RNA–Protein interactions for RNA: ENST00000373463.7

TMEM54-202, Transcript of transmembrane protein 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM54, Length 999 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-202ENST00000373463 MYL10Q9BUA6 226 aa24.8■■□□□ 1.56
TMEM54-202ENST00000373463 DDX20Q9UHI6 824 aaKnown RBP24.8■■□□□ 1.56
TMEM54-202ENST00000373463 DDX49Q9Y6V7 483 aaKnown RBP24.8■■□□□ 1.56
TMEM54-202ENST00000373463 ALPK3Q96L96 1907 aa24.79■■□□□ 1.56
TMEM54-202ENST00000373463 CYTH3O43739 400 aa24.79■■□□□ 1.56
TMEM54-202ENST00000373463 ZNF865P0CJ78 1059 aaPredicted RBP24.79■■□□□ 1.56
TMEM54-202ENST00000373463 CNGA1P29973 690 aa24.79■■□□□ 1.56
TMEM54-202ENST00000373463 EXOSC10Q01780 885 aaKnown RBP24.79■■□□□ 1.56
TMEM54-202ENST00000373463 ZNF654Q8IZM8 581 aa24.79■■□□□ 1.56
TMEM54-202ENST00000373463 TCEANC2Q96MN5 208 aa24.79■■□□□ 1.56
TMEM54-202ENST00000373463 NEK1Q96PY6 1258 aa24.79■■□□□ 1.56
TMEM54-202ENST00000373463 VAT1LQ9HCJ6 419 aa24.79■■□□□ 1.56
TMEM54-202ENST00000373463 BAZ2BQ9UIF8 2168 aaKnown RBP24.78■■□□□ 1.56
TMEM54-202ENST00000373463 POTEB2H3BUK9 544 aa24.78■■□□□ 1.56
TMEM54-202ENST00000373463 SEPT4O43236 478 aa24.78■■□□□ 1.56
TMEM54-202ENST00000373463 ANO1Q5XXA6 986 aa24.78■■□□□ 1.56
TMEM54-202ENST00000373463 NSMFQ6X4W1 530 aa24.78■■□□□ 1.56
TMEM54-202ENST00000373463 MSL3Q8N5Y2 521 aaKnown RBP24.78■■□□□ 1.56
TMEM54-202ENST00000373463 PAWRQ96IZ0 340 aaKnown RBP24.78■■□□□ 1.56
TMEM54-202ENST00000373463 PFASO15067 1338 aa24.78■■□□□ 1.56
TMEM54-202ENST00000373463 SYNGAP1Q96PV0 1343 aa24.78■■□□□ 1.56
TMEM54-202ENST00000373463 PPP1R11O60927 126 aaPredicted RBP24.77■■□□□ 1.56
TMEM54-202ENST00000373463 CAPN2P17655 700 aa24.77■■□□□ 1.56
TMEM54-202ENST00000373463 LIFRP42702 1097 aa24.77■■□□□ 1.56
TMEM54-202ENST00000373463 BAATQ14032 418 aaPredicted RBP24.77■■□□□ 1.56
TMEM54-202ENST00000373463 USH1GQ495M9 461 aa24.77■■□□□ 1.56
TMEM54-202ENST00000373463 SLC30A10Q6XR72 485 aa24.77■■□□□ 1.56
TMEM54-202ENST00000373463 ANKLE1Q8NAG6 615 aa24.77■■□□□ 1.56
TMEM54-202ENST00000373463 KATNBL1Q9H079 304 aa24.77■■□□□ 1.56
TMEM54-202ENST00000373463 RIOX1Q9H6W3 641 aa24.77■■□□□ 1.56
TMEM54-202ENST00000373463 NRBP1Q9UHY1 535 aa24.77■■□□□ 1.56
TMEM54-202ENST00000373463 SNX14Q9Y5W7 946 aa24.77■■□□□ 1.56
TMEM54-202ENST00000373463 CATIPQ7Z7H3 387 aa24.76■■□□□ 1.55
TMEM54-202ENST00000373463 CCDC144CPQ8IYA2 1237 aa24.76■■□□□ 1.55
TMEM54-202ENST00000373463 CDKN2AIPQ9NXV6 580 aaPredicted RBP24.76■■□□□ 1.55
TMEM54-202ENST00000373463 DDAH1O94760 285 aa24.75■■□□□ 1.55
TMEM54-202ENST00000373463 REC8O95072 547 aa24.75■■□□□ 1.55
TMEM54-202ENST00000373463 CPA1P15085 419 aa24.75■■□□□ 1.55
TMEM54-202ENST00000373463 ARMCX2Q7L311 632 aa24.75■■□□□ 1.55
TMEM54-202ENST00000373463 NUP133Q8WUM0 1156 aa24.75■■□□□ 1.55
TMEM54-202ENST00000373463 TBC1D5Q92609 795 aa24.75■■□□□ 1.55
TMEM54-202ENST00000373463 MAP3K14Q99558 947 aa24.75■■□□□ 1.55
TMEM54-202ENST00000373463 OPLAHO14841 1288 aa24.74■■□□□ 1.55
TMEM54-202ENST00000373463 DHX16O60231 1041 aaKnown RBP24.74■■□□□ 1.55
TMEM54-202ENST00000373463 MSCO60682 206 aa24.74■■□□□ 1.55
TMEM54-202ENST00000373463 RXRAP19793 462 aa24.74■■□□□ 1.55
TMEM54-202ENST00000373463 DHX32Q7L7V1 743 aaKnown RBP24.74■■□□□ 1.55
TMEM54-202ENST00000373463 SGMS1Q86VZ5 419 aa24.74■■□□□ 1.55
TMEM54-202ENST00000373463 RAB11FIP4Q86YS3 637 aa24.74■■□□□ 1.55
TMEM54-202ENST00000373463 LENG1Q96BZ8 264 aaPredicted RBP24.74■■□□□ 1.55
TMEM54-202ENST00000373463 PNMA2Q9UL42 364 aa24.74■■□□□ 1.55
TMEM54-202ENST00000373463 ADCY6O43306 1168 aa24.73■■□□□ 1.55
TMEM54-202ENST00000373463 COL6A1P12109 1028 aa24.73■■□□□ 1.55
TMEM54-202ENST00000373463 RPS6P62753 249 aaKnown RBP24.73■■□□□ 1.55
TMEM54-202ENST00000373463 KRT32Q14532 448 aa24.73■■□□□ 1.55
TMEM54-202ENST00000373463 FBXO11Q86XK2 927 aa24.73■■□□□ 1.55
TMEM54-202ENST00000373463 TMTC2Q8N394 836 aa24.73■■□□□ 1.55
TMEM54-202ENST00000373463 PIGSQ96S52 555 aa24.73■■□□□ 1.55
TMEM54-202ENST00000373463 USP26Q9BXU7 913 aa24.73■■□□□ 1.55
TMEM54-202ENST00000373463 ABCB11O95342 1321 aa24.72■■□□□ 1.55
TMEM54-202ENST00000373463 CCDC69A6NI79 296 aa24.72■■□□□ 1.55
TMEM54-202ENST00000373463 ZBTB5O15062 677 aa24.72■■□□□ 1.55
TMEM54-202ENST00000373463 PLEKHA8P1O95397 391 aa24.72■■□□□ 1.55
TMEM54-202ENST00000373463 NFXL1Q6ZNB6 911 aa24.72■■□□□ 1.55
TMEM54-202ENST00000373463 RNF207Q6ZRF8 634 aa24.72■■□□□ 1.55
TMEM54-202ENST00000373463 MORC4Q8TE76 937 aa24.72■■□□□ 1.55
TMEM54-202ENST00000373463 BRPF3Q9ULD4 1205 aa24.72■■□□□ 1.55
TMEM54-202ENST00000373463 CNPY2Q9Y2B0 182 aa24.72■■□□□ 1.55
TMEM54-202ENST00000373463 PTPDC1A2A3K4 754 aa24.71■■□□□ 1.55
TMEM54-202ENST00000373463 ACVR2BQ13705 512 aa24.71■■□□□ 1.55
TMEM54-202ENST00000373463 NECAB2Q7Z6G3 386 aa24.71■■□□□ 1.55
TMEM54-202ENST00000373463 JAKMIP1Q96N16 626 aaKnown RBP24.71■■□□□ 1.55
TMEM54-202ENST00000373463 COL20A1Q9P218 1284 aa24.71■■□□□ 1.55
TMEM54-202ENST00000373463 ZHX1Q9UKY1 873 aaPredicted RBP24.71■■□□□ 1.55
TMEM54-202ENST00000373463 EPB41L2O43491 1005 aaKnown RBP24.7■■□□□ 1.54
TMEM54-202ENST00000373463 CALML3P27482 149 aa24.7■■□□□ 1.54
TMEM54-202ENST00000373463 APOA5Q6Q788 366 aa24.7■■□□□ 1.54
TMEM54-202ENST00000373463 HOMER1Q86YM7 354 aa24.7■■□□□ 1.54
TMEM54-202ENST00000373463 SRBD1Q8N5C6 995 aaKnown RBP24.7■■□□□ 1.54
TMEM54-202ENST00000373463 RGS22Q8NE09 1264 aa24.7■■□□□ 1.54
TMEM54-202ENST00000373463 SPZ1Q9BXG8 430 aa24.7■■□□□ 1.54
TMEM54-202ENST00000373463 AMNQ9BXJ7 453 aa24.7■■□□□ 1.54
TMEM54-202ENST00000373463 ABHD16BQ9H3Z7 469 aa24.7■■□□□ 1.54
TMEM54-202ENST00000373463 AKR1A1P14550 325 aa24.69■■□□□ 1.54
TMEM54-202ENST00000373463 ALDH5A1P51649 535 aaPredicted RBP24.69■■□□□ 1.54
TMEM54-202ENST00000373463 GJC2Q5T442 439 aaPredicted RBP24.69■■□□□ 1.54
TMEM54-202ENST00000373463 CMTR1Q8N1G2 835 aaKnown RBP24.69■■□□□ 1.54
TMEM54-202ENST00000373463 CTCFLQ8NI51 663 aaPredicted RBP24.69■■□□□ 1.54
TMEM54-202ENST00000373463 C11orf49Q9H6J7 331 aa24.69■■□□□ 1.54
TMEM54-202ENST00000373463 SLC12A7Q9Y666 1083 aa24.69■■□□□ 1.54
TMEM54-202ENST00000373463 ASB14A6NK59 587 aa24.68■■□□□ 1.54
TMEM54-202ENST00000373463 IRX5P78411 483 aaPredicted RBP24.68■■□□□ 1.54
TMEM54-202ENST00000373463 CCDC144BQ3MJ40 725 aa24.68■■□□□ 1.54
TMEM54-202ENST00000373463 C11orf97A0A1B0GVM6 126 aaPredicted RBP24.67■■□□□ 1.54
TMEM54-202ENST00000373463 DNM1LO00429 736 aa24.67■■□□□ 1.54
TMEM54-202ENST00000373463 PGK1P00558 417 aa24.67■■□□□ 1.54
TMEM54-202ENST00000373463 KIF5BP33176 963 aa24.67■■□□□ 1.54
TMEM54-202ENST00000373463 GHRHRQ02643 423 aa24.67■■□□□ 1.54
TMEM54-202ENST00000373463 LRRC41Q15345 812 aa24.67■■□□□ 1.54
TMEM54-202ENST00000373463 TMEM63BQ5T3F8 832 aa24.67■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms