RNA–Protein interactions for RNA: ENST00000367569.3

SF3B5-201, Transcript of splicing factor 3b subunit 5, humanhuman

APPRIS P1 BASIC

Gene SF3B5, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B5-201ENST00000367569 USH1GQ495M9 461 aa17.13■□□□□ 0.33
SF3B5-201ENST00000367569 ANKS1AQ92625 1134 aa17.13■□□□□ 0.33
SF3B5-201ENST00000367569 RANBP17Q9H2T7 1088 aaKnown RBP17.13■□□□□ 0.33
SF3B5-201ENST00000367569 ATP2A1O14983 1001 aa17.12■□□□□ 0.33
SF3B5-201ENST00000367569 MYCNP04198 464 aaPredicted RBP17.12■□□□□ 0.33
SF3B5-201ENST00000367569 PARP1P09874 1014 aaKnown RBP17.12■□□□□ 0.33
SF3B5-201ENST00000367569 RTP1P59025 263 aa17.12■□□□□ 0.33
SF3B5-201ENST00000367569 BTNL9Q6UXG8 535 aa17.12■□□□□ 0.33
SF3B5-201ENST00000367569 ANKRD35Q8N283 1001 aa17.12■□□□□ 0.33
SF3B5-201ENST00000367569 TRERF1Q96PN7 1200 aa17.12■□□□□ 0.33
SF3B5-201ENST00000367569 TINF2Q9BSI4 451 aa17.12■□□□□ 0.33
SF3B5-201ENST00000367569 ACAD9Q9H845 621 aa17.12■□□□□ 0.33
SF3B5-201ENST00000367569 LY9Q9HBG7 655 aa17.12■□□□□ 0.33
SF3B5-201ENST00000367569 VAT1LQ9HCJ6 419 aa17.12■□□□□ 0.33
SF3B5-201ENST00000367569 COL6A3P12111 3177 aa17.12■□□□□ 0.33
SF3B5-201ENST00000367569 KBTBD13C9JR72 458 aa17.11■□□□□ 0.33
SF3B5-201ENST00000367569 SH2B2O14492 632 aaPredicted RBP17.11■□□□□ 0.33
SF3B5-201ENST00000367569 PLA2G6O60733 806 aa17.11■□□□□ 0.33
SF3B5-201ENST00000367569 COPB2P35606 906 aa17.11■□□□□ 0.33
SF3B5-201ENST00000367569 OAZ1P54368 228 aa17.11■□□□□ 0.33
SF3B5-201ENST00000367569 CNTN2Q02246 1040 aa17.11■□□□□ 0.33
SF3B5-201ENST00000367569 SART3Q15020 963 aaKnown RBP17.11■□□□□ 0.33
SF3B5-201ENST00000367569 CDC37Q16543 378 aaPredicted RBP17.11■□□□□ 0.33
SF3B5-201ENST00000367569 ASPRV1Q53RT3 343 aa17.11■□□□□ 0.33
SF3B5-201ENST00000367569 GPATCH4Q5T3I0 446 aaKnown RBP17.11■□□□□ 0.33
SF3B5-201ENST00000367569 NSMFQ6X4W1 530 aa17.11■□□□□ 0.33
SF3B5-201ENST00000367569 SLC39A5Q6ZMH5 540 aa17.11■□□□□ 0.33
SF3B5-201ENST00000367569 CCDC144CPQ8IYA2 1237 aa17.11■□□□□ 0.33
SF3B5-201ENST00000367569 NUP133Q8WUM0 1156 aa17.11■□□□□ 0.33
SF3B5-201ENST00000367569 PIBF1Q8WXW3 757 aa17.11■□□□□ 0.33
SF3B5-201ENST00000367569 DDX11Q96FC9 970 aa17.11■□□□□ 0.33
SF3B5-201ENST00000367569 PURBQ96QR8 312 aaKnown RBP17.11■□□□□ 0.33
SF3B5-201ENST00000367569 A1CFQ9NQ94 594 aaKnown RBP17.11■□□□□ 0.33
SF3B5-201ENST00000367569 NFIBO00712 420 aa17.1■□□□□ 0.33
SF3B5-201ENST00000367569 ICAM1P05362 532 aa17.1■□□□□ 0.33
SF3B5-201ENST00000367569 MCM5P33992 734 aa17.1■□□□□ 0.33
SF3B5-201ENST00000367569 NT5C2P49902 561 aa17.1■□□□□ 0.33
SF3B5-201ENST00000367569 LRRC41Q15345 812 aa17.1■□□□□ 0.33
SF3B5-201ENST00000367569 SLC35G1Q2M3R5 365 aa17.1■□□□□ 0.33
SF3B5-201ENST00000367569 RNF20Q5VTR2 975 aa17.1■□□□□ 0.33
SF3B5-201ENST00000367569 GPR153Q6NV75 609 aa17.1■□□□□ 0.33
SF3B5-201ENST00000367569 NFXL1Q6ZNB6 911 aa17.1■□□□□ 0.33
SF3B5-201ENST00000367569 Q7L0L9 218 aa17.1■□□□□ 0.33
SF3B5-201ENST00000367569 ADGRF4Q8IZF3 695 aa17.1■□□□□ 0.33
SF3B5-201ENST00000367569 IGDCC4Q8TDY8 1250 aa17.1■□□□□ 0.33
SF3B5-201ENST00000367569 FERMT2Q96AC1 680 aa17.1■□□□□ 0.33
SF3B5-201ENST00000367569 LENG1Q96BZ8 264 aaPredicted RBP17.1■□□□□ 0.33
SF3B5-201ENST00000367569 FGD4Q96M96 766 aa17.1■□□□□ 0.33
SF3B5-201ENST00000367569 MAD2L2Q9UI95 211 aa17.1■□□□□ 0.33
SF3B5-201ENST00000367569 ATP11BQ9Y2G3 1177 aa17.1■□□□□ 0.33
SF3B5-201ENST00000367569 DIS3Q9Y2L1 958 aaKnown RBP17.1■□□□□ 0.33
SF3B5-201ENST00000367569 ADCYAP1R1P41586 468 aa17.09■□□□□ 0.33
SF3B5-201ENST00000367569 GRM4Q14833 912 aa17.09■□□□□ 0.33
SF3B5-201ENST00000367569 SLC30A10Q6XR72 485 aa17.09■□□□□ 0.33
SF3B5-201ENST00000367569 HOMER1Q86YM7 354 aa17.09■□□□□ 0.33
SF3B5-201ENST00000367569 ZNF654Q8IZM8 581 aa17.09■□□□□ 0.33
SF3B5-201ENST00000367569 DEFB123Q8N688 67 aa17.09■□□□□ 0.33
SF3B5-201ENST00000367569 CHST13Q8NET6 341 aa17.09■□□□□ 0.33
SF3B5-201ENST00000367569 LBHD1Q9BQE6 289 aaPredicted RBP17.09■□□□□ 0.33
SF3B5-201ENST00000367569 NRBP1Q9UHY1 535 aa17.09■□□□□ 0.33
SF3B5-201ENST00000367569 ASTN1O14525 1302 aa17.08■□□□□ 0.32
SF3B5-201ENST00000367569 KLRF2D3W0D1 207 aa17.08■□□□□ 0.32
SF3B5-201ENST00000367569 ZNF865P0CJ78 1059 aaPredicted RBP17.08■□□□□ 0.32
SF3B5-201ENST00000367569 FDX1P10109 184 aa17.08■□□□□ 0.32
SF3B5-201ENST00000367569 SNX17Q15036 470 aa17.08■□□□□ 0.32
SF3B5-201ENST00000367569 QRICH1Q2TAL8 776 aa17.08■□□□□ 0.32
SF3B5-201ENST00000367569 TRIM60Q495X7 471 aa17.08■□□□□ 0.32
SF3B5-201ENST00000367569 JAKMIP1Q96N16 626 aaKnown RBP17.08■□□□□ 0.32
SF3B5-201ENST00000367569 NEK1Q96PY6 1258 aa17.08■□□□□ 0.32
SF3B5-201ENST00000367569 JMJD4Q9H9V9 463 aa17.08■□□□□ 0.32
SF3B5-201ENST00000367569 XPNPEP3Q9NQH7 507 aa17.08■□□□□ 0.32
SF3B5-201ENST00000367569 PRKAG2Q9UGJ0 569 aa17.08■□□□□ 0.32
SF3B5-201ENST00000367569 FBXO40Q9UH90 709 aa17.08■□□□□ 0.32
SF3B5-201ENST00000367569 SNX14Q9Y5W7 946 aa17.08■□□□□ 0.32
SF3B5-201ENST00000367569 LTBP2Q14767 1821 aa17.07■□□□□ 0.32
SF3B5-201ENST00000367569 DNAJC25-GNG10A0A024R161 153 aa17.07■□□□□ 0.32
SF3B5-201ENST00000367569 CCDC69A6NI79 296 aa17.07■□□□□ 0.32
SF3B5-201ENST00000367569 REC8O95072 547 aa17.07■□□□□ 0.32
SF3B5-201ENST00000367569 PGK1P00558 417 aa17.07■□□□□ 0.32
SF3B5-201ENST00000367569 RARBP10826 455 aa17.07■□□□□ 0.32
SF3B5-201ENST00000367569 HSPA4P34932 840 aa17.07■□□□□ 0.32
SF3B5-201ENST00000367569 CATIPQ7Z7H3 387 aa17.07■□□□□ 0.32
SF3B5-201ENST00000367569 MICU3Q86XE3 530 aa17.07■□□□□ 0.32
SF3B5-201ENST00000367569 CMTR1Q8N1G2 835 aaKnown RBP17.07■□□□□ 0.32
SF3B5-201ENST00000367569 PHF24Q9UPV7 400 aa17.07■□□□□ 0.32
SF3B5-201ENST00000367569 PTPDC1A2A3K4 754 aa17.06■□□□□ 0.32
SF3B5-201ENST00000367569 POTEB2H3BUK9 544 aa17.06■□□□□ 0.32
SF3B5-201ENST00000367569 PLEKHA8P1O95397 391 aa17.06■□□□□ 0.32
SF3B5-201ENST00000367569 SNAI1O95863 264 aaPredicted RBP17.06■□□□□ 0.32
SF3B5-201ENST00000367569 CALML3P27482 149 aa17.06■□□□□ 0.32
SF3B5-201ENST00000367569 TROAPQ12815 778 aa17.06■□□□□ 0.32
SF3B5-201ENST00000367569 CLEC4DQ8WXI8 215 aa17.06■□□□□ 0.32
SF3B5-201ENST00000367569 PRDM5Q9NQX1 630 aaPredicted RBP17.06■□□□□ 0.32
SF3B5-201ENST00000367569 ZHX1Q9UKY1 873 aaPredicted RBP17.06■□□□□ 0.32
SF3B5-201ENST00000367569 NAP1L2Q9ULW6 460 aaPredicted RBP17.06■□□□□ 0.32
SF3B5-201ENST00000367569 WDR19Q8NEZ3 1342 aa17.05■□□□□ 0.32
SF3B5-201ENST00000367569 LAMA2P24043 3122 aaKnown RBP17.05■□□□□ 0.32
SF3B5-201ENST00000367569 PALM3A6NDB9 673 aaPredicted RBP17.05■□□□□ 0.32
SF3B5-201ENST00000367569 SOWAHBA6NEL2 793 aa17.05■□□□□ 0.32
SF3B5-201ENST00000367569 PPP1R11O60927 126 aaPredicted RBP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms