RNA–Protein interactions for RNA: ENST00000372917.8

TRERF1-203, Transcript of transcriptional regulating factor 1, humanhuman

TSL 1 (best) BASIC

Gene TRERF1, Length 3,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-203ENST00000372917 HIC2Q96JB3 615 aa11.74□□□□□ -0.53
TRERF1-203ENST00000372917 PCDHA7Q9UN72 937 aa11.74□□□□□ -0.53
TRERF1-203ENST00000372917 PNMA6EA0A0J9YXQ4 647 aa11.74□□□□□ -0.53
TRERF1-203ENST00000372917 LBRQ14739 615 aaKnown RBP11.74□□□□□ -0.53
TRERF1-203ENST00000372917 ANKRD1Q15327 319 aa11.74□□□□□ -0.53
TRERF1-203ENST00000372917 C1orf141Q5JVX7 400 aa11.74□□□□□ -0.53
TRERF1-203ENST00000372917 BLOC1S2Q6QNY1 142 aa11.74□□□□□ -0.53
TRERF1-203ENST00000372917 MYOCDQ8IZQ8 938 aa11.74□□□□□ -0.53
TRERF1-203ENST00000372917 CCDC197Q8NCU1 140 aa11.74□□□□□ -0.53
TRERF1-203ENST00000372917 HDAC7Q8WUI4 952 aa11.74□□□□□ -0.53
TRERF1-203ENST00000372917 ZMAT2Q96NC0 199 aaKnown RBP11.74□□□□□ -0.53
TRERF1-203ENST00000372917 HSD3B7Q9H2F3 369 aa11.74□□□□□ -0.53
TRERF1-203ENST00000372917 SH3GLB1Q9Y371 365 aa11.74□□□□□ -0.53
TRERF1-203ENST00000372917 EID1Q9Y6B2 187 aa11.74□□□□□ -0.53
TRERF1-203ENST00000372917 ANKRD26Q9UPS8 1709 aa11.74□□□□□ -0.53
TRERF1-203ENST00000372917 CFAP73A6NFT4 308 aa11.73□□□□□ -0.53
TRERF1-203ENST00000372917 GHRP10912 638 aa11.73□□□□□ -0.53
TRERF1-203ENST00000372917 GNAT2P19087 354 aa11.73□□□□□ -0.53
TRERF1-203ENST00000372917 NFKBIAP25963 317 aa11.73□□□□□ -0.53
TRERF1-203ENST00000372917 PDE6CP51160 858 aa11.73□□□□□ -0.53
TRERF1-203ENST00000372917 OXCT1P55809 520 aa11.73□□□□□ -0.53
TRERF1-203ENST00000372917 PAK2Q13177 524 aa11.73□□□□□ -0.53
TRERF1-203ENST00000372917 PANX2Q96RD6 677 aa11.73□□□□□ -0.53
TRERF1-203ENST00000372917 CCDC8Q9H0W5 538 aaPredicted RBP11.73□□□□□ -0.53
TRERF1-203ENST00000372917 BOLA2Q9H3K6 86 aa11.73□□□□□ -0.53
TRERF1-203ENST00000372917 ZSWIM6Q9HCJ5 1215 aa11.73□□□□□ -0.53
TRERF1-203ENST00000372917 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.73□□□□□ -0.53
TRERF1-203ENST00000372917 FBXO9Q9UK97 447 aaPredicted RBP11.73□□□□□ -0.53
TRERF1-203ENST00000372917 INTUQ9ULD6 942 aa11.73□□□□□ -0.53
TRERF1-203ENST00000372917 SYNPO2Q9UMS6 1093 aa11.73□□□□□ -0.53
TRERF1-203ENST00000372917 ATP7BP35670 1465 aa11.73□□□□□ -0.53
TRERF1-203ENST00000372917 POGZQ7Z3K3 1410 aa11.73□□□□□ -0.53
TRERF1-203ENST00000372917 ZNF185O15231 689 aa11.73□□□□□ -0.53
TRERF1-203ENST00000372917 GLRX3O76003 335 aaKnown RBP11.73□□□□□ -0.53
TRERF1-203ENST00000372917 PENKP01210 267 aaPredicted RBP11.73□□□□□ -0.53
TRERF1-203ENST00000372917 EPHB4P54760 987 aa11.73□□□□□ -0.53
TRERF1-203ENST00000372917 RCN1Q15293 331 aa11.73□□□□□ -0.53
TRERF1-203ENST00000372917 IFI16Q16666 785 aaKnown RBP11.73□□□□□ -0.53
TRERF1-203ENST00000372917 IQCEQ6IPM2 695 aa11.73□□□□□ -0.53
TRERF1-203ENST00000372917 RIC3Q7Z5B4 369 aa11.73□□□□□ -0.53
TRERF1-203ENST00000372917 USP33Q8TEY7 942 aa11.73□□□□□ -0.53
TRERF1-203ENST00000372917 WDR60Q8WVS4 1066 aa11.73□□□□□ -0.53
TRERF1-203ENST00000372917 GGT7Q9UJ14 662 aa11.73□□□□□ -0.53
TRERF1-203ENST00000372917 DAAM1Q9Y4D1 1078 aa11.73□□□□□ -0.53
TRERF1-203ENST00000372917 ATP1A1P05023 1023 aaKnown RBP11.73□□□□□ -0.53
TRERF1-203ENST00000372917 NQO1P15559 274 aaKnown RBP11.73□□□□□ -0.53
TRERF1-203ENST00000372917 GUCY2FP51841 1108 aa11.73□□□□□ -0.53
TRERF1-203ENST00000372917 MCL1Q07820 350 aa11.73□□□□□ -0.53
TRERF1-203ENST00000372917 TBX2Q13207 712 aaPredicted RBP11.73□□□□□ -0.53
TRERF1-203ENST00000372917 THOC7Q6I9Y2 204 aaKnown RBP11.73□□□□□ -0.53
TRERF1-203ENST00000372917 KANK3Q6NY19 840 aa11.73□□□□□ -0.53
TRERF1-203ENST00000372917 SLC15A3Q8IY34 581 aa11.73□□□□□ -0.53
TRERF1-203ENST00000372917 IFT81Q8WYA0 676 aa11.73□□□□□ -0.53
TRERF1-203ENST00000372917 ATP6V1G3Q96LB4 118 aa11.73□□□□□ -0.53
TRERF1-203ENST00000372917 MPHOSPH6Q99547 160 aaKnown RBP11.73□□□□□ -0.53
TRERF1-203ENST00000372917 TRIM10Q9UDY6 481 aa11.73□□□□□ -0.53
TRERF1-203ENST00000372917 DMGDHQ9UI17 866 aaKnown RBP11.73□□□□□ -0.53
TRERF1-203ENST00000372917 KAT6BQ8WYB5 2073 aa11.73□□□□□ -0.53
TRERF1-203ENST00000372917 RAD23BP54727 409 aa11.72□□□□□ -0.53
TRERF1-203ENST00000372917 PTH1RQ03431 593 aa11.72□□□□□ -0.53
TRERF1-203ENST00000372917 EIF4A2Q14240 407 aaKnown RBP11.72□□□□□ -0.53
TRERF1-203ENST00000372917 GRAMD4Q6IC98 578 aa11.72□□□□□ -0.53
TRERF1-203ENST00000372917 PPP4R3AQ6IN85 833 aa11.72□□□□□ -0.53
TRERF1-203ENST00000372917 GMEB1Q9Y692 573 aa11.72□□□□□ -0.53
TRERF1-203ENST00000372917 AKR1B10O60218 316 aa11.72□□□□□ -0.53
TRERF1-203ENST00000372917 CCNFP41002 786 aa11.72□□□□□ -0.53
TRERF1-203ENST00000372917 NLRP5P59047 1200 aa11.72□□□□□ -0.53
TRERF1-203ENST00000372917 AMPD2Q01433 879 aa11.72□□□□□ -0.53
TRERF1-203ENST00000372917 RBL2Q08999 1139 aa11.72□□□□□ -0.53
TRERF1-203ENST00000372917 RHPN1Q8TCX5 695 aa11.72□□□□□ -0.53
TRERF1-203ENST00000372917 KLHL29Q96CT2 875 aa11.72□□□□□ -0.53
TRERF1-203ENST00000372917 SIKE1Q9BRV8 207 aa11.72□□□□□ -0.53
TRERF1-203ENST00000372917 FRMPD1Q5SYB0 1578 aa11.72□□□□□ -0.53
TRERF1-203ENST00000372917 IGF2BP3O00425 579 aaKnown RBP eCLIP11.72□□□□□ -0.53
TRERF1-203ENST00000372917 SEPT2Q15019 361 aa11.72□□□□□ -0.53
TRERF1-203ENST00000372917 DIXDC1Q155Q3 683 aa11.72□□□□□ -0.53
TRERF1-203ENST00000372917 ZNF394Q53GI3 561 aa11.72□□□□□ -0.53
TRERF1-203ENST00000372917 TMEM53Q6P2H8 277 aa11.72□□□□□ -0.53
TRERF1-203ENST00000372917 RUFY4Q6ZNE9 571 aa11.72□□□□□ -0.53
TRERF1-203ENST00000372917 ANKRD24Q8TF21 1146 aa11.72□□□□□ -0.53
TRERF1-203ENST00000372917 LRRC1Q9BTT6 524 aa11.72□□□□□ -0.53
TRERF1-203ENST00000372917 OSBPL10Q9BXB5 764 aa11.72□□□□□ -0.53
TRERF1-203ENST00000372917 PHAXQ9H814 394 aaKnown RBP11.72□□□□□ -0.53
TRERF1-203ENST00000372917 SENP2Q9HC62 589 aa11.72□□□□□ -0.53
TRERF1-203ENST00000372917 ABCF3Q9NUQ8 709 aa11.72□□□□□ -0.53
TRERF1-203ENST00000372917 CD163L1Q9NR16 1453 aa11.71□□□□□ -0.53
TRERF1-203ENST00000372917 TMEM247A6NEH6 219 aa11.71□□□□□ -0.53
TRERF1-203ENST00000372917 CCDC166P0CW27 439 aa11.71□□□□□ -0.53
TRERF1-203ENST00000372917 ETS2P15036 469 aa11.71□□□□□ -0.53
TRERF1-203ENST00000372917 ZNF268Q14587 947 aaPredicted RBP11.71□□□□□ -0.53
TRERF1-203ENST00000372917 PKN1Q16512 942 aa11.71□□□□□ -0.53
TRERF1-203ENST00000372917 GLE1Q53GS7 698 aaKnown RBP11.71□□□□□ -0.53
TRERF1-203ENST00000372917 MIGA2Q7L4E1 593 aa11.71□□□□□ -0.53
TRERF1-203ENST00000372917 SLC17A8Q8NDX2 589 aa11.71□□□□□ -0.53
TRERF1-203ENST00000372917 LINS1Q8NG48 757 aa11.71□□□□□ -0.53
TRERF1-203ENST00000372917 RPGRIP1Q96KN7 1286 aa11.71□□□□□ -0.53
TRERF1-203ENST00000372917 TRAPPC9Q96Q05 1148 aa11.71□□□□□ -0.53
TRERF1-203ENST00000372917 ZNF233A6NK53 670 aa11.71□□□□□ -0.53
TRERF1-203ENST00000372917 YY1P25490 414 aa11.71□□□□□ -0.53
TRERF1-203ENST00000372917 GBP1P32455 592 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms