RNA–Protein interactions for RNA: ENST00000374379.8

CLIC4-201, Transcript of chloride intracellular channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC4, Length 4,346 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-201ENST00000374379 VEGFAP15692 232 aaPredicted RBP15.11■□□□□ 0.01
CLIC4-201ENST00000374379 PABPC4Q13310 644 aaKnown RBP eCLIP15.11■□□□□ 0.018e-11■■■■■ 42.4
CLIC4-201ENST00000374379 TXLNBQ8N3L3 684 aa15.11■□□□□ 0.01
CLIC4-201ENST00000374379 NAPGQ99747 312 aaPredicted RBP15.11■□□□□ 0.01
CLIC4-201ENST00000374379 SCAF8Q9UPN6 1271 aaKnown RBP15.11■□□□□ 0.01
CLIC4-201ENST00000374379 SALL1Q9NSC2 1324 aa15.11■□□□□ 0.01
CLIC4-201ENST00000374379 C21orf2O43822 256 aa15.11■□□□□ 0.01
CLIC4-201ENST00000374379 STX10O60499 249 aa15.11■□□□□ 0.01
CLIC4-201ENST00000374379 PRCPP42785 496 aa15.11■□□□□ 0.01
CLIC4-201ENST00000374379 TOGARAM2Q6ZUX3 1019 aa15.11■□□□□ 0.01
CLIC4-201ENST00000374379 JAKMIP2Q96AA8 810 aa15.11■□□□□ 0.01
CLIC4-201ENST00000374379 CNOT6LQ96LI5 555 aaKnown RBP15.11■□□□□ 0.01
CLIC4-201ENST00000374379 SPTLC3Q9NUV7 552 aa15.11■□□□□ 0.01
CLIC4-201ENST00000374379 PSDA5PKW4 1024 aaPredicted RBP15.1■□□□□ 0.01
CLIC4-201ENST00000374379 LEKR1Q6ZMV7 388 aa15.1■□□□□ 0.01
CLIC4-201ENST00000374379 IRX2Q9BZI1 471 aaPredicted RBP15.1■□□□□ 0.01
CLIC4-201ENST00000374379 EHMT1Q9H9B1 1298 aa15.1■□□□□ 0.01
CLIC4-201ENST00000374379 ARHGEF10LQ9HCE6 1279 aa15.1■□□□□ 0.01
CLIC4-201ENST00000374379 PCDHB13Q9Y5F0 798 aa15.1■□□□□ 0.01
CLIC4-201ENST00000374379 USP17L10C9JJH3 530 aa15.1■□□□□ 0.01
CLIC4-201ENST00000374379 LMAN1P49257 510 aa15.1■□□□□ 0.01
CLIC4-201ENST00000374379 TTLL12Q14166 644 aaPredicted RBP15.1■□□□□ 0.01
CLIC4-201ENST00000374379 ZNF658Q5TYW1 1059 aaPredicted RBP15.1■□□□□ 0.01
CLIC4-201ENST00000374379 NSMFQ6X4W1 530 aa15.1■□□□□ 0.01
CLIC4-201ENST00000374379 GBP3Q9H0R5 595 aa15.1■□□□□ 0.01
CLIC4-201ENST00000374379 EPC1Q9H2F5 836 aa15.1■□□□□ 0.01
CLIC4-201ENST00000374379 SORBS3O60504 671 aa15.1■□□□□ 0.01
CLIC4-201ENST00000374379 MYCLP12524 364 aaPredicted RBP15.1■□□□□ 0.01
CLIC4-201ENST00000374379 CHRNA5P30532 468 aa15.1■□□□□ 0.01
CLIC4-201ENST00000374379 GRIK5Q16478 980 aa15.1■□□□□ 0.01
CLIC4-201ENST00000374379 POTEDQ86YR6 584 aa15.1■□□□□ 0.01
CLIC4-201ENST00000374379 CEP112Q8N8E3 955 aa15.1■□□□□ 0.01
CLIC4-201ENST00000374379 LARP4BQ92615 738 aaKnown RBP15.1■□□□□ 0.01
CLIC4-201ENST00000374379 DNM3Q9UQ16 869 aa15.1■□□□□ 0.01
CLIC4-201ENST00000374379 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.1■□□□□ 0.01
CLIC4-201ENST00000374379 TDP2O95551 362 aa15.09■□□□□ 0.01
CLIC4-201ENST00000374379 FBXO11Q86XK2 927 aa15.09■□□□□ 0.01
CLIC4-201ENST00000374379 COA1Q9GZY4 146 aa15.09■□□□□ 0.01
CLIC4-201ENST00000374379 TMEM60Q9H2L4 133 aa15.09■□□□□ 0.01
CLIC4-201ENST00000374379 CNTNAP5Q8WYK1 1306 aa15.09■□□□□ 0.01
CLIC4-201ENST00000374379 GCNT3O95395 438 aa15.09■□□□□ 0.01
CLIC4-201ENST00000374379 SEC23AQ15436 765 aa15.09■□□□□ 0.01
CLIC4-201ENST00000374379 RC3H1Q5TC82 1133 aaKnown RBP15.09■□□□□ 0.01
CLIC4-201ENST00000374379 ZNF579Q8NAF0 562 aaKnown RBP15.09■□□□□ 0.01
CLIC4-201ENST00000374379 MAP3K14Q99558 947 aa15.09■□□□□ 0.01
CLIC4-201ENST00000374379 DAGLAQ9Y4D2 1042 aa15.09■□□□□ 0.01
CLIC4-201ENST00000374379 RGPD1P0DJD0 1748 aa15.09■□□□□ 0.01
CLIC4-201ENST00000374379 RASA1P20936 1047 aa15.09■□□□□ 0.01
CLIC4-201ENST00000374379 CCZ1BP86790 482 aa15.09■□□□□ 0.01
CLIC4-201ENST00000374379 CCZ1P86791 482 aaPredicted RBP15.09■□□□□ 0.01
CLIC4-201ENST00000374379 CYP27A1Q02318 531 aa15.09■□□□□ 0.01
CLIC4-201ENST00000374379 SEPT2Q15019 361 aa15.09■□□□□ 0.01
CLIC4-201ENST00000374379 ASPRV1Q53RT3 343 aa15.09■□□□□ 0.01
CLIC4-201ENST00000374379 GALNT17Q6IS24 598 aa15.09■□□□□ 0.01
CLIC4-201ENST00000374379 SLC51AQ86UW1 340 aa15.09■□□□□ 0.01
CLIC4-201ENST00000374379 KIF1AQ12756 1690 aa15.09■□□□□ 0.01
CLIC4-201ENST00000374379 FLT1P17948 1338 aa15.09■□□□□ 0.01
CLIC4-201ENST00000374379 TUBB4AP04350 444 aa15.08■□□□□ 0.01
CLIC4-201ENST00000374379 ATP2C1P98194 919 aaPredicted RBP15.08■□□□□ 0.01
CLIC4-201ENST00000374379 GRM4Q14833 912 aa15.08■□□□□ 0.01
CLIC4-201ENST00000374379 HAUS3Q68CZ6 603 aa15.08■□□□□ 0.01
CLIC4-201ENST00000374379 HS2ST1Q7LGA3 356 aa15.08■□□□□ 0.01
CLIC4-201ENST00000374379 FOXP4Q8IVH2 680 aaPredicted RBP15.08■□□□□ 0.01
CLIC4-201ENST00000374379 SLC35F6Q8N357 371 aa15.08■□□□□ 0.01
CLIC4-201ENST00000374379 EHBP1Q8NDI1 1231 aa15.08■□□□□ 0.01
CLIC4-201ENST00000374379 CETN3O15182 167 aa15.08■□□□□ 0
CLIC4-201ENST00000374379 CRKP46108 304 aa15.08■□□□□ 0
CLIC4-201ENST00000374379 MRPL44Q9H9J2 332 aaKnown RBP15.08■□□□□ 0
CLIC4-201ENST00000374379 JCADQ9P266 1359 aa15.08■□□□□ 0
CLIC4-201ENST00000374379 GH2P01242 217 aa15.08■□□□□ 0
CLIC4-201ENST00000374379 MAGEA1P43355 309 aa15.08■□□□□ 0
CLIC4-201ENST00000374379 E4F1Q66K89 784 aaPredicted RBP15.08■□□□□ 0
CLIC4-201ENST00000374379 MYOCDQ8IZQ8 938 aa15.08■□□□□ 0
CLIC4-201ENST00000374379 MYCT1Q8N699 235 aa15.08■□□□□ 0
CLIC4-201ENST00000374379 SMCR8Q8TEV9 937 aaPredicted RBP15.08■□□□□ 0
CLIC4-201ENST00000374379 BARHL2Q9NY43 387 aa15.08■□□□□ 0
CLIC4-201ENST00000374379 EPN1Q9Y6I3 576 aaPredicted RBP15.08■□□□□ 0
CLIC4-201ENST00000374379 CNTNAP4Q9C0A0 1308 aa15.08■□□□□ 0
CLIC4-201ENST00000374379 AOC3Q16853 763 aa15.08■□□□□ 0
CLIC4-201ENST00000374379 FAM26FQ5R3K3 315 aa15.08■□□□□ 0
CLIC4-201ENST00000374379 MTA3Q9BTC8 594 aa15.08■□□□□ 0
CLIC4-201ENST00000374379 OSBPL5Q9H0X9 879 aaPredicted RBP15.08■□□□□ 0
CLIC4-201ENST00000374379 PANK4Q9NVE7 773 aa15.08■□□□□ 0
CLIC4-201ENST00000374379 TUBE1Q9UJT0 475 aa15.08■□□□□ 0
CLIC4-201ENST00000374379 RBM43Q6ZSC3 357 aaKnown RBP15.07■□□□□ 0
CLIC4-201ENST00000374379 NPR1P16066 1061 aa15.07■□□□□ 0
CLIC4-201ENST00000374379 DNM2P50570 870 aa15.07■□□□□ 0
CLIC4-201ENST00000374379 TRIM14Q14142 442 aa15.07■□□□□ 0
CLIC4-201ENST00000374379 KANSL2Q9H9L4 492 aa15.07■□□□□ 0
CLIC4-201ENST00000374379 SEC31AO94979 1220 aaKnown RBP15.07■□□□□ 0
CLIC4-201ENST00000374379 SLURP2P0DP57 97 aa15.07■□□□□ 0
CLIC4-201ENST00000374379 IBSPP21815 317 aaPredicted RBP15.07■□□□□ 0
CLIC4-201ENST00000374379 NCBP1Q09161 790 aaKnown RBP15.07■□□□□ 0
CLIC4-201ENST00000374379 GPATCH4Q5T3I0 446 aaKnown RBP15.07■□□□□ 0
CLIC4-201ENST00000374379 NEDD1Q8NHV4 660 aa15.07■□□□□ 0
CLIC4-201ENST00000374379 P2RX5Q93086 422 aa15.07■□□□□ 0
CLIC4-201ENST00000374379 BICD1Q96G01 975 aa15.07■□□□□ 0
CLIC4-201ENST00000374379 POLLQ9UGP5 575 aa15.07■□□□□ 0
CLIC4-201ENST00000374379 PCDHA6Q9UN73 950 aa15.07■□□□□ 0
CLIC4-201ENST00000374379 PCDHA8Q9Y5H6 950 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms