RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 FAM204AQ9H8W3 233 aa11.87□□□□□ -0.51
SMC3-201ENST00000361804 DISC1Q9NRI5 854 aa11.87□□□□□ -0.51
SMC3-201ENST00000361804 SAP30BPQ9UHR5 308 aaKnown RBP11.87□□□□□ -0.51
SMC3-201ENST00000361804 LUC7L2Q9Y383 392 aaKnown RBP11.87□□□□□ -0.51
SMC3-201ENST00000361804 RBBP6Q7Z6E9 1792 aaKnown RBP11.87□□□□□ -0.51
SMC3-201ENST00000361804 LRRC10BA6NIK2 292 aa11.87□□□□□ -0.51
SMC3-201ENST00000361804 CYTH3O43739 400 aa11.87□□□□□ -0.51
SMC3-201ENST00000361804 DNA2P51530 1060 aa11.87□□□□□ -0.51
SMC3-201ENST00000361804 STK4Q13043 487 aa11.87□□□□□ -0.51
SMC3-201ENST00000361804 GPS2Q13227 327 aa11.87□□□□□ -0.51
SMC3-201ENST00000361804 DIXDC1Q155Q3 683 aa11.87□□□□□ -0.51
SMC3-201ENST00000361804 BLIDQ8IZY5 108 aa11.87□□□□□ -0.51
SMC3-201ENST00000361804 ADSSL1Q8N142 457 aa11.87□□□□□ -0.51
SMC3-201ENST00000361804 EHD4Q9H223 541 aa11.87□□□□□ -0.51
SMC3-201ENST00000361804 VAT1LQ9HCJ6 419 aa11.87□□□□□ -0.51
SMC3-201ENST00000361804 FAM170AA1A519 330 aa11.87□□□□□ -0.51
SMC3-201ENST00000361804 KLRC4O43908 158 aa11.87□□□□□ -0.51
SMC3-201ENST00000361804 ZPR1O75312 459 aa11.87□□□□□ -0.51
SMC3-201ENST00000361804 USP5P45974 858 aa11.87□□□□□ -0.51
SMC3-201ENST00000361804 RC3H1Q5TC82 1133 aaKnown RBP11.87□□□□□ -0.51
SMC3-201ENST00000361804 KIAA1328Q86T90 577 aa11.87□□□□□ -0.51
SMC3-201ENST00000361804 ITIH6Q6UXX5 1313 aa11.86□□□□□ -0.51
SMC3-201ENST00000361804 MYO1CO00159 1063 aa11.86□□□□□ -0.51
SMC3-201ENST00000361804 TRIM21P19474 475 aaKnown RBP11.86□□□□□ -0.51
SMC3-201ENST00000361804 TTC19Q6DKK2 380 aaPredicted RBP11.86□□□□□ -0.51
SMC3-201ENST00000361804 CCDC155Q8N6L0 562 aa11.86□□□□□ -0.51
SMC3-201ENST00000361804 OR8K1Q8NGG5 319 aa11.86□□□□□ -0.51
SMC3-201ENST00000361804 GJA10Q969M2 543 aa11.86□□□□□ -0.51
SMC3-201ENST00000361804 RBM28Q9NW13 759 aaKnown RBP11.86□□□□□ -0.51
SMC3-201ENST00000361804 STX8Q9UNK0 236 aa11.86□□□□□ -0.51
SMC3-201ENST00000361804 SMCHD1A6NHR9 2005 aa11.86□□□□□ -0.51
SMC3-201ENST00000361804 ZNF263O14978 683 aa11.86□□□□□ -0.51
SMC3-201ENST00000361804 RPS6KA4O75676 772 aa11.86□□□□□ -0.51
SMC3-201ENST00000361804 CAVIN4Q5BKX8 364 aa11.86□□□□□ -0.51
SMC3-201ENST00000361804 TRAPPC11Q7Z392 1133 aa11.86□□□□□ -0.51
SMC3-201ENST00000361804 EXOC4Q96A65 974 aa11.86□□□□□ -0.51
SMC3-201ENST00000361804 DUSP9Q99956 384 aaKnown RBP11.86□□□□□ -0.51
SMC3-201ENST00000361804 MLXIPQ9HAP2 919 aa11.86□□□□□ -0.51
SMC3-201ENST00000361804 PSME4Q14997 1843 aa11.86□□□□□ -0.51
SMC3-201ENST00000361804 FECHP22830 423 aa11.86□□□□□ -0.51
SMC3-201ENST00000361804 SLC7A5Q01650 507 aa11.86□□□□□ -0.51
SMC3-201ENST00000361804 ANKRD40Q6AI12 368 aa11.86□□□□□ -0.51
SMC3-201ENST00000361804 EDIL3O43854 480 aa11.85□□□□□ -0.51
SMC3-201ENST00000361804 PLCG1P19174 1290 aa11.85□□□□□ -0.51
SMC3-201ENST00000361804 ACTN2P35609 894 aa11.85□□□□□ -0.51
SMC3-201ENST00000361804 CSGALNACT2Q8N6G5 542 aa11.85□□□□□ -0.51
SMC3-201ENST00000361804 PNMA1Q8ND90 353 aa11.85□□□□□ -0.51
SMC3-201ENST00000361804 GLIS3Q8NEA6 775 aa11.85□□□□□ -0.51
SMC3-201ENST00000361804 ZNF507Q8TCN5 953 aa11.85□□□□□ -0.51
SMC3-201ENST00000361804 BRIP1Q9BX63 1249 aa11.85□□□□□ -0.51
SMC3-201ENST00000361804 JADE2Q9NQC1 790 aa11.85□□□□□ -0.51
SMC3-201ENST00000361804 RSPH14Q9UHP6 348 aa11.85□□□□□ -0.51
SMC3-201ENST00000361804 LGALS16A8MUM7 142 aa11.85□□□□□ -0.51
SMC3-201ENST00000361804 RGL2O15211 777 aa11.85□□□□□ -0.51
SMC3-201ENST00000361804 RNF40O75150 1001 aa11.85□□□□□ -0.51
SMC3-201ENST00000361804 UBA7P41226 1012 aa11.85□□□□□ -0.51
SMC3-201ENST00000361804 TXNRD1Q16881 649 aa11.85□□□□□ -0.51
SMC3-201ENST00000361804 LETM2Q2VYF4 491 aa11.85□□□□□ -0.51
SMC3-201ENST00000361804 HNRNPLLQ8WVV9 542 aaKnown RBP11.85□□□□□ -0.51
SMC3-201ENST00000361804 JAKMIP2Q96AA8 810 aa11.85□□□□□ -0.51
SMC3-201ENST00000361804 TUBGCP2Q9BSJ2 902 aa11.85□□□□□ -0.51
SMC3-201ENST00000361804 KANSL2Q9H9L4 492 aa11.85□□□□□ -0.51
SMC3-201ENST00000361804 PCDHA6Q9UN73 950 aa11.85□□□□□ -0.51
SMC3-201ENST00000361804 PCDHA8Q9Y5H6 950 aa11.85□□□□□ -0.51
SMC3-201ENST00000361804 CCDC194A0A1B0GVG4 234 aa11.85□□□□□ -0.51
SMC3-201ENST00000361804 M0R2N6 131 aa11.85□□□□□ -0.51
SMC3-201ENST00000361804 SEMA3EO15041 775 aa11.85□□□□□ -0.51
SMC3-201ENST00000361804 ERLIN1O75477 346 aa11.85□□□□□ -0.51
SMC3-201ENST00000361804 DDAH1O94760 285 aa11.85□□□□□ -0.51
SMC3-201ENST00000361804 SYF2O95926 243 aaKnown RBP11.85□□□□□ -0.51
SMC3-201ENST00000361804 WHAMMP3Q1A5X7 153 aa11.85□□□□□ -0.51
SMC3-201ENST00000361804 DTHD1Q6ZMT9 781 aa11.85□□□□□ -0.51
SMC3-201ENST00000361804 ANKRD20A12PQ8NF67 263 aa11.85□□□□□ -0.51
SMC3-201ENST00000361804 CAGE1Q8TC20 777 aa11.85□□□□□ -0.51
SMC3-201ENST00000361804 RRP36Q96EU6 259 aaKnown RBP11.85□□□□□ -0.51
SMC3-201ENST00000361804 KAT14Q9H8E8 782 aa11.85□□□□□ -0.51
SMC3-201ENST00000361804 NHEJ1Q9H9Q4 299 aaPredicted RBP11.85□□□□□ -0.51
SMC3-201ENST00000361804 SLC39A2Q9NP94 309 aa11.85□□□□□ -0.51
SMC3-201ENST00000361804 FAM207AQ9NSI2 230 aaPredicted RBP11.85□□□□□ -0.51
SMC3-201ENST00000361804 LRWD1Q9UFC0 647 aa11.85□□□□□ -0.51
SMC3-201ENST00000361804 NCK2O43639 380 aa11.84□□□□□ -0.51
SMC3-201ENST00000361804 APBA1Q02410 837 aa11.84□□□□□ -0.51
SMC3-201ENST00000361804 CRY2Q49AN0 593 aa11.84□□□□□ -0.51
SMC3-201ENST00000361804 TTI2Q6NXR4 508 aa11.84□□□□□ -0.51
SMC3-201ENST00000361804 TMC4Q7Z404 712 aa11.84□□□□□ -0.51
SMC3-201ENST00000361804 CCDC51Q96ER9 411 aa11.84□□□□□ -0.51
SMC3-201ENST00000361804 SAR1BQ9Y6B6 198 aa11.84□□□□□ -0.51
SMC3-201ENST00000361804 CAPN6Q9Y6Q1 641 aa11.84□□□□□ -0.51
SMC3-201ENST00000361804 TECP42680 631 aa11.84□□□□□ -0.51
SMC3-201ENST00000361804 RCAN1P53805 252 aa11.84□□□□□ -0.51
SMC3-201ENST00000361804 TBC1D8BQ0IIM8 1120 aa11.84□□□□□ -0.51
SMC3-201ENST00000361804 DNAJC21Q5F1R6 531 aaKnown RBP11.84□□□□□ -0.51
SMC3-201ENST00000361804 COG1Q8WTW3 980 aa11.84□□□□□ -0.51
SMC3-201ENST00000361804 RRP15Q9Y3B9 282 aaKnown RBP11.84□□□□□ -0.51
SMC3-201ENST00000361804 MYH4Q9Y623 1939 aa11.84□□□□□ -0.51
SMC3-201ENST00000361804 PDS5AQ29RF7 1337 aaKnown RBP11.84□□□□□ -0.51
SMC3-201ENST00000361804 FER1L6Q2WGJ9 1857 aa11.84□□□□□ -0.51
SMC3-201ENST00000361804 DYMQ7RTS9 669 aa11.84□□□□□ -0.51
SMC3-201ENST00000361804 CNOT6LQ96LI5 555 aaKnown RBP11.84□□□□□ -0.51
SMC3-201ENST00000361804 MYH10P35580 1976 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 169.8 ms