RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 TUBB2AQ13885 445 aa9.84□□□□□ -0.83
SNRNP40-202ENST00000373720 CFAP100Q494V2 611 aa9.84□□□□□ -0.83
SNRNP40-202ENST00000373720 DACT2Q5SW24 774 aa9.84□□□□□ -0.83
SNRNP40-202ENST00000373720 RRAGBQ5VZM2 374 aa9.84□□□□□ -0.83
SNRNP40-202ENST00000373720 WWC2Q6AWC2 1192 aa9.84□□□□□ -0.83
SNRNP40-202ENST00000373720 CDC42EP5Q6NZY7 148 aa9.84□□□□□ -0.83
SNRNP40-202ENST00000373720 HEATR3Q7Z4Q2 680 aa9.84□□□□□ -0.83
SNRNP40-202ENST00000373720 VSTM4Q8IW00 320 aa9.84□□□□□ -0.83
SNRNP40-202ENST00000373720 CMTR1Q8N1G2 835 aaKnown RBP9.84□□□□□ -0.83
SNRNP40-202ENST00000373720 SPC24Q8NBT2 197 aa9.84□□□□□ -0.83
SNRNP40-202ENST00000373720 MTMR14Q8NCE2 650 aa9.84□□□□□ -0.83
SNRNP40-202ENST00000373720 C7orf43Q8WVR3 580 aa9.84□□□□□ -0.83
SNRNP40-202ENST00000373720 CUL5Q93034 780 aa9.84□□□□□ -0.83
SNRNP40-202ENST00000373720 DYNLL2Q96FJ2 89 aa9.84□□□□□ -0.83
SNRNP40-202ENST00000373720 DHTKD1Q96HY7 919 aaPredicted RBP9.84□□□□□ -0.83
SNRNP40-202ENST00000373720 TUBB2BQ9BVA1 445 aa9.84□□□□□ -0.83
SNRNP40-202ENST00000373720 XPO4Q9C0E2 1151 aaKnown RBP9.84□□□□□ -0.83
SNRNP40-202ENST00000373720 NT5C3AQ9H0P0 336 aa9.84□□□□□ -0.83
SNRNP40-202ENST00000373720 KBTBD4Q9NVX7 518 aa9.84□□□□□ -0.83
SNRNP40-202ENST00000373720 IFNKQ9P0W0 207 aa9.84□□□□□ -0.83
SNRNP40-202ENST00000373720 RABGAP1Q9Y3P9 1069 aa9.84□□□□□ -0.83
SNRNP40-202ENST00000373720 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.84□□□□□ -0.837e-10■□□□□ 9.3
SNRNP40-202ENST00000373720 ANKRD31Q8N7Z5 1873 aa9.84□□□□□ -0.83
SNRNP40-202ENST00000373720 CYTH3O43739 400 aa9.83□□□□□ -0.84
SNRNP40-202ENST00000373720 TBC1D12O60347 775 aa9.83□□□□□ -0.84
SNRNP40-202ENST00000373720 DTNBO60941 627 aa9.83□□□□□ -0.84
SNRNP40-202ENST00000373720 STAT6P42226 847 aa9.83□□□□□ -0.84
SNRNP40-202ENST00000373720 PTPN14Q15678 1187 aa9.83□□□□□ -0.84
SNRNP40-202ENST00000373720 ZNF174Q15697 407 aa9.83□□□□□ -0.84
SNRNP40-202ENST00000373720 ZNF827Q17R98 1081 aa9.83□□□□□ -0.84
SNRNP40-202ENST00000373720 CCDC93Q567U6 631 aa9.83□□□□□ -0.84
SNRNP40-202ENST00000373720 PDXDC2PQ6P474 469 aa9.83□□□□□ -0.84
SNRNP40-202ENST00000373720 SMIM5Q71RC9 77 aa9.83□□□□□ -0.84
SNRNP40-202ENST00000373720 CNGA4Q8IV77 575 aa9.83□□□□□ -0.84
SNRNP40-202ENST00000373720 SLFN12Q8IYM2 578 aa9.83□□□□□ -0.84
SNRNP40-202ENST00000373720 OGFOD1Q8N543 542 aa9.83□□□□□ -0.84
SNRNP40-202ENST00000373720 IGSF22Q8N9C0 903 aa9.83□□□□□ -0.84
SNRNP40-202ENST00000373720 RETREG2Q8NC44 543 aa9.83□□□□□ -0.84
SNRNP40-202ENST00000373720 AGBL3Q8NEM8 1001 aa9.83□□□□□ -0.84
SNRNP40-202ENST00000373720 CACTINQ8WUQ7 758 aaKnown RBP9.83□□□□□ -0.84
SNRNP40-202ENST00000373720 ZNF622Q969S3 477 aaKnown RBP eCLIP9.83□□□□□ -0.84
SNRNP40-202ENST00000373720 PANX2Q96RD6 677 aa9.83□□□□□ -0.84
SNRNP40-202ENST00000373720 SRRTQ9BXP5 876 aaKnown RBP9.83□□□□□ -0.84
SNRNP40-202ENST00000373720 KCNF1Q9H3M0 494 aa9.83□□□□□ -0.84
SNRNP40-202ENST00000373720 NFE2L3Q9Y4A8 694 aa9.83□□□□□ -0.84
SNRNP40-202ENST00000373720 KDM3AQ9Y4C1 1321 aa9.82□□□□□ -0.84
SNRNP40-202ENST00000373720 A0A1B0GTH6 734 aa9.82□□□□□ -0.84
SNRNP40-202ENST00000373720 PSMA7O14818 248 aa9.82□□□□□ -0.84
SNRNP40-202ENST00000373720 RRP9O43818 475 aaKnown RBP9.82□□□□□ -0.84
SNRNP40-202ENST00000373720 ECE2O60344 883 aa9.82□□□□□ -0.84
SNRNP40-202ENST00000373720 RHOBTB3O94955 611 aa9.82□□□□□ -0.84
SNRNP40-202ENST00000373720 MUTP22033 750 aa9.82□□□□□ -0.84
SNRNP40-202ENST00000373720 MCM7P33993 719 aa9.82□□□□□ -0.84
SNRNP40-202ENST00000373720 TGFB2P61812 414 aa9.82□□□□□ -0.84
SNRNP40-202ENST00000373720 SF3B2Q13435 895 aaKnown RBP9.82□□□□□ -0.84
SNRNP40-202ENST00000373720 CUL4BQ13620 913 aa9.82□□□□□ -0.84
SNRNP40-202ENST00000373720 NR1I3Q14994 352 aa9.82□□□□□ -0.84
SNRNP40-202ENST00000373720 TPD52L1Q16890 204 aaPredicted RBP9.82□□□□□ -0.84
SNRNP40-202ENST00000373720 CERKLQ49MI3 558 aaPredicted RBP9.82□□□□□ -0.84
SNRNP40-202ENST00000373720 CDKAL1Q5VV42 579 aa9.82□□□□□ -0.84
SNRNP40-202ENST00000373720 BTNL9Q6UXG8 535 aa9.82□□□□□ -0.84
SNRNP40-202ENST00000373720 FAM83AQ86UY5 434 aa9.82□□□□□ -0.84
SNRNP40-202ENST00000373720 STAG2Q8N3U4 1231 aa9.82□□□□□ -0.84
SNRNP40-202ENST00000373720 EFCAB3Q8N7B9 438 aa9.82□□□□□ -0.84
SNRNP40-202ENST00000373720 KIF18AQ8NI77 898 aa9.82□□□□□ -0.84
SNRNP40-202ENST00000373720 DHX58Q96C10 678 aa9.82□□□□□ -0.84
SNRNP40-202ENST00000373720 C7orf25Q9BPX7 421 aa9.82□□□□□ -0.84
SNRNP40-202ENST00000373720 TMX1Q9H3N1 280 aa9.82□□□□□ -0.84
SNRNP40-202ENST00000373720 FANCLQ9NW38 375 aa9.82□□□□□ -0.84
SNRNP40-202ENST00000373720 SAP30BPQ9UHR5 308 aaKnown RBP9.82□□□□□ -0.84
SNRNP40-202ENST00000373720 CDK5RAP2Q96SN8 1893 aa9.82□□□□□ -0.84
SNRNP40-202ENST00000373720 CYP3A7-CYP3A51PA0A087WV96 503 aa9.81□□□□□ -0.84
SNRNP40-202ENST00000373720 A0A1W2PQC6 194 aa9.81□□□□□ -0.84
SNRNP40-202ENST00000373720 BIN1O00499 593 aa9.81□□□□□ -0.84
SNRNP40-202ENST00000373720 RPN1P04843 607 aaKnown RBP9.81□□□□□ -0.84
SNRNP40-202ENST00000373720 ATP2B1P20020 1258 aa9.81□□□□□ -0.84
SNRNP40-202ENST00000373720 CYP3A7P24462 503 aa9.81□□□□□ -0.84
SNRNP40-202ENST00000373720 LMOD1P29536 600 aaPredicted RBP9.81□□□□□ -0.84
SNRNP40-202ENST00000373720 SHMT1P34896 483 aa9.81□□□□□ -0.84
SNRNP40-202ENST00000373720 BAG6P46379 1132 aa9.81□□□□□ -0.84
SNRNP40-202ENST00000373720 CLK2P49760 499 aaKnown RBP9.81□□□□□ -0.84
SNRNP40-202ENST00000373720 PAK1Q13153 545 aa9.81□□□□□ -0.84
SNRNP40-202ENST00000373720 GRIK5Q16478 980 aa9.81□□□□□ -0.84
SNRNP40-202ENST00000373720 KRT79Q5XKE5 535 aa9.81□□□□□ -0.84
SNRNP40-202ENST00000373720 FILIP1Q7Z7B0 1213 aa9.81□□□□□ -0.84
SNRNP40-202ENST00000373720 PDCL2Q8N4E4 241 aa9.81□□□□□ -0.84
SNRNP40-202ENST00000373720 CERS5Q8N5B7 392 aa9.81□□□□□ -0.84
SNRNP40-202ENST00000373720 TTLL6Q8N841 843 aa9.81□□□□□ -0.84
SNRNP40-202ENST00000373720 GIMAP8Q8ND71 665 aaPredicted RBP9.81□□□□□ -0.84
SNRNP40-202ENST00000373720 RASSF8Q8NHQ8 419 aa9.81□□□□□ -0.84
SNRNP40-202ENST00000373720 HOOK2Q96ED9 719 aa9.81□□□□□ -0.84
SNRNP40-202ENST00000373720 EPSTI1Q96J88 318 aa9.81□□□□□ -0.84
SNRNP40-202ENST00000373720 CAMKK2Q96RR4 588 aa9.81□□□□□ -0.84
SNRNP40-202ENST00000373720 NUP58Q9BVL2 599 aa9.81□□□□□ -0.84
SNRNP40-202ENST00000373720 THAP9Q9H5L6 903 aa9.81□□□□□ -0.84
SNRNP40-202ENST00000373720 EHMT1Q9H9B1 1298 aa9.81□□□□□ -0.84
SNRNP40-202ENST00000373720 MAP3K20Q9NYL2 800 aaKnown RBP9.81□□□□□ -0.84
SNRNP40-202ENST00000373720 LIMA1Q9UHB6 759 aaKnown RBP9.81□□□□□ -0.84
SNRNP40-202ENST00000373720 R3HCC1Q9Y3T6 440 aaKnown RBP9.81□□□□□ -0.84
SNRNP40-202ENST00000373720 SYNRGQ9UMZ2 1314 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms