RNA–Protein interactions for RNA: ENST00000372873.8

SYNPO2L-201, Transcript of synaptopodin 2 like, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2L, Length 4,121 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2L-201ENST00000372873 CCND1P24385 295 aa12.35□□□□□ -0.43
SYNPO2L-201ENST00000372873 SH3BGRP55822 239 aaPredicted RBP12.35□□□□□ -0.43
SYNPO2L-201ENST00000372873 RAPGEF1Q13905 1077 aa12.35□□□□□ -0.43
SYNPO2L-201ENST00000372873 CCDC174Q6PII3 467 aa12.35□□□□□ -0.43
SYNPO2L-201ENST00000372873 KSR1Q8IVT5 923 aa12.35□□□□□ -0.43
SYNPO2L-201ENST00000372873 SYCP3Q8IZU3 236 aa12.35□□□□□ -0.43
SYNPO2L-201ENST00000372873 CTNNBL1Q8WYA6 563 aaPredicted RBP12.35□□□□□ -0.43
SYNPO2L-201ENST00000372873 LARSQ9P2J5 1176 aaKnown RBP12.35□□□□□ -0.43
SYNPO2L-201ENST00000372873 C15orf41Q9Y2V0 281 aa12.35□□□□□ -0.43
SYNPO2L-201ENST00000372873 CCDC194A0A1B0GVG4 234 aa12.35□□□□□ -0.43
SYNPO2L-201ENST00000372873 TTC26A0AVF1 554 aa12.35□□□□□ -0.43
SYNPO2L-201ENST00000372873 PARP1P09874 1014 aaKnown RBP12.35□□□□□ -0.43
SYNPO2L-201ENST00000372873 KLC1Q07866 573 aa12.35□□□□□ -0.43
SYNPO2L-201ENST00000372873 MFSD6Q6ZSS7 791 aa12.35□□□□□ -0.43
SYNPO2L-201ENST00000372873 SUCLG2Q96I99 432 aa12.35□□□□□ -0.43
SYNPO2L-201ENST00000372873 CSRNP2Q9H175 543 aa12.35□□□□□ -0.43
SYNPO2L-201ENST00000372873 NRXN1Q9ULB1 1477 aa12.34□□□□□ -0.43
SYNPO2L-201ENST00000372873 A0A0U1RQJ8 604 aa12.34□□□□□ -0.43
SYNPO2L-201ENST00000372873 A1BGP04217 495 aa12.34□□□□□ -0.43
SYNPO2L-201ENST00000372873 AMPD3Q01432 767 aa12.34□□□□□ -0.43
SYNPO2L-201ENST00000372873 POLA2Q14181 598 aa12.34□□□□□ -0.43
SYNPO2L-201ENST00000372873 TMEM154Q6P9G4 183 aa12.34□□□□□ -0.43
SYNPO2L-201ENST00000372873 ZC3H18Q86VM9 953 aaKnown RBP12.34□□□□□ -0.43
SYNPO2L-201ENST00000372873 RGL1Q9NZL6 768 aa12.34□□□□□ -0.43
SYNPO2L-201ENST00000372873 PPFIA2O75334 1257 aa12.34□□□□□ -0.43
SYNPO2L-201ENST00000372873 FTCDO95954 541 aa12.34□□□□□ -0.43
SYNPO2L-201ENST00000372873 CARSP49589 748 aaKnown RBP12.34□□□□□ -0.43
SYNPO2L-201ENST00000372873 COG7P83436 770 aa12.34□□□□□ -0.43
SYNPO2L-201ENST00000372873 SEPT6Q14141 434 aa12.34□□□□□ -0.43
SYNPO2L-201ENST00000372873 TRAPPC11Q7Z392 1133 aa12.34□□□□□ -0.43
SYNPO2L-201ENST00000372873 GBP7Q8N8V2 638 aaPredicted RBP12.34□□□□□ -0.43
SYNPO2L-201ENST00000372873 CNNM1Q9NRU3 951 aa12.34□□□□□ -0.43
SYNPO2L-201ENST00000372873 SMARCAL1Q9NZC9 954 aa12.34□□□□□ -0.43
SYNPO2L-201ENST00000372873 DLGAP2Q9P1A6 1054 aa12.34□□□□□ -0.43
SYNPO2L-201ENST00000372873 ATP7BP35670 1465 aa12.34□□□□□ -0.43
SYNPO2L-201ENST00000372873 ALKQ9UM73 1620 aa12.34□□□□□ -0.43
SYNPO2L-201ENST00000372873 CCT8L1PA6NM43 557 aa12.34□□□□□ -0.43
SYNPO2L-201ENST00000372873 ACBD5Q5T8D3 534 aaPredicted RBP12.34□□□□□ -0.43
SYNPO2L-201ENST00000372873 NUGGCQ68CJ6 796 aa12.34□□□□□ -0.43
SYNPO2L-201ENST00000372873 IL17REQ8NFR9 667 aa12.34□□□□□ -0.43
SYNPO2L-201ENST00000372873 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.34□□□□□ -0.43
SYNPO2L-201ENST00000372873 SMCR8Q8TEV9 937 aaPredicted RBP12.34□□□□□ -0.43
SYNPO2L-201ENST00000372873 CCDC77Q9BR77 488 aa12.34□□□□□ -0.43
SYNPO2L-201ENST00000372873 ECT2Q9H8V3 914 aa12.34□□□□□ -0.43
SYNPO2L-201ENST00000372873 A2ML1A8K2U0 1454 aa12.34□□□□□ -0.43
SYNPO2L-201ENST00000372873 PSMD14O00487 310 aa12.33□□□□□ -0.44
SYNPO2L-201ENST00000372873 TXNDC9O14530 226 aa12.33□□□□□ -0.44
SYNPO2L-201ENST00000372873 GYPCP04921 128 aa12.33□□□□□ -0.44
SYNPO2L-201ENST00000372873 HNRNPCP07910 306 aaKnown RBP eCLIP12.33□□□□□ -0.44
SYNPO2L-201ENST00000372873 RBM5P52756 815 aaKnown RBP eCLIP12.33□□□□□ -0.44
SYNPO2L-201ENST00000372873 TCERG1LQ5VWI1 586 aa12.33□□□□□ -0.44
SYNPO2L-201ENST00000372873 LMBR1LQ6UX01 489 aa12.33□□□□□ -0.44
SYNPO2L-201ENST00000372873 ARHGAP22Q7Z5H3 698 aa12.33□□□□□ -0.44
SYNPO2L-201ENST00000372873 YTHDF3Q7Z739 585 aaKnown RBP12.33□□□□□ -0.44
SYNPO2L-201ENST00000372873 CROCCP2Q86T23 111 aa12.33□□□□□ -0.44
SYNPO2L-201ENST00000372873 KIF2BQ8N4N8 673 aa12.33□□□□□ -0.44
SYNPO2L-201ENST00000372873 OR2W6PQ8NHA6 318 aa12.33□□□□□ -0.44
SYNPO2L-201ENST00000372873 ALDH8A1Q9H2A2 487 aaPredicted RBP12.33□□□□□ -0.44
SYNPO2L-201ENST00000372873 NEXMIFQ5QGS0 1516 aa12.33□□□□□ -0.44
SYNPO2L-201ENST00000372873 VWDEQ8N2E2 1590 aa12.33□□□□□ -0.44
SYNPO2L-201ENST00000372873 AATKQ6ZMQ8 1374 aa12.33□□□□□ -0.44
SYNPO2L-201ENST00000372873 PNPLA6Q8IY17 1366 aa12.33□□□□□ -0.44
SYNPO2L-201ENST00000372873 OPLAHO14841 1288 aa12.33□□□□□ -0.44
SYNPO2L-201ENST00000372873 SLCO1A2P46721 670 aa12.33□□□□□ -0.44
SYNPO2L-201ENST00000372873 EZH2Q15910 746 aaKnown RBP12.33□□□□□ -0.44
SYNPO2L-201ENST00000372873 ANKRD20A8PQ5CZ79 823 aa12.33□□□□□ -0.44
SYNPO2L-201ENST00000372873 PHLDB3Q6NSJ2 640 aa12.33□□□□□ -0.44
SYNPO2L-201ENST00000372873 SPATA24Q86W54 205 aa12.33□□□□□ -0.44
SYNPO2L-201ENST00000372873 ZNF483Q8TF39 744 aaPredicted RBP12.33□□□□□ -0.44
SYNPO2L-201ENST00000372873 CNKSR2Q8WXI2 1034 aa12.33□□□□□ -0.44
SYNPO2L-201ENST00000372873 ZKSCAN3Q9BRR0 538 aa12.33□□□□□ -0.44
SYNPO2L-201ENST00000372873 TCHPQ9BT92 498 aa12.33□□□□□ -0.44
SYNPO2L-201ENST00000372873 TAF1DQ9H5J8 278 aaPredicted RBP12.33□□□□□ -0.44
SYNPO2L-201ENST00000372873 MLXIPQ9HAP2 919 aa12.33□□□□□ -0.44
SYNPO2L-201ENST00000372873 SNX12Q9UMY4 172 aa12.33□□□□□ -0.44
SYNPO2L-201ENST00000372873 MYOM1P52179 1685 aa12.33□□□□□ -0.44
SYNPO2L-201ENST00000372873 PTPRMP28827 1452 aa12.33□□□□□ -0.44
SYNPO2L-201ENST00000372873 NCK2O43639 380 aa12.33□□□□□ -0.44
SYNPO2L-201ENST00000372873 KRT2P35908 639 aa12.33□□□□□ -0.44
SYNPO2L-201ENST00000372873 MRPS35P82673 323 aaKnown RBP12.33□□□□□ -0.44
SYNPO2L-201ENST00000372873 CHRNA2Q15822 529 aa12.33□□□□□ -0.44
SYNPO2L-201ENST00000372873 MAEAQ7L5Y9 396 aa12.33□□□□□ -0.44
SYNPO2L-201ENST00000372873 TUBGCP2Q9BSJ2 902 aa12.33□□□□□ -0.44
SYNPO2L-201ENST00000372873 ETNK1Q9HBU6 452 aa12.33□□□□□ -0.44
SYNPO2L-201ENST00000372873 STRN4Q9NRL3 753 aa12.33□□□□□ -0.44
SYNPO2L-201ENST00000372873 RNF14Q9UBS8 474 aa12.33□□□□□ -0.44
SYNPO2L-201ENST00000372873 PRPF6O94906 941 aaKnown RBP12.32□□□□□ -0.44
SYNPO2L-201ENST00000372873 CALCOCO2Q13137 446 aa12.32□□□□□ -0.44
SYNPO2L-201ENST00000372873 CFAP157Q5JU67 520 aa12.32□□□□□ -0.44
SYNPO2L-201ENST00000372873 C3orf20Q8ND61 904 aa12.32□□□□□ -0.44
SYNPO2L-201ENST00000372873 ADD3Q9UEY8 706 aaKnown RBP12.32□□□□□ -0.44
SYNPO2L-201ENST00000372873 KIAA1210Q9ULL0 1709 aa12.32□□□□□ -0.44
SYNPO2L-201ENST00000372873 RANBP6O60518 1105 aaKnown RBP12.32□□□□□ -0.44
SYNPO2L-201ENST00000372873 ATP5DP30049 168 aa12.32□□□□□ -0.44
SYNPO2L-201ENST00000372873 PDE6CP51160 858 aa12.32□□□□□ -0.44
SYNPO2L-201ENST00000372873 CABP4P57796 275 aa12.32□□□□□ -0.44
SYNPO2L-201ENST00000372873 ICA1Q05084 483 aa12.32□□□□□ -0.44
SYNPO2L-201ENST00000372873 PDE4DQ08499 809 aa12.32□□□□□ -0.44
SYNPO2L-201ENST00000372873 CCDC84Q86UT8 332 aaPredicted RBP12.32□□□□□ -0.44
SYNPO2L-201ENST00000372873 DTNBP1Q96EV8 351 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms