RNA–Protein interactions for RNA: ENST00000346144.8

MADCAM1-202, Transcript of mucosal vascular addressin cell adhesion molecule 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MADCAM1, Length 1,309 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MADCAM1-202ENST00000346144 ACAD9Q9H845 621 aa27.17■■□□□ 1.94
MADCAM1-202ENST00000346144 NCOA5Q9HCD5 579 aaKnown RBP27.17■■□□□ 1.94
MADCAM1-202ENST00000346144 PPP1R11O60927 126 aaPredicted RBP27.16■■□□□ 1.94
MADCAM1-202ENST00000346144 TAL1P17542 331 aaPredicted RBP27.16■■□□□ 1.94
MADCAM1-202ENST00000346144 PKN2Q16513 984 aaKnown RBP27.16■■□□□ 1.94
MADCAM1-202ENST00000346144 USH1GQ495M9 461 aa27.16■■□□□ 1.94
MADCAM1-202ENST00000346144 MMP19Q99542 508 aa27.16■■□□□ 1.94
MADCAM1-202ENST00000346144 SLKQ9H2G2 1235 aaPredicted RBP27.16■■□□□ 1.94
MADCAM1-202ENST00000346144 SEC63Q9UGP8 760 aaKnown RBP27.16■■□□□ 1.94
MADCAM1-202ENST00000346144 GABRQQ9UN88 632 aa27.16■■□□□ 1.94
MADCAM1-202ENST00000346144 ABCB11O95342 1321 aa27.16■■□□□ 1.94
MADCAM1-202ENST00000346144 ST18O60284 1047 aa27.16■■□□□ 1.94
MADCAM1-202ENST00000346144 PFKFB2O60825 505 aa27.16■■□□□ 1.94
MADCAM1-202ENST00000346144 TRAF1Q13077 416 aa27.16■■□□□ 1.94
MADCAM1-202ENST00000346144 PIBF1Q8WXW3 757 aa27.16■■□□□ 1.94
MADCAM1-202ENST00000346144 USP6NLQ92738 828 aa27.16■■□□□ 1.94
MADCAM1-202ENST00000346144 LIMCH1Q9UPQ0 1083 aa27.16■■□□□ 1.94
MADCAM1-202ENST00000346144 PTPN22Q9Y2R2 807 aa27.16■■□□□ 1.94
MADCAM1-202ENST00000346144 FLT3LGP49771 235 aa27.15■■□□□ 1.94
MADCAM1-202ENST00000346144 KCTD2Q14681 263 aa27.15■■□□□ 1.94
MADCAM1-202ENST00000346144 NTRK3Q16288 839 aa27.15■■□□□ 1.94
MADCAM1-202ENST00000346144 ME3Q16798 604 aa27.15■■□□□ 1.94
MADCAM1-202ENST00000346144 MUM1L1Q5H9M0 696 aa27.15■■□□□ 1.94
MADCAM1-202ENST00000346144 IFNAR1P17181 557 aa27.14■■□□□ 1.93
MADCAM1-202ENST00000346144 ADORA2AP29274 412 aa27.14■■□□□ 1.93
MADCAM1-202ENST00000346144 SCRN1Q12765 414 aa27.14■■□□□ 1.93
MADCAM1-202ENST00000346144 MAP2K5Q13163 448 aa27.14■■□□□ 1.93
MADCAM1-202ENST00000346144 IRF5Q13568 498 aa27.14■■□□□ 1.93
MADCAM1-202ENST00000346144 CLEC4DQ8WXI8 215 aa27.14■■□□□ 1.93
MADCAM1-202ENST00000346144 PCDHA1Q9Y5I3 950 aa27.14■■□□□ 1.93
MADCAM1-202ENST00000346144 PLXNA1Q9UIW2 1896 aa27.14■■□□□ 1.93
MADCAM1-202ENST00000346144 LARGE1O95461 756 aa27.13■■□□□ 1.93
MADCAM1-202ENST00000346144 RGS2P41220 211 aa27.13■■□□□ 1.93
MADCAM1-202ENST00000346144 MRPL11Q9Y3B7 192 aaKnown RBP27.13■■□□□ 1.93
MADCAM1-202ENST00000346144 CPLX1O14810 134 aa27.12■■□□□ 1.93
MADCAM1-202ENST00000346144 FBXO46Q6PJ61 603 aaPredicted RBP27.12■■□□□ 1.93
MADCAM1-202ENST00000346144 CPLX2Q6PUV4 134 aaKnown RBP27.12■■□□□ 1.93
MADCAM1-202ENST00000346144 ANKRD35Q8N283 1001 aa27.12■■□□□ 1.93
MADCAM1-202ENST00000346144 RAET1EQ8TD07 263 aa27.12■■□□□ 1.93
MADCAM1-202ENST00000346144 A1CFQ9NQ94 594 aaKnown RBP27.12■■□□□ 1.93
MADCAM1-202ENST00000346144 PTCH2Q9Y6C5 1203 aa27.12■■□□□ 1.93
MADCAM1-202ENST00000346144 V9GY48 417 aaPredicted RBP27.12■■□□□ 1.93
MADCAM1-202ENST00000346144 PFASO15067 1338 aa27.11■■□□□ 1.93
MADCAM1-202ENST00000346144 hCG_1642624A0A1W2PR95 340 aa27.11■■□□□ 1.93
MADCAM1-202ENST00000346144 NFIBO00712 420 aa27.11■■□□□ 1.93
MADCAM1-202ENST00000346144 HOXC6P09630 235 aa27.11■■□□□ 1.93
MADCAM1-202ENST00000346144 XRCC5P13010 732 aaKnown RBP27.11■■□□□ 1.93
MADCAM1-202ENST00000346144 GTF3C6Q969F1 213 aa27.11■■□□□ 1.93
MADCAM1-202ENST00000346144 ZSCAN31Q96LW9 406 aaPredicted RBP27.11■■□□□ 1.93
MADCAM1-202ENST00000346144 APBA2Q99767 749 aa27.11■■□□□ 1.93
MADCAM1-202ENST00000346144 RNF26Q9BY78 433 aaPredicted RBP27.11■■□□□ 1.93
MADCAM1-202ENST00000346144 RBM27Q9P2N5 1060 aaKnown RBP27.11■■□□□ 1.93
MADCAM1-202ENST00000346144 PRPF3O43395 683 aaKnown RBP27.1■■□□□ 1.93
MADCAM1-202ENST00000346144 DPP9Q86TI2 863 aa27.1■■□□□ 1.93
MADCAM1-202ENST00000346144 RGS22Q8NE09 1264 aa27.1■■□□□ 1.93
MADCAM1-202ENST00000346144 PHKBQ93100 1093 aa27.1■■□□□ 1.93
MADCAM1-202ENST00000346144 DDX11Q96FC9 970 aa27.1■■□□□ 1.93
MADCAM1-202ENST00000346144 MAF1Q9H063 256 aa27.1■■□□□ 1.93
MADCAM1-202ENST00000346144 SLC5A4Q9NY91 659 aa27.1■■□□□ 1.93
MADCAM1-202ENST00000346144 DNAJC25-GNG10A0A024R161 153 aa27.09■■□□□ 1.93
MADCAM1-202ENST00000346144 COBLO75128 1261 aa27.09■■□□□ 1.93
MADCAM1-202ENST00000346144 CYP2B6P20813 491 aa27.09■■□□□ 1.93
MADCAM1-202ENST00000346144 NSMFQ6X4W1 530 aa27.09■■□□□ 1.93
MADCAM1-202ENST00000346144 NECAB1Q8N987 351 aa27.09■■□□□ 1.93
MADCAM1-202ENST00000346144 CYP39A1Q9NYL5 469 aa27.09■■□□□ 1.93
MADCAM1-202ENST00000346144 LCTP09848 1927 aa27.09■■□□□ 1.93
MADCAM1-202ENST00000346144 CDKL5O76039 1030 aa27.08■■□□□ 1.93
MADCAM1-202ENST00000346144 PGK2P07205 417 aa27.08■■□□□ 1.93
MADCAM1-202ENST00000346144 MCM2P49736 904 aa27.08■■□□□ 1.93
MADCAM1-202ENST00000346144 MCF2L2Q86YR7 1114 aa27.08■■□□□ 1.93
MADCAM1-202ENST00000346144 SLC26A6Q9BXS9 759 aa27.08■■□□□ 1.93
MADCAM1-202ENST00000346144 MCOLN1Q9GZU1 580 aa27.08■■□□□ 1.93
MADCAM1-202ENST00000346144 SH2B1Q9NRF2 756 aaPredicted RBP27.08■■□□□ 1.93
MADCAM1-202ENST00000346144 hCG_1984214I3L0E3 225 aa27.07■■□□□ 1.92
MADCAM1-202ENST00000346144 OPLAHO14841 1288 aa27.07■■□□□ 1.92
MADCAM1-202ENST00000346144 CD2BP2O95400 341 aaKnown RBP27.07■■□□□ 1.92
MADCAM1-202ENST00000346144 AKAP17AQ02040 695 aaKnown RBP27.07■■□□□ 1.92
MADCAM1-202ENST00000346144 PFKFB3Q16875 520 aaPredicted RBP27.07■■□□□ 1.92
MADCAM1-202ENST00000346144 ZNF792Q3KQV3 632 aa27.07■■□□□ 1.92
MADCAM1-202ENST00000346144 TRIM22Q8IYM9 498 aa27.07■■□□□ 1.92
MADCAM1-202ENST00000346144 ZNF713Q8N859 430 aaPredicted RBP27.07■■□□□ 1.92
MADCAM1-202ENST00000346144 NPLOC4Q8TAT6 608 aa27.07■■□□□ 1.92
MADCAM1-202ENST00000346144 PXYLP1Q8TE99 480 aa27.07■■□□□ 1.92
MADCAM1-202ENST00000346144 DIS3Q9Y2L1 958 aaKnown RBP27.07■■□□□ 1.92
MADCAM1-202ENST00000346144 ADCY3O60266 1144 aa27.06■■□□□ 1.92
MADCAM1-202ENST00000346144 SCG2P13521 617 aa27.06■■□□□ 1.92
MADCAM1-202ENST00000346144 SSRP1Q08945 709 aaKnown RBP27.06■■□□□ 1.92
MADCAM1-202ENST00000346144 BAATQ14032 418 aaPredicted RBP27.06■■□□□ 1.92
MADCAM1-202ENST00000346144 WWC2Q6AWC2 1192 aa27.06■■□□□ 1.92
MADCAM1-202ENST00000346144 RNF207Q6ZRF8 634 aa27.06■■□□□ 1.92
MADCAM1-202ENST00000346144 HEATR3Q7Z4Q2 680 aa27.06■■□□□ 1.92
MADCAM1-202ENST00000346144 TRMT44Q8IYL2 757 aaKnown RBP27.06■■□□□ 1.92
MADCAM1-202ENST00000346144 SLAIN1Q8ND83 568 aa27.06■■□□□ 1.92
MADCAM1-202ENST00000346144 GPKOWQ92917 476 aaPredicted RBP eCLIP27.06■■□□□ 1.92
MADCAM1-202ENST00000346144 HTTP42858 3142 aa27.05■■□□□ 1.92
MADCAM1-202ENST00000346144 PTPDC1A2A3K4 754 aa27.05■■□□□ 1.92
MADCAM1-202ENST00000346144 POTEB2H3BUK9 544 aa27.05■■□□□ 1.92
MADCAM1-202ENST00000346144 GHRHRQ02643 423 aa27.05■■□□□ 1.92
MADCAM1-202ENST00000346144 ST3GAL1Q11201 340 aa27.05■■□□□ 1.92
MADCAM1-202ENST00000346144 PKN1Q16512 942 aa27.05■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms