RNA–Protein interactions for RNA: ENST00000359366.9

ATXN3-202, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-202ENST00000359366 RBM43Q6ZSC3 357 aaKnown RBP5.79□□□□□ -1.48
ATXN3-202ENST00000359366 METTL16Q86W50 562 aaKnown RBP5.79□□□□□ -1.48
ATXN3-202ENST00000359366 FOXP4Q8IVH2 680 aaPredicted RBP5.79□□□□□ -1.48
ATXN3-202ENST00000359366 HS6ST3Q8IZP7 471 aa5.79□□□□□ -1.48
ATXN3-202ENST00000359366 ACER1Q8TDN7 264 aa5.79□□□□□ -1.48
ATXN3-202ENST00000359366 JDP2Q8WYK2 163 aa5.79□□□□□ -1.48
ATXN3-202ENST00000359366 SYMPKQ92797 1274 aaKnown RBP5.79□□□□□ -1.48
ATXN3-202ENST00000359366 DHX58Q96C10 678 aa5.79□□□□□ -1.48
ATXN3-202ENST00000359366 RRP36Q96EU6 259 aaKnown RBP5.79□□□□□ -1.48
ATXN3-202ENST00000359366 CCDC94Q9BW85 323 aaPredicted RBP5.79□□□□□ -1.48
ATXN3-202ENST00000359366 TMEM60Q9H2L4 133 aa5.79□□□□□ -1.48
ATXN3-202ENST00000359366 JMJD4Q9H9V9 463 aa5.79□□□□□ -1.48
ATXN3-202ENST00000359366 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.79□□□□□ -1.48
ATXN3-202ENST00000359366 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.79□□□□□ -1.48
ATXN3-202ENST00000359366 BARHL2Q9NY43 387 aa5.79□□□□□ -1.48
ATXN3-202ENST00000359366 SEC63Q9UGP8 760 aaKnown RBP5.79□□□□□ -1.48
ATXN3-202ENST00000359366 SWAP70Q9UH65 585 aa5.79□□□□□ -1.48
ATXN3-202ENST00000359366 SERTAD1Q9UHV2 236 aa5.79□□□□□ -1.48
ATXN3-202ENST00000359366 PCDHA4Q9UN74 947 aa5.79□□□□□ -1.48
ATXN3-202ENST00000359366 KIF13BQ9NQT8 1826 aa5.79□□□□□ -1.48
ATXN3-202ENST00000359366 CENPFP49454 3210 aa5.79□□□□□ -1.48
ATXN3-202ENST00000359366 CCDC194A0A1B0GVG4 234 aa5.79□□□□□ -1.48
ATXN3-202ENST00000359366 WNT10BO00744 389 aa5.79□□□□□ -1.48
ATXN3-202ENST00000359366 MAFGO15525 162 aa5.79□□□□□ -1.48
ATXN3-202ENST00000359366 CUTAO60888 179 aa5.79□□□□□ -1.48
ATXN3-202ENST00000359366 COBLO75128 1261 aa5.79□□□□□ -1.48
ATXN3-202ENST00000359366 PTPREP23469 700 aa5.79□□□□□ -1.48
ATXN3-202ENST00000359366 SLC1A4P43007 532 aa5.79□□□□□ -1.48
ATXN3-202ENST00000359366 AFMP43652 599 aa5.79□□□□□ -1.48
ATXN3-202ENST00000359366 GNAQP50148 359 aa5.79□□□□□ -1.48
ATXN3-202ENST00000359366 TGFB2P61812 414 aa5.79□□□□□ -1.48
ATXN3-202ENST00000359366 FKBP1AP62942 108 aaKnown RBP5.79□□□□□ -1.48
ATXN3-202ENST00000359366 HDLBPQ00341 1268 aaKnown RBP5.79□□□□□ -1.48
ATXN3-202ENST00000359366 ZNF543Q08ER8 600 aa5.79□□□□□ -1.48
ATXN3-202ENST00000359366 IKQ13123 557 aaPredicted RBP5.79□□□□□ -1.48
ATXN3-202ENST00000359366 CCDC178Q5BJE1 867 aa5.79□□□□□ -1.48
ATXN3-202ENST00000359366 CIAPIN1Q6FI81 312 aa5.79□□□□□ -1.48
ATXN3-202ENST00000359366 FAM43BQ6ZT52 329 aaPredicted RBP5.79□□□□□ -1.48
ATXN3-202ENST00000359366 JMYQ8N9B5 988 aa5.79□□□□□ -1.48
ATXN3-202ENST00000359366 FAM200AQ8TCP9 573 aa5.79□□□□□ -1.48
ATXN3-202ENST00000359366 PPP1R9BQ96SB3 815 aa5.79□□□□□ -1.48
ATXN3-202ENST00000359366 SPZ1Q9BXG8 430 aa5.79□□□□□ -1.48
ATXN3-202ENST00000359366 KIAA1468Q9P260 1216 aa5.79□□□□□ -1.48
ATXN3-202ENST00000359366 HPSEQ9Y251 543 aa5.79□□□□□ -1.48
ATXN3-202ENST00000359366 ZNF541Q9H0D2 1346 aa5.78□□□□□ -1.48
ATXN3-202ENST00000359366 PSME4Q14997 1843 aa5.78□□□□□ -1.48
ATXN3-202ENST00000359366 DYNC1I1O14576 645 aa5.78□□□□□ -1.48
ATXN3-202ENST00000359366 PYGBP11216 843 aa5.78□□□□□ -1.48
ATXN3-202ENST00000359366 NOVP48745 357 aa5.78□□□□□ -1.48
ATXN3-202ENST00000359366 GMPSP49915 693 aaPredicted RBP5.78□□□□□ -1.48
ATXN3-202ENST00000359366 LETM2Q2VYF4 491 aa5.78□□□□□ -1.48
ATXN3-202ENST00000359366 USH1GQ495M9 461 aa5.78□□□□□ -1.48
ATXN3-202ENST00000359366 SLFN13Q68D06 897 aa5.78□□□□□ -1.48
ATXN3-202ENST00000359366 Q6ZNB5 142 aa5.78□□□□□ -1.48
ATXN3-202ENST00000359366 AOPEPQ8N6M6 819 aa5.78□□□□□ -1.48
ATXN3-202ENST00000359366 CNNM3Q8NE01 707 aa5.78□□□□□ -1.48
ATXN3-202ENST00000359366 EHD4Q9H223 541 aa5.78□□□□□ -1.48
ATXN3-202ENST00000359366 DHX36Q9H2U1 1008 aaKnown RBP5.78□□□□□ -1.48
ATXN3-202ENST00000359366 MYOZ2Q9NPC6 264 aa5.78□□□□□ -1.48
ATXN3-202ENST00000359366 TMOD2Q9NZR1 351 aa5.78□□□□□ -1.48
ATXN3-202ENST00000359366 BRCA1P38398 1863 aaKnown RBP5.78□□□□□ -1.48
ATXN3-202ENST00000359366 FER1L6Q2WGJ9 1857 aa5.78□□□□□ -1.48
ATXN3-202ENST00000359366 PLIN4Q96Q06 1357 aa5.78□□□□□ -1.48
ATXN3-202ENST00000359366 USP17L15C9J2P7 530 aa5.78□□□□□ -1.48
ATXN3-202ENST00000359366 USP17L13C9JLJ4 530 aa5.78□□□□□ -1.48
ATXN3-202ENST00000359366 USP17L11C9JVI0 530 aa5.78□□□□□ -1.48
ATXN3-202ENST00000359366 USP17L18D6R9N7 530 aa5.78□□□□□ -1.48
ATXN3-202ENST00000359366 USP17L22D6RA61 530 aa5.78□□□□□ -1.48
ATXN3-202ENST00000359366 USP17L17D6RBQ6 530 aa5.78□□□□□ -1.48
ATXN3-202ENST00000359366 USP17L19D6RCP7 530 aa5.78□□□□□ -1.48
ATXN3-202ENST00000359366 USP17L20D6RJB6 530 aa5.78□□□□□ -1.48
ATXN3-202ENST00000359366 F5H6K3 240 aa5.78□□□□□ -1.48
ATXN3-202ENST00000359366 M0R2N6 131 aa5.78□□□□□ -1.48
ATXN3-202ENST00000359366 CCNT1O60563 726 aaKnown RBP5.78□□□□□ -1.48
ATXN3-202ENST00000359366 KLRC3Q07444 240 aa5.78□□□□□ -1.48
ATXN3-202ENST00000359366 USP17L24Q0WX57 530 aa5.78□□□□□ -1.48
ATXN3-202ENST00000359366 STX1AQ16623 288 aa5.78□□□□□ -1.48
ATXN3-202ENST00000359366 TATDN1Q6P1N9 297 aa5.78□□□□□ -1.48
ATXN3-202ENST00000359366 USP17L6PQ6QN14 398 aa5.78□□□□□ -1.48
ATXN3-202ENST00000359366 KRBA2Q6ZNG9 492 aa5.78□□□□□ -1.48
ATXN3-202ENST00000359366 EGFL6Q8IUX8 553 aa5.78□□□□□ -1.48
ATXN3-202ENST00000359366 MICALL2Q8IY33 904 aa5.78□□□□□ -1.48
ATXN3-202ENST00000359366 PDLIM2Q96JY6 352 aa5.78□□□□□ -1.48
ATXN3-202ENST00000359366 MRIQ9BWK5 157 aa5.78□□□□□ -1.48
ATXN3-202ENST00000359366 RIOX1Q9H6W3 641 aa5.78□□□□□ -1.48
ATXN3-202ENST00000359366 HDAC9Q9UKV0 1011 aa5.78□□□□□ -1.48
ATXN3-202ENST00000359366 NOL7Q9UMY1 257 aaKnown RBP5.78□□□□□ -1.48
ATXN3-202ENST00000359366 PCDHA5Q9Y5H7 936 aa5.78□□□□□ -1.48
ATXN3-202ENST00000359366 SRPRBQ9Y5M8 271 aaKnown RBP5.78□□□□□ -1.48
ATXN3-202ENST00000359366 GREB1LQ9C091 1923 aaPredicted RBP5.78□□□□□ -1.48
ATXN3-202ENST00000359366 TMEM232C9JQI7 657 aa5.77□□□□□ -1.49
ATXN3-202ENST00000359366 NDUFB10O96000 172 aa5.77□□□□□ -1.49
ATXN3-202ENST00000359366 SNHG28P0DPA3 235 aa5.77□□□□□ -1.49
ATXN3-202ENST00000359366 BMP6P22004 513 aa5.77□□□□□ -1.49
ATXN3-202ENST00000359366 CALML3P27482 149 aa5.77□□□□□ -1.49
ATXN3-202ENST00000359366 TNNI2P48788 182 aa5.77□□□□□ -1.49
ATXN3-202ENST00000359366 LSM11P83369 360 aaKnown RBP eCLIP5.77□□□□□ -1.49
ATXN3-202ENST00000359366 ATP2C1P98194 919 aaPredicted RBP5.77□□□□□ -1.49
ATXN3-202ENST00000359366 RASA3Q14644 834 aa5.77□□□□□ -1.49
ATXN3-202ENST00000359366 IQCB1Q15051 598 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms