RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 CKAP4Q07065 602 aaKnown RBP12.02□□□□□ -0.49
CLCN6-202ENST00000346436 FAM160B2Q86V87 743 aa12.02□□□□□ -0.49
CLCN6-202ENST00000346436 NEK11Q8NG66 645 aa12.02□□□□□ -0.49
CLCN6-202ENST00000346436 IFT81Q8WYA0 676 aa12.02□□□□□ -0.49
CLCN6-202ENST00000346436 NOC4LQ9BVI4 516 aaKnown RBP12.02□□□□□ -0.49
CLCN6-202ENST00000346436 IQCGQ9H095 443 aaKnown RBP12.02□□□□□ -0.49
CLCN6-202ENST00000346436 KANSL2Q9H9L4 492 aa12.02□□□□□ -0.49
CLCN6-202ENST00000346436 ADGRL3Q9HAR2 1447 aa12.02□□□□□ -0.49
CLCN6-202ENST00000346436 CCNT1O60563 726 aaKnown RBP12.01□□□□□ -0.49
CLCN6-202ENST00000346436 ASNSP08243 561 aa12.01□□□□□ -0.49
CLCN6-202ENST00000346436 KRT83P78385 493 aa12.01□□□□□ -0.49
CLCN6-202ENST00000346436 PLCB3Q01970 1234 aa12.01□□□□□ -0.49
CLCN6-202ENST00000346436 SND1Q7KZF4 910 aaKnown RBP eCLIP12.01□□□□□ -0.49
CLCN6-202ENST00000346436 REXO1Q8N1G1 1221 aaKnown RBP12.01□□□□□ -0.49
CLCN6-202ENST00000346436 TEKT3Q9BXF9 490 aa12.01□□□□□ -0.49
CLCN6-202ENST00000346436 PIH1D3Q9NQM4 214 aaKnown RBP12.01□□□□□ -0.49
CLCN6-202ENST00000346436 ATP8B3O60423 1300 aa12.01□□□□□ -0.49
CLCN6-202ENST00000346436 ATP2C2O75185 946 aa12.01□□□□□ -0.49
CLCN6-202ENST00000346436 TACC1O75410 805 aa12.01□□□□□ -0.49
CLCN6-202ENST00000346436 PTPREP23469 700 aa12.01□□□□□ -0.49
CLCN6-202ENST00000346436 KCNJ6P48051 423 aa12.01□□□□□ -0.49
CLCN6-202ENST00000346436 GPATCH4Q5T3I0 446 aaKnown RBP12.01□□□□□ -0.49
CLCN6-202ENST00000346436 HDXQ7Z353 690 aa12.01□□□□□ -0.49
CLCN6-202ENST00000346436 IPO4Q8TEX9 1081 aaKnown RBP12.01□□□□□ -0.49
CLCN6-202ENST00000346436 GPKOWQ92917 476 aaPredicted RBP eCLIP12.01□□□□□ -0.49
CLCN6-202ENST00000346436 ATP6V0A1Q93050 837 aa12.01□□□□□ -0.49
CLCN6-202ENST00000346436 SELENOOQ9BVL4 669 aa12.01□□□□□ -0.49
CLCN6-202ENST00000346436 DIP2CQ9Y2E4 1556 aa12.01□□□□□ -0.49
CLCN6-202ENST00000346436 ABL1P00519 1130 aa12.01□□□□□ -0.49
CLCN6-202ENST00000346436 ATP2A2P16615 1042 aaKnown RBP12.01□□□□□ -0.49
CLCN6-202ENST00000346436 POLR2BP30876 1174 aaKnown RBP12.01□□□□□ -0.49
CLCN6-202ENST00000346436 ZNF157P51786 506 aaPredicted RBP12.01□□□□□ -0.49
CLCN6-202ENST00000346436 GABPB1Q06547 395 aaPredicted RBP12.01□□□□□ -0.49
CLCN6-202ENST00000346436 PODNQ7Z5L7 613 aa12.01□□□□□ -0.49
CLCN6-202ENST00000346436 FOXP4Q8IVH2 680 aaPredicted RBP12.01□□□□□ -0.49
CLCN6-202ENST00000346436 CSGALNACT2Q8N6G5 542 aa12.01□□□□□ -0.49
CLCN6-202ENST00000346436 NT5C3AQ9H0P0 336 aa12.01□□□□□ -0.49
CLCN6-202ENST00000346436 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.01□□□□□ -0.49
CLCN6-202ENST00000346436 TMEM232C9JQI7 657 aa12.01□□□□□ -0.49
CLCN6-202ENST00000346436 PDE8BO95263 885 aa12.01□□□□□ -0.49
CLCN6-202ENST00000346436 TXKP42681 527 aa12.01□□□□□ -0.49
CLCN6-202ENST00000346436 CYP26C1Q6V0L0 522 aa12.01□□□□□ -0.49
CLCN6-202ENST00000346436 PLA2G4DQ86XP0 818 aa12.01□□□□□ -0.49
CLCN6-202ENST00000346436 SYMPKQ92797 1274 aaKnown RBP12.01□□□□□ -0.49
CLCN6-202ENST00000346436 SAMSN1Q9NSI8 373 aaKnown RBP12.01□□□□□ -0.49
CLCN6-202ENST00000346436 BSDC1Q9NW68 430 aaPredicted RBP12.01□□□□□ -0.49
CLCN6-202ENST00000346436 PI4KBQ9UBF8 816 aa12.01□□□□□ -0.49
CLCN6-202ENST00000346436 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.01□□□□□ -0.49
CLCN6-202ENST00000346436 CDC42BPGQ6DT37 1551 aa12.01□□□□□ -0.49
CLCN6-202ENST00000346436 TNPO2O14787 897 aaKnown RBP12□□□□□ -0.49
CLCN6-202ENST00000346436 ZNF449Q6P9G9 518 aa12□□□□□ -0.49
CLCN6-202ENST00000346436 DYMQ7RTS9 669 aa12□□□□□ -0.49
CLCN6-202ENST00000346436 GNL3Q9BVP2 549 aaKnown RBP eCLIP12□□□□□ -0.49
CLCN6-202ENST00000346436 HOXC10Q9NYD6 342 aa12□□□□□ -0.49
CLCN6-202ENST00000346436 CDC25AP30304 524 aa12□□□□□ -0.49
CLCN6-202ENST00000346436 ABCD1P33897 745 aa12□□□□□ -0.49
CLCN6-202ENST00000346436 RC3H1Q5TC82 1133 aaKnown RBP12□□□□□ -0.49
CLCN6-202ENST00000346436 SLC17A8Q8NDX2 589 aa12□□□□□ -0.49
CLCN6-202ENST00000346436 KDM3AQ9Y4C1 1321 aa12□□□□□ -0.49
CLCN6-202ENST00000346436 CYP2D7A0A087X1C5 515 aa12□□□□□ -0.49
CLCN6-202ENST00000346436 SRGAP2BP0DMP2 458 aa12□□□□□ -0.49
CLCN6-202ENST00000346436 TBC1D10BQ4KMP7 808 aaPredicted RBP12□□□□□ -0.49
CLCN6-202ENST00000346436 FBXO38Q6PIJ6 1188 aa12□□□□□ -0.49
CLCN6-202ENST00000346436 CCDC77Q9BR77 488 aa12□□□□□ -0.49
CLCN6-202ENST00000346436 USP31Q70CQ4 1352 aa12□□□□□ -0.49
CLCN6-202ENST00000346436 PLEKHG2Q9H7P9 1386 aa12□□□□□ -0.49
CLCN6-202ENST00000346436 HSF2BPO75031 334 aa12□□□□□ -0.49
CLCN6-202ENST00000346436 CASP1P29466 404 aa12□□□□□ -0.49
CLCN6-202ENST00000346436 GJC1P36383 396 aa12□□□□□ -0.49
CLCN6-202ENST00000346436 DMTNQ08495 405 aa12□□□□□ -0.49
CLCN6-202ENST00000346436 RAD51AP2Q09MP3 1159 aa12□□□□□ -0.49
CLCN6-202ENST00000346436 CCDC50Q8IVM0 306 aa12□□□□□ -0.49
CLCN6-202ENST00000346436 GTF3C2Q8WUA4 911 aaPredicted RBP12□□□□□ -0.49
CLCN6-202ENST00000346436 CACYBPQ9HB71 228 aaKnown RBP12□□□□□ -0.49
CLCN6-202ENST00000346436 SPTLC3Q9NUV7 552 aa12□□□□□ -0.49
CLCN6-202ENST00000346436 ZSWIM5Q9P217 1185 aa12□□□□□ -0.49
CLCN6-202ENST00000346436 MED23Q9ULK4 1368 aa12□□□□□ -0.49
CLCN6-202ENST00000346436 ADD2P35612 726 aa12□□□□□ -0.49
CLCN6-202ENST00000346436 MCAMP43121 646 aa12□□□□□ -0.49
CLCN6-202ENST00000346436 CNNM4Q6P4Q7 775 aa12□□□□□ -0.49
CLCN6-202ENST00000346436 SUGCTQ9HAC7 445 aa12□□□□□ -0.49
CLCN6-202ENST00000346436 PCDHA1Q9Y5I3 950 aa12□□□□□ -0.49
CLCN6-202ENST00000346436 DPYSL4O14531 572 aa11.99□□□□□ -0.49
CLCN6-202ENST00000346436 NFKBIAP25963 317 aa11.99□□□□□ -0.49
CLCN6-202ENST00000346436 ARID4AP29374 1257 aaPredicted RBP11.99□□□□□ -0.49
CLCN6-202ENST00000346436 CCND2P30279 289 aa11.99□□□□□ -0.49
CLCN6-202ENST00000346436 IGBP1P78318 339 aa11.99□□□□□ -0.49
CLCN6-202ENST00000346436 LCORLQ8N3X6 602 aa11.99□□□□□ -0.49
CLCN6-202ENST00000346436 ZNF277Q9NRM2 450 aaPredicted RBP11.99□□□□□ -0.49
CLCN6-202ENST00000346436 TBC1D7Q9P0N9 293 aa11.99□□□□□ -0.49
CLCN6-202ENST00000346436 ATP6V0A2Q9Y487 856 aa11.99□□□□□ -0.49
CLCN6-202ENST00000346436 PCDHB6Q9Y5E3 794 aa11.99□□□□□ -0.49
CLCN6-202ENST00000346436 POLGP54098 1239 aaPredicted RBP11.99□□□□□ -0.49
CLCN6-202ENST00000346436 TAF1CQ15572 869 aaPredicted RBP11.99□□□□□ -0.49
CLCN6-202ENST00000346436 TBC1D10CQ8IV04 446 aa11.99□□□□□ -0.49
CLCN6-202ENST00000346436 SLFN12Q8IYM2 578 aa11.99□□□□□ -0.49
CLCN6-202ENST00000346436 AKT3Q9Y243 479 aa11.99□□□□□ -0.49
CLCN6-202ENST00000346436 TNS3Q68CZ2 1445 aa11.99□□□□□ -0.49
CLCN6-202ENST00000346436 CIAO1O76071 339 aa11.99□□□□□ -0.49
CLCN6-202ENST00000346436 CD19P15391 556 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms