RNA–Protein interactions for RNA: ENST00000343090.10

UBE4B-202, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best) BASIC

Gene UBE4B, Length 5,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-202ENST00000343090 GLT8D2Q9H1C3 349 aa8.88□□□□□ -0.99
UBE4B-202ENST00000343090 AXIN2Q9Y2T1 843 aa8.88□□□□□ -0.99
UBE4B-202ENST00000343090 LRRC7Q96NW7 1537 aa8.88□□□□□ -0.99
UBE4B-202ENST00000343090 IKBKBO14920 756 aa8.88□□□□□ -0.99
UBE4B-202ENST00000343090 XRCC5P13010 732 aaKnown RBP8.88□□□□□ -0.99
UBE4B-202ENST00000343090 SLC8A1P32418 973 aa8.88□□□□□ -0.99
UBE4B-202ENST00000343090 LONP1P36776 959 aaKnown RBP8.88□□□□□ -0.99
UBE4B-202ENST00000343090 LACTBP83111 547 aaPredicted RBP8.88□□□□□ -0.99
UBE4B-202ENST00000343090 RASGRF1Q13972 1273 aa8.88□□□□□ -0.99
UBE4B-202ENST00000343090 RNF26Q9BY78 433 aaPredicted RBP8.88□□□□□ -0.99
UBE4B-202ENST00000343090 TSPOAP1O95153 1857 aa8.88□□□□□ -0.99
UBE4B-202ENST00000343090 SLC20A2Q08357 652 aa8.88□□□□□ -0.99
UBE4B-202ENST00000343090 KRT71Q3SY84 523 aa8.88□□□□□ -0.99
UBE4B-202ENST00000343090 DYNLL2Q96FJ2 89 aa8.88□□□□□ -0.99
UBE4B-202ENST00000343090 ATP8A2Q9NTI2 1148 aa8.88□□□□□ -0.99
UBE4B-202ENST00000343090 HEG1Q9ULI3 1381 aa8.88□□□□□ -0.99
UBE4B-202ENST00000343090 FAM169AQ9Y6X4 670 aa8.88□□□□□ -0.99
UBE4B-202ENST00000343090 GAS7O60861 476 aa8.87□□□□□ -0.99
UBE4B-202ENST00000343090 CASP1P29466 404 aa8.87□□□□□ -0.99
UBE4B-202ENST00000343090 RASSF7Q02833 373 aa8.87□□□□□ -0.99
UBE4B-202ENST00000343090 HLFQ16534 295 aa8.87□□□□□ -0.99
UBE4B-202ENST00000343090 MGARPQ8TDB4 240 aa8.87□□□□□ -0.99
UBE4B-202ENST00000343090 TACO1Q9BSH4 297 aaKnown RBP8.87□□□□□ -0.99
UBE4B-202ENST00000343090 MAK16Q9BXY0 300 aaKnown RBP8.87□□□□□ -0.99
UBE4B-202ENST00000343090 DPH5Q9H2P9 285 aa8.87□□□□□ -0.99
UBE4B-202ENST00000343090 HYOU1Q9Y4L1 999 aa8.87□□□□□ -0.99
UBE4B-202ENST00000343090 ERCC5P28715 1186 aaPredicted RBP8.87□□□□□ -0.99
UBE4B-202ENST00000343090 KSR1Q8IVT5 923 aa8.87□□□□□ -0.99
UBE4B-202ENST00000343090 UHMK1Q8TAS1 419 aaKnown RBP8.87□□□□□ -0.99
UBE4B-202ENST00000343090 TBC1D22AQ8WUA7 517 aa8.87□□□□□ -0.99
UBE4B-202ENST00000343090 GSDMAQ96QA5 445 aa8.87□□□□□ -0.99
UBE4B-202ENST00000343090 HAUS4Q9H6D7 363 aa8.87□□□□□ -0.99
UBE4B-202ENST00000343090 CYP27B1O15528 508 aa8.87□□□□□ -0.99
UBE4B-202ENST00000343090 USP17L8P0C7I0 530 aa8.87□□□□□ -0.99
UBE4B-202ENST00000343090 IFT88Q13099 833 aa8.87□□□□□ -0.99
UBE4B-202ENST00000343090 ADAM9Q13443 819 aa8.87□□□□□ -0.99
UBE4B-202ENST00000343090 SETDB1Q15047 1291 aa8.87□□□□□ -0.99
UBE4B-202ENST00000343090 NAA35Q5VZE5 725 aa8.87□□□□□ -0.99
UBE4B-202ENST00000343090 TBC1D10CQ8IV04 446 aa8.87□□□□□ -0.99
UBE4B-202ENST00000343090 LARGE2Q8N3Y3 721 aa8.87□□□□□ -0.99
UBE4B-202ENST00000343090 PIGBQ92521 554 aa8.87□□□□□ -0.99
UBE4B-202ENST00000343090 IFT74Q96LB3 600 aa8.87□□□□□ -0.99
UBE4B-202ENST00000343090 GINS2Q9Y248 185 aa8.87□□□□□ -0.99
UBE4B-202ENST00000343090 MADDQ8WXG6 1647 aa8.87□□□□□ -0.99
UBE4B-202ENST00000343090 H7C1W4 665 aa8.87□□□□□ -0.99
UBE4B-202ENST00000343090 PLA2G4AP47712 749 aa8.87□□□□□ -0.99
UBE4B-202ENST00000343090 STRN3Q13033 797 aa8.87□□□□□ -0.99
UBE4B-202ENST00000343090 LMNTD2Q8IXW0 634 aa8.87□□□□□ -0.99
UBE4B-202ENST00000343090 TEKT1Q969V4 418 aa8.87□□□□□ -0.99
UBE4B-202ENST00000343090 CARD10Q9BWT7 1032 aa8.87□□□□□ -0.99
UBE4B-202ENST00000343090 ARMCX3Q9UH62 379 aaPredicted RBP8.87□□□□□ -0.99
UBE4B-202ENST00000343090 TSKSQ9UJT2 592 aa8.87□□□□□ -0.99
UBE4B-202ENST00000343090 KIAA1024Q9UPX6 916 aa8.87□□□□□ -0.99
UBE4B-202ENST00000343090 THRAP3Q9Y2W1 955 aaKnown RBP8.87□□□□□ -0.99
UBE4B-202ENST00000343090 CHD1O14646 1710 aa8.86□□□□□ -0.99
UBE4B-202ENST00000343090 KRIT1O00522 736 aa8.86□□□□□ -0.99
UBE4B-202ENST00000343090 PLEKHA8P1O95397 391 aa8.86□□□□□ -0.99
UBE4B-202ENST00000343090 SLC16A2P36021 539 aa8.86□□□□□ -0.99
UBE4B-202ENST00000343090 FAM26FQ5R3K3 315 aa8.86□□□□□ -0.99
UBE4B-202ENST00000343090 INTS8Q75QN2 995 aaKnown RBP8.86□□□□□ -0.99
UBE4B-202ENST00000343090 PCDHA4Q9UN74 947 aa8.86□□□□□ -0.99
UBE4B-202ENST00000343090 CHGBP05060 677 aa8.86□□□□□ -0.99
UBE4B-202ENST00000343090 BCRP11274 1271 aa8.86□□□□□ -0.99
UBE4B-202ENST00000343090 IFNAR1P17181 557 aa8.86□□□□□ -0.99
UBE4B-202ENST00000343090 CTNNA1P35221 906 aaKnown RBP8.86□□□□□ -0.99
UBE4B-202ENST00000343090 IL6STP40189 918 aaPredicted RBP8.86□□□□□ -0.99
UBE4B-202ENST00000343090 STAT1P42224 750 aa8.86□□□□□ -0.99
UBE4B-202ENST00000343090 UBXN2AP68543 259 aa8.86□□□□□ -0.99
UBE4B-202ENST00000343090 ATP11AP98196 1134 aa8.86□□□□□ -0.99
UBE4B-202ENST00000343090 EHHADHQ08426 723 aa8.86□□□□□ -0.99
UBE4B-202ENST00000343090 TBC1D10BQ4KMP7 808 aaPredicted RBP8.86□□□□□ -0.99
UBE4B-202ENST00000343090 PPP1R21Q6ZMI0 780 aa8.86□□□□□ -0.99
UBE4B-202ENST00000343090 VSTM4Q8IW00 320 aa8.86□□□□□ -0.99
UBE4B-202ENST00000343090 TTLL11Q8NHH1 800 aa8.86□□□□□ -0.99
UBE4B-202ENST00000343090 GJA10Q969M2 543 aa8.86□□□□□ -0.99
UBE4B-202ENST00000343090 AMFRQ9UKV5 643 aa8.86□□□□□ -0.99
UBE4B-202ENST00000343090 ZBTB12Q9Y330 459 aaPredicted RBP8.86□□□□□ -0.99
UBE4B-202ENST00000343090 KDM3AQ9Y4C1 1321 aa8.86□□□□□ -0.99
UBE4B-202ENST00000343090 H0YIN7 160 aa8.86□□□□□ -0.99
UBE4B-202ENST00000343090 CXCR5P32302 372 aa8.86□□□□□ -0.99
UBE4B-202ENST00000343090 ARL1P40616 181 aaPredicted RBP8.86□□□□□ -0.99
UBE4B-202ENST00000343090 GRM1Q13255 1194 aa8.86□□□□□ -0.99
UBE4B-202ENST00000343090 LIN9Q5TKA1 542 aa8.86□□□□□ -0.99
UBE4B-202ENST00000343090 KCTD16Q68DU8 428 aa8.86□□□□□ -0.99
UBE4B-202ENST00000343090 RUFY4Q6ZNE9 571 aa8.86□□□□□ -0.99
UBE4B-202ENST00000343090 KCTD1Q719H9 257 aa8.86□□□□□ -0.99
UBE4B-202ENST00000343090 CYB5R4Q7L1T6 521 aa8.86□□□□□ -0.99
UBE4B-202ENST00000343090 APBB1IPQ7Z5R6 666 aaPredicted RBP8.86□□□□□ -0.99
UBE4B-202ENST00000343090 SYCE1Q8N0S2 351 aa8.86□□□□□ -0.99
UBE4B-202ENST00000343090 EXOC7Q9UPT5 735 aa8.86□□□□□ -0.99
UBE4B-202ENST00000343090 NEDD4P46934 1319 aa8.86□□□□□ -0.99
UBE4B-202ENST00000343090 TCP10L2B9ZVM9 353 aa8.86□□□□□ -0.99
UBE4B-202ENST00000343090 ATP2A2P16615 1042 aaKnown RBP8.86□□□□□ -0.99
UBE4B-202ENST00000343090 TRPC3Q13507 836 aa8.86□□□□□ -0.99
UBE4B-202ENST00000343090 DIXDC1Q155Q3 683 aa8.86□□□□□ -0.99
UBE4B-202ENST00000343090 SPICE1Q8N0Z3 855 aa8.86□□□□□ -0.99
UBE4B-202ENST00000343090 GPR101Q96P66 508 aaPredicted RBP8.86□□□□□ -0.99
UBE4B-202ENST00000343090 PIGSQ96S52 555 aa8.86□□□□□ -0.99
UBE4B-202ENST00000343090 SMC6Q96SB8 1091 aa8.86□□□□□ -0.99
UBE4B-202ENST00000343090 NUCKS1Q9H1E3 243 aaKnown RBP8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms