aa15.02□□□□□ -0.01
C9orf47-203ENST00000375851 CNOT6LQ96LI5 555 aaKnown RBP15.02□□□□□ -0.01
C9orf47-203ENST00000375851 PI4KBQ9UBF8 816 aa15.02□□□□□ -0.01
C9orf47-203ENST00000375851 FERP16591 822 aa15.02□□□□□ -0.01
C9orf47-203ENST00000375851 CDK8P49336 464 aa15.02□□□□□ -0.01
C9orf47-203ENST00000375851 PAK2Q13177 524 aa15.02□□□□□ -0.01
C9orf47-203ENST00000375851 LRCH2Q5VUJ6 765 aa15.02□□□□□ -0.01
C9orf47-203ENST00000375851 SND1Q7KZF4 910 aaKnown RBP eCLIP15.02□□□□□ -0.01
C9orf47-203ENST00000375851 RPGRIP1Q96KN7 1286 aa15.02□□□□□ -0.01
C9orf47-203ENST00000375851 BMP3P12645 472 aa15.01□□□□□ -0.01
C9orf47-203ENST00000375851 TRIM28Q13263 835 aaKnown RBP15.01□□□□□ -0.01
C9orf47-203ENST00000375851 ODR4Q5SWX8 454 aa15.01□□□□□ -0.01
C9orf47-203ENST00000375851 CELF1Q92879 486 aaKnown RBP15.01□□□□□ -0.01
C9orf47-203ENST00000375851 FAM169AQ9Y6X4 670 aa15.01□□□□□ -0.01
C9orf47-203ENST00000375851 ARHGEF40Q8TER5 1519 aa15.01□□□□□ -0.01
C9orf47-203ENST00000375851 RAD17O75943 681 aa15.01□□□□□ -0.01
C9orf47-203ENST00000375851 MMP10P09238 476 aa15.01□□□□□ -0.01
C9orf47-203ENST00000375851 MNAT1P51948 309 aa15.01□□□□□ -0.01
C9orf47-203ENST00000375851 UBXN2AP68543 259 aa15.01□□□□□ -0.01
C9orf47-203ENST00000375851 QRICH2Q9H0J4 1663 aa15.01□□□□□ -0.01
C9orf47-203ENST00000375851 PSDA5PKW4 1024 aaPredicted RBP15.01□□□□□ -0.01
C9orf47-203ENST00000375851 PLEKHA8P1O95397 391 aa15.01□□□□□ -0.01
C9orf47-203ENST00000375851 KIAA1524Q8TCG1 905 aa15.01□□□□□ -0.01
C9orf47-203ENST00000375851 AFAP1L1Q8TED9 768 aa15.01□□□□□ -0.01
C9orf47-203ENST00000375851 CACTINQ8WUQ7 758 aaKnown RBP15.01□□□□□ -0.01
C9orf47-203ENST00000375851 STAG1Q8WVM7 1258 aa15.01□□□□□ -0.01
C9orf47-203ENST00000375851 CCDC127Q96BQ5 260 aa15.01□□□□□ -0.01
C9orf47-203ENST00000375851 COA1Q9GZY4 146 aa15.01□□□□□ -0.01
C9orf47-203ENST00000375851 NKIRAS1Q9NYS0 192 aa15.01□□□□□ -0.01
C9orf47-203ENST00000375851 AMFRQ9UKV5 643 aa15.01□□□□□ -0.01
C9orf47-203ENST00000375851 CROCC2H7BZ55 1655 aa15.01□□□□□ -0.01
C9orf47-203ENST00000375851 hCG_1984214I3L0E3 225 aa15.01□□□□□ -0.01
C9orf47-203ENST00000375851 EAPPQ56P03 285 aaPredicted RBP15.01□□□□□ -0.01
C9orf47-203ENST00000375851 ZNF713Q8N859 430 aaPredicted RBP15.01□□□□□ -0.01
C9orf47-203ENST00000375851 DHTKD1Q96HY7 919 aaPredicted RBP15.01□□□□□ -0.01
C9orf47-203ENST00000375851 MAN1B1Q9UKM7 699 aa15.01□□□□□ -0.01
C9orf47-203ENST00000375851 LMTK2Q8IWU2 1503 aa15.01□□□□□ -0.01
C9orf47-203ENST00000375851 WHAMMP3Q1A5X7 153 aa15□□□□□ -0.01
C9orf47-203ENST00000375851 CCDC105Q8IYK2 499 aa15□□□□□ -0.01
C9orf47-203ENST00000375851 EPSTI1Q96J88 318 aa15□□□□□ -0.01
C9orf47-203ENST00000375851 FAM204AQ9H8W3 233 aa15□□□□□ -0.01
C9orf47-203ENST00000375851 GOLGA6BA6NDN3 693 aa15□□□□□ -0.01
C9orf47-203ENST00000375851 PABPN1LA6NDY0 278 aaKnown RBP15□□□□□ -0.01
C9orf47-203ENST00000375851 SORBS3O60504 671 aa15□□□□□ -0.01
C9orf47-203ENST00000375851 LIG4P49917 911 aa15□□□□□ -0.01
C9orf47-203ENST00000375851 MXRA7P84157 204 aa15□□□□□ -0.01
C9orf47-203ENST00000375851 ABCA9Q8IUA7 1624 aa15□□□□□ -0.01
C9orf47-203ENST00000375851 NPR1P16066 1061 aa15□□□□□ -0.01
C9orf47-203ENST00000375851 RXRBP28702 533 aa15□□□□□ -0.01
C9orf47-203ENST00000375851 ARMCX5Q6P1M9 558 aa15□□□□□ -0.01
C9orf47-203ENST00000375851 ARHGAP27Q6ZUM4 889 aa15□□□□□ -0.01
C9orf47-203ENST00000375851 ANKRD13CQ8N6S4 541 aa15□□□□□ -0.01
C9orf47-203ENST00000375851 P2RX5Q93086 422 aa15□□□□□ -0.01
C9orf47-203ENST00000375851 GDAP1L1Q96MZ0 367 aa15□□□□□ -0.01
C9orf47-203ENST00000375851 SAMD15Q9P1V8 674 aa15□□□□□ -0.01
C9orf47-203ENST00000375851 ABCC12Q96J65 1359 aa15□□□□□ -0.01
C9orf47-203ENST00000375851 GOLGA6CA6NDK9 693 aa15□□□□□ -0.01
C9orf47-203ENST00000375851 GOLGA6DP0CG33 693 aa15□□□□□ -0.01
C9orf47-203ENST00000375851 EEF1GP26641 437 aaKnown RBP15□□□□□ -0.01
C9orf47-203ENST00000375851 ZNF772Q68DY9 489 aaPredicted RBP15□□□□□ -0.01
C9orf47-203ENST00000375851 SULF1Q8IWU6 871 aa15□□□□□ -0.01
C9orf47-203ENST00000375851 GOLGA6AQ9NYA3 693 aa15□□□□□ -0.01
C9orf47-203ENST00000375851 SSX2IPQ9Y2D8 614 aa15□□□□□ -0.01
C9orf47-203ENST00000375851 H2AFZP0C0S5 128 aa14.99□□□□□ -0.01
C9orf47-203ENST00000375851 FOXO4P98177 505 aa14.99□□□□□ -0.01
C9orf47-203ENST00000375851 H2AFVQ71UI9 128 aa14.99□□□□□ -0.01
C9orf47-203ENST00000375851 SUGCTQ9HAC7 445 aa14.99□□□□□ -0.01
C9orf47-203ENST00000375851 CYP2D6P10635 497 aa14.99□□□□□ -0.01
C9orf47-203ENST00000375851 SNX16P57768 344 aa14.99□□□□□ -0.01
C9orf47-203ENST00000375851 LRRC41Q15345 812 aa14.99□□□□□ -0.01
C9orf47-203ENST00000375851 UAP1Q16222 522 aaPredicted RBP14.99□□□□□ -0.01
C9orf47-203ENST00000375851 TAF12Q16514 161 aa14.99□□□□□ -0.01
C9orf47-203ENST00000375851 PTPN21Q16825 1174 aa14.99□□□□□ -0.01
C9orf47-203ENST00000375851 METTL13Q8N6R0 699 aa14.99□□□□□ -0.01
C9orf47-203ENST00000375851 ENOX1Q8TC92 643 aaKnown RBP14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms