RNA–Protein interactions for RNA: ENST00000360212.6

CD46-206, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-206ENST00000360212 IQCKQ8N0W5 287 aa9.55□□□□□ -0.88
CD46-206ENST00000360212 MB21D1Q8N884 522 aa9.55□□□□□ -0.88
CD46-206ENST00000360212 UBLCP1Q8WVY7 318 aaPredicted RBP9.55□□□□□ -0.88
CD46-206ENST00000360212 STRN4Q9NRL3 753 aa9.55□□□□□ -0.88
CD46-206ENST00000360212 PANK4Q9NVE7 773 aa9.55□□□□□ -0.88
CD46-206ENST00000360212 CNOT8Q9UFF9 292 aaKnown RBP9.55□□□□□ -0.88
CD46-206ENST00000360212 CLTCQ00610 1675 aaKnown RBP9.55□□□□□ -0.88
CD46-206ENST00000360212 AKR1B10O60218 316 aa9.55□□□□□ -0.88
CD46-206ENST00000360212 TACC1O75410 805 aa9.55□□□□□ -0.88
CD46-206ENST00000360212 MMP1P03956 469 aa9.55□□□□□ -0.88
CD46-206ENST00000360212 FAM163BP0C2L3 166 aa9.55□□□□□ -0.88
CD46-206ENST00000360212 RAB27AP51159 221 aa9.55□□□□□ -0.88
CD46-206ENST00000360212 RASSF7Q02833 373 aa9.55□□□□□ -0.88
CD46-206ENST00000360212 ITGB3BPQ13352 177 aaPredicted RBP9.55□□□□□ -0.88
CD46-206ENST00000360212 C6orf89Q6UWU4 347 aa9.55□□□□□ -0.88
CD46-206ENST00000360212 ANKRD13DQ6ZTN6 518 aa9.55□□□□□ -0.88
CD46-206ENST00000360212 SPATS2Q86XZ4 545 aaKnown RBP9.55□□□□□ -0.88
CD46-206ENST00000360212 CASKIN2Q8WXE0 1202 aa9.55□□□□□ -0.88
CD46-206ENST00000360212 SPAG5Q96R06 1193 aa9.55□□□□□ -0.88
CD46-206ENST00000360212 GOLPH3Q9H4A6 298 aa9.55□□□□□ -0.88
CD46-206ENST00000360212 GOPCQ9HD26 462 aa9.55□□□□□ -0.88
CD46-206ENST00000360212 SRPRBQ9Y5M8 271 aaKnown RBP9.55□□□□□ -0.88
CD46-206ENST00000360212 EID1Q9Y6B2 187 aa9.55□□□□□ -0.88
CD46-206ENST00000360212 SLC4A4Q9Y6R1 1079 aa9.55□□□□□ -0.88
CD46-206ENST00000360212 SLC8A1P32418 973 aa9.54□□□□□ -0.88
CD46-206ENST00000360212 ARID5AQ03989 594 aa9.54□□□□□ -0.88
CD46-206ENST00000360212 NTRK3Q16288 839 aa9.54□□□□□ -0.88
CD46-206ENST00000360212 SLC5A9Q2M3M2 681 aa9.54□□□□□ -0.88
CD46-206ENST00000360212 KANK3Q6NY19 840 aa9.54□□□□□ -0.88
CD46-206ENST00000360212 DRAXINQ8NBI3 349 aaPredicted RBP9.54□□□□□ -0.88
CD46-206ENST00000360212 UHMK1Q8TAS1 419 aaKnown RBP9.54□□□□□ -0.88
CD46-206ENST00000360212 RAPGEF5Q92565 580 aa9.54□□□□□ -0.88
CD46-206ENST00000360212 CUL5Q93034 780 aa9.54□□□□□ -0.88
CD46-206ENST00000360212 LBHD1Q9BQE6 289 aaPredicted RBP9.54□□□□□ -0.88
CD46-206ENST00000360212 TRIM31Q9BZY9 425 aa9.54□□□□□ -0.88
CD46-206ENST00000360212 DDX21Q9NR30 783 aaKnown RBP eCLIP9.54□□□□□ -0.88
CD46-206ENST00000360212 CHCHD3Q9NX63 227 aaKnown RBP9.54□□□□□ -0.88
CD46-206ENST00000360212 LIMA1Q9UHB6 759 aaKnown RBP9.54□□□□□ -0.88
CD46-206ENST00000360212 TRPC6Q9Y210 931 aa9.54□□□□□ -0.88
CD46-206ENST00000360212 ROBO2Q9HCK4 1378 aa9.54□□□□□ -0.88
CD46-206ENST00000360212 MYH10P35580 1976 aa9.54□□□□□ -0.88
CD46-206ENST00000360212 SH2B2O14492 632 aaPredicted RBP9.54□□□□□ -0.88
CD46-206ENST00000360212 EPB41P11171 864 aaKnown RBP9.54□□□□□ -0.88
CD46-206ENST00000360212 IFNAR2P48551 515 aa9.54□□□□□ -0.88
CD46-206ENST00000360212 MAGOHP61326 146 aaKnown RBP9.54□□□□□ -0.88
CD46-206ENST00000360212 PDIA6Q15084 440 aa9.54□□□□□ -0.88
CD46-206ENST00000360212 YTHDF3Q7Z739 585 aaKnown RBP9.54□□□□□ -0.88
CD46-206ENST00000360212 IRF2BP1Q8IU81 584 aa9.54□□□□□ -0.88
CD46-206ENST00000360212 IFT20Q8IY31 132 aa9.54□□□□□ -0.88
CD46-206ENST00000360212 MMGT1Q8N4V1 131 aa9.54□□□□□ -0.88
CD46-206ENST00000360212 AGAP11Q8TF27 550 aa9.54□□□□□ -0.88
CD46-206ENST00000360212 MAGOHBQ96A72 148 aaKnown RBP9.54□□□□□ -0.88
CD46-206ENST00000360212 ZNF570Q96NI8 536 aa9.54□□□□□ -0.88
CD46-206ENST00000360212 KDM4CQ9H3R0 1056 aa9.54□□□□□ -0.88
CD46-206ENST00000360212 CD2APQ9Y5K6 639 aa9.54□□□□□ -0.88
CD46-206ENST00000360212 BAZ2BQ9UIF8 2168 aaKnown RBP9.54□□□□□ -0.88
CD46-206ENST00000360212 XDHP47989 1333 aa9.54□□□□□ -0.88
CD46-206ENST00000360212 USP6P35125 1406 aa9.54□□□□□ -0.88
CD46-206ENST00000360212 TLDC2A0PJX2 215 aa9.54□□□□□ -0.88
CD46-206ENST00000360212 TRIM75PA6NK02 468 aa9.54□□□□□ -0.88
CD46-206ENST00000360212 GCOM1H8Y6P7 765 aaPredicted RBP9.54□□□□□ -0.88
CD46-206ENST00000360212 PPFIA2O75334 1257 aa9.54□□□□□ -0.88
CD46-206ENST00000360212 MYZAPP0CAP1 466 aa9.54□□□□□ -0.88
CD46-206ENST00000360212 CTNNA1P35221 906 aaKnown RBP9.54□□□□□ -0.88
CD46-206ENST00000360212 RILPL1Q5EBL4 403 aa9.54□□□□□ -0.88
CD46-206ENST00000360212 TRIM22Q8IYM9 498 aa9.54□□□□□ -0.88
CD46-206ENST00000360212 CCDC63Q8NA47 563 aa9.54□□□□□ -0.88
CD46-206ENST00000360212 CCDC97Q96F63 343 aaPredicted RBP9.54□□□□□ -0.88
CD46-206ENST00000360212 MTRQ99707 1265 aa9.54□□□□□ -0.88
CD46-206ENST00000360212 LMCD1Q9NZU5 365 aa9.54□□□□□ -0.88
CD46-206ENST00000360212 ZNF232Q9UNY5 417 aa9.54□□□□□ -0.88
CD46-206ENST00000360212 NUTM2BA6NNL0 878 aaPredicted RBP9.53□□□□□ -0.88
CD46-206ENST00000360212 NUTM2EB1AL46 878 aaPredicted RBP9.53□□□□□ -0.88
CD46-206ENST00000360212 ABCD1P33897 745 aa9.53□□□□□ -0.88
CD46-206ENST00000360212 MCM7P33993 719 aa9.53□□□□□ -0.88
CD46-206ENST00000360212 RANBP1P43487 201 aa9.53□□□□□ -0.88
CD46-206ENST00000360212 KCNJ2P63252 427 aa9.53□□□□□ -0.88
CD46-206ENST00000360212 MAP3K12Q12852 859 aa9.53□□□□□ -0.88
CD46-206ENST00000360212 GKAP1Q5VSY0 366 aaPredicted RBP9.53□□□□□ -0.88
CD46-206ENST00000360212 HHATQ5VTY9 493 aa9.53□□□□□ -0.88
CD46-206ENST00000360212 ATG9AQ7Z3C6 839 aa9.53□□□□□ -0.88
CD46-206ENST00000360212 SPATA20Q8TB22 786 aa9.53□□□□□ -0.88
CD46-206ENST00000360212 MAGEC2Q9UBF1 373 aaPredicted RBP9.53□□□□□ -0.88
CD46-206ENST00000360212 ITIH6Q6UXX5 1313 aa9.53□□□□□ -0.88
CD46-206ENST00000360212 PTPRUQ92729 1446 aa9.53□□□□□ -0.88
CD46-206ENST00000360212 LAMA4Q16363 1823 aa9.53□□□□□ -0.88
CD46-206ENST00000360212 NPM1P06748 294 aaKnown RBP eCLIP9.53□□□□□ -0.88
CD46-206ENST00000360212 FLT3P36888 993 aa9.53□□□□□ -0.88
CD46-206ENST00000360212 EIF4A3P38919 411 aaKnown RBP9.53□□□□□ -0.88
CD46-206ENST00000360212 MTIF2P46199 727 aaKnown RBP9.53□□□□□ -0.88
CD46-206ENST00000360212 GFPT1Q06210 699 aaPredicted RBP9.53□□□□□ -0.88
CD46-206ENST00000360212 BYSLQ13895 437 aaKnown RBP9.53□□□□□ -0.88
CD46-206ENST00000360212 HPS3Q969F9 1004 aa9.53□□□□□ -0.88
CD46-206ENST00000360212 SELENOSQ9BQE4 189 aa9.53□□□□□ -0.88
CD46-206ENST00000360212 CCDC113Q9H0I3 377 aa9.53□□□□□ -0.88
CD46-206ENST00000360212 MMRN2Q9H8L6 949 aa9.53□□□□□ -0.88
CD46-206ENST00000360212 ACTR5Q9H9F9 607 aaPredicted RBP9.53□□□□□ -0.88
CD46-206ENST00000360212 ARHGEF10LQ9HCE6 1279 aa9.53□□□□□ -0.88
CD46-206ENST00000360212 ZSWIM5Q9P217 1185 aa9.53□□□□□ -0.88
CD46-206ENST00000360212 PCDHA13Q9Y5I0 950 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms