RNA–Protein interactions for RNA: ENST00000358028.8

NIPAL3-203, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 1,757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-203ENST00000358028 VWA3AA6NCI4 1184 aa16.18■□□□□ 0.18
NIPAL3-203ENST00000358028 RASSF10A6NK89 507 aa16.18■□□□□ 0.18
NIPAL3-203ENST00000358028 PPP4R3BQ5MIZ7 849 aa16.18■□□□□ 0.18
NIPAL3-203ENST00000358028 CST9Q5W186 159 aa16.18■□□□□ 0.18
NIPAL3-203ENST00000358028 GPKOWQ92917 476 aaPredicted RBP eCLIP16.18■□□□□ 0.18
NIPAL3-203ENST00000358028 CDCA5Q96FF9 252 aa16.18■□□□□ 0.18
NIPAL3-203ENST00000358028 FAM163AQ96GL9 167 aaPredicted RBP16.18■□□□□ 0.18
NIPAL3-203ENST00000358028 PAGE5Q96GU1 130 aa16.18■□□□□ 0.18
NIPAL3-203ENST00000358028 ERO1AQ96HE7 468 aa16.18■□□□□ 0.18
NIPAL3-203ENST00000358028 TMEM47Q9BQJ4 181 aa16.18■□□□□ 0.18
NIPAL3-203ENST00000358028 TMX1Q9H3N1 280 aa16.18■□□□□ 0.18
NIPAL3-203ENST00000358028 TRMT1Q9NXH9 659 aaKnown RBP16.18■□□□□ 0.18
NIPAL3-203ENST00000358028 FLT1P17948 1338 aa16.18■□□□□ 0.18
NIPAL3-203ENST00000358028 BAZ2BQ9UIF8 2168 aaKnown RBP16.18■□□□□ 0.18
NIPAL3-203ENST00000358028 CELF2O95319 508 aaKnown RBP16.18■□□□□ 0.18
NIPAL3-203ENST00000358028 HSPA1AP0DMV8 641 aaKnown RBP16.18■□□□□ 0.18
NIPAL3-203ENST00000358028 HSPA1BP0DMV9 641 aaKnown RBP16.18■□□□□ 0.18
NIPAL3-203ENST00000358028 ERCC5P28715 1186 aaPredicted RBP16.18■□□□□ 0.18
NIPAL3-203ENST00000358028 CDK8P49336 464 aa16.18■□□□□ 0.18
NIPAL3-203ENST00000358028 RHBDL3P58872 404 aa16.18■□□□□ 0.18
NIPAL3-203ENST00000358028 LZTS2Q9BRK4 669 aa16.18■□□□□ 0.18
NIPAL3-203ENST00000358028 PALM3A6NDB9 673 aaPredicted RBP16.17■□□□□ 0.18
NIPAL3-203ENST00000358028 TOP1P11387 765 aaKnown RBP16.17■□□□□ 0.18
NIPAL3-203ENST00000358028 MCM7P33993 719 aa16.17■□□□□ 0.18
NIPAL3-203ENST00000358028 AFMP43652 599 aa16.17■□□□□ 0.18
NIPAL3-203ENST00000358028 VEGFBP49765 207 aa16.17■□□□□ 0.18
NIPAL3-203ENST00000358028 SLC35G1Q2M3R5 365 aa16.17■□□□□ 0.18
NIPAL3-203ENST00000358028 DAGLBQ8NCG7 672 aa16.17■□□□□ 0.18
NIPAL3-203ENST00000358028 CCDC148Q8NFR7 591 aa16.17■□□□□ 0.18
NIPAL3-203ENST00000358028 NEDD1Q8NHV4 660 aa16.17■□□□□ 0.18
NIPAL3-203ENST00000358028 SSC5DA1L4H1 1573 aa16.17■□□□□ 0.18
NIPAL3-203ENST00000358028 PAPPA2Q9BXP8 1791 aa16.17■□□□□ 0.18
NIPAL3-203ENST00000358028 OTOFQ9HC10 1997 aa16.17■□□□□ 0.18
NIPAL3-203ENST00000358028 THSD7BQ9C0I4 1608 aa16.16■□□□□ 0.18
NIPAL3-203ENST00000358028 TCP10L2B9ZVM9 353 aa16.16■□□□□ 0.18
NIPAL3-203ENST00000358028 ZNF18P17022 549 aa16.16■□□□□ 0.18
NIPAL3-203ENST00000358028 DPYDQ12882 1025 aa16.16■□□□□ 0.18
NIPAL3-203ENST00000358028 WWC2Q6AWC2 1192 aa16.16■□□□□ 0.18
NIPAL3-203ENST00000358028 CDC42EP5Q6NZY7 148 aa16.16■□□□□ 0.18
NIPAL3-203ENST00000358028 PYM1Q9BRP8 204 aaKnown RBP16.16■□□□□ 0.18
NIPAL3-203ENST00000358028 DEFB129Q9H1M3 183 aa16.16■□□□□ 0.18
NIPAL3-203ENST00000358028 L2HGDHQ9H9P8 463 aa16.16■□□□□ 0.18
NIPAL3-203ENST00000358028 STX8Q9UNK0 236 aa16.16■□□□□ 0.18
NIPAL3-203ENST00000358028 NFE2L3Q9Y4A8 694 aa16.16■□□□□ 0.18
NIPAL3-203ENST00000358028 TMEM232C9JQI7 657 aa16.15■□□□□ 0.18
NIPAL3-203ENST00000358028 M0R2N6 131 aa16.15■□□□□ 0.18
NIPAL3-203ENST00000358028 SLU7O95391 586 aaKnown RBP16.15■□□□□ 0.18
NIPAL3-203ENST00000358028 IL17AQ16552 155 aa16.15■□□□□ 0.18
NIPAL3-203ENST00000358028 ARL6IP4Q66PJ3 421 aaKnown RBP16.15■□□□□ 0.18
NIPAL3-203ENST00000358028 GALNT17Q6IS24 598 aa16.15■□□□□ 0.18
NIPAL3-203ENST00000358028 TRMT44Q8IYL2 757 aaKnown RBP16.15■□□□□ 0.18
NIPAL3-203ENST00000358028 STXBP3O00186 592 aa16.15■□□□□ 0.18
NIPAL3-203ENST00000358028 CYTH3O43739 400 aa16.15■□□□□ 0.18
NIPAL3-203ENST00000358028 TBX2Q13207 712 aaPredicted RBP16.15■□□□□ 0.18
NIPAL3-203ENST00000358028 RASA3Q14644 834 aa16.15■□□□□ 0.18
NIPAL3-203ENST00000358028 E2F4Q16254 413 aa16.15■□□□□ 0.18
NIPAL3-203ENST00000358028 TYW1BQ6NUM6 668 aa16.15■□□□□ 0.18
NIPAL3-203ENST00000358028 CDAN1Q8IWY9 1227 aa16.15■□□□□ 0.18
NIPAL3-203ENST00000358028 FAM177A1Q8N128 213 aaPredicted RBP16.15■□□□□ 0.18
NIPAL3-203ENST00000358028 C4orf32Q8N8J7 132 aa16.15■□□□□ 0.18
NIPAL3-203ENST00000358028 GSDMAQ96QA5 445 aa16.15■□□□□ 0.18
NIPAL3-203ENST00000358028 PCDHA6Q9UN73 950 aa16.15■□□□□ 0.18
NIPAL3-203ENST00000358028 MTMR7Q9Y216 660 aa16.15■□□□□ 0.18
NIPAL3-203ENST00000358028 PCDHA8Q9Y5H6 950 aa16.15■□□□□ 0.18
NIPAL3-203ENST00000358028 PHLPP2Q6ZVD8 1323 aa16.15■□□□□ 0.18
NIPAL3-203ENST00000358028 CCDC194A0A1B0GVG4 234 aa16.14■□□□□ 0.17
NIPAL3-203ENST00000358028 GOLGA6L9A6NEM1 432 aa16.14■□□□□ 0.17
NIPAL3-203ENST00000358028 ARHGAP6O43182 974 aa16.14■□□□□ 0.17
NIPAL3-203ENST00000358028 ZSCAN12O43309 604 aa16.14■□□□□ 0.17
NIPAL3-203ENST00000358028 LONP1P36776 959 aaKnown RBP16.14■□□□□ 0.17
NIPAL3-203ENST00000358028 NFIAQ12857 509 aa16.14■□□□□ 0.17
NIPAL3-203ENST00000358028 DEFB115Q30KQ5 88 aa16.14■□□□□ 0.17
NIPAL3-203ENST00000358028 HEATR3Q7Z4Q2 680 aa16.14■□□□□ 0.17
NIPAL3-203ENST00000358028 IQUBQ8NA54 791 aa16.14■□□□□ 0.17
NIPAL3-203ENST00000358028 RASGRP4Q8TDF6 673 aa16.14■□□□□ 0.17
NIPAL3-203ENST00000358028 MED15Q96RN5 788 aa16.14■□□□□ 0.17
NIPAL3-203ENST00000358028 SPZ1Q9BXG8 430 aa16.14■□□□□ 0.17
NIPAL3-203ENST00000358028 USP40Q9NVE5 1235 aa16.14■□□□□ 0.17
NIPAL3-203ENST00000358028 INTS13Q9NVM9 706 aa16.14■□□□□ 0.17
NIPAL3-203ENST00000358028 BARHL2Q9NY43 387 aa16.14■□□□□ 0.17
NIPAL3-203ENST00000358028 KLRF2D3W0D1 207 aa16.13■□□□□ 0.17
NIPAL3-203ENST00000358028 CDK11BP21127 795 aaKnown RBP16.13■□□□□ 0.17
NIPAL3-203ENST00000358028 CASP1P29466 404 aa16.13■□□□□ 0.17
NIPAL3-203ENST00000358028 ETF1P62495 437 aaKnown RBP16.13■□□□□ 0.17
NIPAL3-203ENST00000358028 TNFAIP1Q13829 316 aa16.13■□□□□ 0.17
NIPAL3-203ENST00000358028 PDXDC2PQ6P474 469 aa16.13■□□□□ 0.17
NIPAL3-203ENST00000358028 TMEM39BQ9GZU3 492 aa16.13■□□□□ 0.17
NIPAL3-203ENST00000358028 TMOD2Q9NZR1 351 aa16.13■□□□□ 0.17
NIPAL3-203ENST00000358028 ZNF215Q9UL58 517 aaPredicted RBP16.13■□□□□ 0.17
NIPAL3-203ENST00000358028 ABT1Q9ULW3 272 aaKnown RBP16.13■□□□□ 0.17
NIPAL3-203ENST00000358028 PARP1P09874 1014 aaKnown RBP16.13■□□□□ 0.17
NIPAL3-203ENST00000358028 GOLGA8HP0CJ92 632 aa16.13■□□□□ 0.17
NIPAL3-203ENST00000358028 CUL4BQ13620 913 aa16.13■□□□□ 0.17
NIPAL3-203ENST00000358028 HSP90AA4PQ58FG1 418 aa16.13■□□□□ 0.17
NIPAL3-203ENST00000358028 COL13A1Q5TAT6 717 aaPredicted RBP16.13■□□□□ 0.17
NIPAL3-203ENST00000358028 SPECC1LQ69YQ0 1117 aa16.13■□□□□ 0.17
NIPAL3-203ENST00000358028 ZNF397Q8NF99 534 aaPredicted RBP16.13■□□□□ 0.17
NIPAL3-203ENST00000358028 PPP2R3BQ9Y5P8 575 aa16.13■□□□□ 0.17
NIPAL3-203ENST00000358028 TLL2Q9Y6L7 1015 aa16.13■□□□□ 0.17
NIPAL3-203ENST00000358028 SYNRGQ9UMZ2 1314 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms