RNA–Protein interactions for RNA: ENST00000349379.5

SNX3-202, Transcript of sorting nexin 3, humanhuman

TSL 2 BASIC

Gene SNX3, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-202ENST00000349379 CLEC4DQ8WXI8 215 aa25.75■■□□□ 1.71
SNX3-202ENST00000349379 USP26Q9BXU7 913 aa25.75■■□□□ 1.71
SNX3-202ENST00000349379 LRRC2Q9BYS8 371 aa25.75■■□□□ 1.71
SNX3-202ENST00000349379 RIOX1Q9H6W3 641 aa25.75■■□□□ 1.71
SNX3-202ENST00000349379 NRBP1Q9UHY1 535 aa25.75■■□□□ 1.71
SNX3-202ENST00000349379 PDE4DIPQ5VU43 2346 aa25.75■■□□□ 1.71
SNX3-202ENST00000349379 MKI67P46013 3256 aaKnown RBP25.75■■□□□ 1.71
SNX3-202ENST00000349379 SYNGAP1Q96PV0 1343 aa25.74■■□□□ 1.71
SNX3-202ENST00000349379 QRICH1Q2TAL8 776 aa25.74■■□□□ 1.71
SNX3-202ENST00000349379 LHX8Q68G74 356 aa25.74■■□□□ 1.71
SNX3-202ENST00000349379 CYP39A1Q9NYL5 469 aa25.74■■□□□ 1.71
SNX3-202ENST00000349379 OGDHLQ9ULD0 1010 aa25.74■■□□□ 1.71
SNX3-202ENST00000349379 TNRC18O15417 2968 aaPredicted RBP25.73■■□□□ 1.71
SNX3-202ENST00000349379 NFIBO00712 420 aa25.73■■□□□ 1.71
SNX3-202ENST00000349379 CYTH3O43739 400 aa25.73■■□□□ 1.71
SNX3-202ENST00000349379 HMGB1P09429 215 aaKnown RBP25.73■■□□□ 1.71
SNX3-202ENST00000349379 CCDC69A6NI79 296 aa25.72■■□□□ 1.71
SNX3-202ENST00000349379 POTEB2H3BUK9 544 aa25.72■■□□□ 1.71
SNX3-202ENST00000349379 CNTN2Q02246 1040 aa25.72■■□□□ 1.71
SNX3-202ENST00000349379 MYL10Q9BUA6 226 aa25.72■■□□□ 1.71
SNX3-202ENST00000349379 ALPK3Q96L96 1907 aa25.72■■□□□ 1.71
SNX3-202ENST00000349379 ASTN1O14525 1302 aa25.71■■□□□ 1.71
SNX3-202ENST00000349379 SOWAHBA6NEL2 793 aa25.71■■□□□ 1.71
SNX3-202ENST00000349379 PRAMEF19Q5SWL8 479 aa25.71■■□□□ 1.71
SNX3-202ENST00000349379 NFXL1Q6ZNB6 911 aa25.71■■□□□ 1.71
SNX3-202ENST00000349379 NUP133Q8WUM0 1156 aa25.71■■□□□ 1.71
SNX3-202ENST00000349379 TCEANC2Q96MN5 208 aa25.71■■□□□ 1.71
SNX3-202ENST00000349379 MAF1Q9H063 256 aa25.71■■□□□ 1.71
SNX3-202ENST00000349379 VAT1LQ9HCJ6 419 aa25.71■■□□□ 1.71
SNX3-202ENST00000349379 DDX20Q9UHI6 824 aaKnown RBP25.71■■□□□ 1.71
SNX3-202ENST00000349379 ABCB11O95342 1321 aa25.7■■□□□ 1.71
SNX3-202ENST00000349379 SEPT4O43236 478 aa25.7■■□□□ 1.7
SNX3-202ENST00000349379 DHX16O60231 1041 aaKnown RBP25.7■■□□□ 1.7
SNX3-202ENST00000349379 MSCO60682 206 aa25.7■■□□□ 1.7
SNX3-202ENST00000349379 SNAI1O95863 264 aaPredicted RBP25.7■■□□□ 1.7
SNX3-202ENST00000349379 TFRCP02786 760 aaKnown RBP25.7■■□□□ 1.7
SNX3-202ENST00000349379 SMARCA1P28370 1054 aa25.7■■□□□ 1.7
SNX3-202ENST00000349379 NSMFQ6X4W1 530 aa25.7■■□□□ 1.7
SNX3-202ENST00000349379 ANKLE1Q8NAG6 615 aa25.7■■□□□ 1.7
SNX3-202ENST00000349379 CTCFLQ8NI51 663 aaPredicted RBP25.7■■□□□ 1.7
SNX3-202ENST00000349379 JAKMIP1Q96N16 626 aaKnown RBP25.7■■□□□ 1.7
SNX3-202ENST00000349379 ZBTB5O15062 677 aa25.69■■□□□ 1.7
SNX3-202ENST00000349379 ZNF865P0CJ78 1059 aaPredicted RBP25.69■■□□□ 1.7
SNX3-202ENST00000349379 CALM1P0DP23 149 aa25.69■■□□□ 1.7
SNX3-202ENST00000349379 CALM2P0DP24 149 aa25.69■■□□□ 1.7
SNX3-202ENST00000349379 CALM3P0DP25 149 aa25.69■■□□□ 1.7
SNX3-202ENST00000349379 KIF5BP33176 963 aa25.69■■□□□ 1.7
SNX3-202ENST00000349379 MNX1P50219 401 aaPredicted RBP25.69■■□□□ 1.7
SNX3-202ENST00000349379 BAATQ14032 418 aaPredicted RBP25.69■■□□□ 1.7
SNX3-202ENST00000349379 USH1GQ495M9 461 aa25.69■■□□□ 1.7
SNX3-202ENST00000349379 FBXO11Q86XK2 927 aa25.69■■□□□ 1.7
SNX3-202ENST00000349379 RGS22Q8NE09 1264 aa25.69■■□□□ 1.7
SNX3-202ENST00000349379 SPZ1Q9BXG8 430 aa25.69■■□□□ 1.7
SNX3-202ENST00000349379 SLC12A7Q9Y666 1083 aa25.69■■□□□ 1.7
SNX3-202ENST00000349379 PPP1R11O60927 126 aaPredicted RBP25.68■■□□□ 1.7
SNX3-202ENST00000349379 FARP2O94887 1054 aaPredicted RBP25.68■■□□□ 1.7
SNX3-202ENST00000349379 APOA5Q6Q788 366 aa25.68■■□□□ 1.7
SNX3-202ENST00000349379 FBXL16Q8N461 479 aa25.68■■□□□ 1.7
SNX3-202ENST00000349379 AMNQ9BXJ7 453 aa25.68■■□□□ 1.7
SNX3-202ENST00000349379 CPA1P15085 419 aa25.67■■□□□ 1.7
SNX3-202ENST00000349379 RXRAP19793 462 aa25.67■■□□□ 1.7
SNX3-202ENST00000349379 CNGA1P29973 690 aa25.67■■□□□ 1.7
SNX3-202ENST00000349379 RPS6P62753 249 aaKnown RBP25.67■■□□□ 1.7
SNX3-202ENST00000349379 BLOC1S2Q6QNY1 142 aa25.67■■□□□ 1.7
SNX3-202ENST00000349379 SLC30A10Q6XR72 485 aa25.67■■□□□ 1.7
SNX3-202ENST00000349379 RNF207Q6ZRF8 634 aa25.67■■□□□ 1.7
SNX3-202ENST00000349379 ARMCX2Q7L311 632 aa25.67■■□□□ 1.7
SNX3-202ENST00000349379 PIGSQ96S52 555 aa25.67■■□□□ 1.7
SNX3-202ENST00000349379 LZTS2Q9BRK4 669 aa25.67■■□□□ 1.7
SNX3-202ENST00000349379 AGXT2Q9BYV1 514 aa25.67■■□□□ 1.7
SNX3-202ENST00000349379 KATNBL1Q9H079 304 aa25.67■■□□□ 1.7
SNX3-202ENST00000349379 CDKN2AIPQ9NXV6 580 aaPredicted RBP25.67■■□□□ 1.7
SNX3-202ENST00000349379 BRPF3Q9ULD4 1205 aa25.67■■□□□ 1.7
SNX3-202ENST00000349379 LOC102724159A0A0B4J2E5 919 aa25.66■■□□□ 1.7
SNX3-202ENST00000349379 RPS6KB1P23443 525 aa25.66■■□□□ 1.7
SNX3-202ENST00000349379 PSMA5P28066 241 aa25.66■■□□□ 1.7
SNX3-202ENST00000349379 GNAQP50148 359 aa25.66■■□□□ 1.7
SNX3-202ENST00000349379 GHRHRQ02643 423 aa25.66■■□□□ 1.7
SNX3-202ENST00000349379 PWP2Q15269 919 aaKnown RBP25.66■■□□□ 1.7
SNX3-202ENST00000349379 CCDC144CPQ8IYA2 1237 aa25.66■■□□□ 1.7
SNX3-202ENST00000349379 MORC4Q8TE76 937 aa25.66■■□□□ 1.7
SNX3-202ENST00000349379 PURBQ96QR8 312 aaKnown RBP25.66■■□□□ 1.7
SNX3-202ENST00000349379 CNPY2Q9Y2B0 182 aa25.66■■□□□ 1.7
SNX3-202ENST00000349379 MRPL11Q9Y3B7 192 aaKnown RBP25.66■■□□□ 1.7
SNX3-202ENST00000349379 PTPDC1A2A3K4 754 aa25.65■■□□□ 1.7
SNX3-202ENST00000349379 ASB14A6NK59 587 aa25.65■■□□□ 1.7
SNX3-202ENST00000349379 PLEKHA8P1O95397 391 aa25.65■■□□□ 1.7
SNX3-202ENST00000349379 FANCBQ8NB91 859 aa25.65■■□□□ 1.7
SNX3-202ENST00000349379 ABHD16BQ9H3Z7 469 aa25.65■■□□□ 1.7
SNX3-202ENST00000349379 KIAA1217Q5T5P2 1943 aa25.65■■□□□ 1.7
SNX3-202ENST00000349379 PNMA6FA0A0J9YX94 578 aa25.64■■□□□ 1.7
SNX3-202ENST00000349379 OPLAHO14841 1288 aa25.64■■□□□ 1.7
SNX3-202ENST00000349379 RCAN1P53805 252 aa25.64■■□□□ 1.7
SNX3-202ENST00000349379 MICU3Q86XE3 530 aa25.64■■□□□ 1.7
SNX3-202ENST00000349379 HOMER1Q86YM7 354 aa25.64■■□□□ 1.7
SNX3-202ENST00000349379 RAB11FIP4Q86YS3 637 aa25.64■■□□□ 1.7
SNX3-202ENST00000349379 SRBD1Q8N5C6 995 aaKnown RBP25.64■■□□□ 1.7
SNX3-202ENST00000349379 TM6SF1Q9BZW5 370 aa25.64■■□□□ 1.7
SNX3-202ENST00000349379 ZSWIM6Q9HCJ5 1215 aa25.64■■□□□ 1.7
SNX3-202ENST00000349379 ADD3Q9UEY8 706 aaKnown RBP25.64■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms