RNA–Protein interactions for RNA: ENST00000339436.11

SRSF3-201, Transcript of serine and arginine rich splicing factor 3, humanhuman

TSL 2

Gene SRSF3, Length 1,518 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF3-201ENST00000339436 TRERF1Q96PN7 1200 aa14.92□□□□□ -0.02
SRSF3-201ENST00000339436 UPF2Q9HAU5 1272 aaKnown RBP14.92□□□□□ -0.02
SRSF3-201ENST00000339436 VAT1LQ9HCJ6 419 aa14.92□□□□□ -0.02
SRSF3-201ENST00000339436 RBM28Q9NW13 759 aaKnown RBP14.92□□□□□ -0.02
SRSF3-201ENST00000339436 NAP1L2Q9ULW6 460 aaPredicted RBP14.92□□□□□ -0.02
SRSF3-201ENST00000339436 CNTNAP5Q8WYK1 1306 aa14.92□□□□□ -0.02
SRSF3-201ENST00000339436 METAP2P50579 478 aaKnown RBP eCLIP14.92□□□□□ -0.02
SRSF3-201ENST00000339436 USH1GQ495M9 461 aa14.92□□□□□ -0.02
SRSF3-201ENST00000339436 MUM1L1Q5H9M0 696 aa14.92□□□□□ -0.02
SRSF3-201ENST00000339436 HOMER1Q86YM7 354 aa14.92□□□□□ -0.02
SRSF3-201ENST00000339436 SRBD1Q8N5C6 995 aaKnown RBP14.92□□□□□ -0.02
SRSF3-201ENST00000339436 SH3TC2Q8TF17 1288 aa14.92□□□□□ -0.02
SRSF3-201ENST00000339436 TRIB2Q92519 343 aa14.92□□□□□ -0.02
SRSF3-201ENST00000339436 PIGSQ96S52 555 aa14.92□□□□□ -0.02
SRSF3-201ENST00000339436 A1CFQ9NQ94 594 aaKnown RBP14.92□□□□□ -0.02
SRSF3-201ENST00000339436 PFASO15067 1338 aa14.91□□□□□ -0.02
SRSF3-201ENST00000339436 ABCB11O95342 1321 aa14.91□□□□□ -0.02
SRSF3-201ENST00000339436 DNAJC25-GNG10A0A024R161 153 aa14.91□□□□□ -0.02
SRSF3-201ENST00000339436 NFIBO00712 420 aa14.91□□□□□ -0.02
SRSF3-201ENST00000339436 PPP1R11O60927 126 aaPredicted RBP14.91□□□□□ -0.02
SRSF3-201ENST00000339436 COBLO75128 1261 aa14.91□□□□□ -0.02
SRSF3-201ENST00000339436 HMGCRP04035 888 aa14.91□□□□□ -0.02
SRSF3-201ENST00000339436 DPP9Q86TI2 863 aa14.91□□□□□ -0.02
SRSF3-201ENST00000339436 FBXO11Q86XK2 927 aa14.91□□□□□ -0.02
SRSF3-201ENST00000339436 CMTR1Q8N1G2 835 aaKnown RBP14.91□□□□□ -0.02
SRSF3-201ENST00000339436 ANKRD35Q8N283 1001 aa14.91□□□□□ -0.02
SRSF3-201ENST00000339436 NPLOC4Q8TAT6 608 aa14.91□□□□□ -0.02
SRSF3-201ENST00000339436 CLEC4DQ8WXI8 215 aa14.91□□□□□ -0.02
SRSF3-201ENST00000339436 ZNF333Q96JL9 665 aa14.91□□□□□ -0.02
SRSF3-201ENST00000339436 KIF2CQ99661 725 aa14.91□□□□□ -0.02
SRSF3-201ENST00000339436 BACH2Q9BYV9 841 aa14.91□□□□□ -0.02
SRSF3-201ENST00000339436 INHAP05111 366 aa14.9□□□□□ -0.02
SRSF3-201ENST00000339436 PGK2P07205 417 aa14.9□□□□□ -0.02
SRSF3-201ENST00000339436 CDC27P30260 824 aa14.9□□□□□ -0.02
SRSF3-201ENST00000339436 PPP2R5BQ15173 497 aa14.9□□□□□ -0.02
SRSF3-201ENST00000339436 CCL14Q16627 93 aa14.9□□□□□ -0.02
SRSF3-201ENST00000339436 TRMT44Q8IYL2 757 aaKnown RBP14.9□□□□□ -0.02
SRSF3-201ENST00000339436 AMNQ9BXJ7 453 aa14.9□□□□□ -0.02
SRSF3-201ENST00000339436 ALDH8A1Q9H2A2 487 aaPredicted RBP14.9□□□□□ -0.02
SRSF3-201ENST00000339436 FAM217BQ9NTX9 383 aaPredicted RBP14.9□□□□□ -0.02
SRSF3-201ENST00000339436 SLC5A4Q9NY91 659 aa14.9□□□□□ -0.02
SRSF3-201ENST00000339436 KIAA1217Q5T5P2 1943 aa14.89□□□□□ -0.03
SRSF3-201ENST00000339436 PNMA6FA0A0J9YX94 578 aa14.89□□□□□ -0.03
SRSF3-201ENST00000339436 CCDC196A0A1B0GTZ2 297 aa14.89□□□□□ -0.03
SRSF3-201ENST00000339436 PDIA3P30101 505 aaKnown RBP14.89□□□□□ -0.03
SRSF3-201ENST00000339436 AK2P54819 239 aa14.89□□□□□ -0.03
SRSF3-201ENST00000339436 FUT2Q10981 343 aa14.89□□□□□ -0.03
SRSF3-201ENST00000339436 ZNF792Q3KQV3 632 aa14.89□□□□□ -0.03
SRSF3-201ENST00000339436 RRP36Q96EU6 259 aaKnown RBP14.89□□□□□ -0.03
SRSF3-201ENST00000339436 DDX11Q96FC9 970 aa14.89□□□□□ -0.03
SRSF3-201ENST00000339436 MAML3Q96JK9 1138 aa14.89□□□□□ -0.03
SRSF3-201ENST00000339436 TBC1D32Q96NH3 1257 aa14.89□□□□□ -0.03
SRSF3-201ENST00000339436 CYP39A1Q9NYL5 469 aa14.89□□□□□ -0.03
SRSF3-201ENST00000339436 FLRT1Q9NZU1 646 aa14.89□□□□□ -0.03
SRSF3-201ENST00000339436 SEC63Q9UGP8 760 aaKnown RBP14.89□□□□□ -0.03
SRSF3-201ENST00000339436 DIS3Q9Y2L1 958 aaKnown RBP14.89□□□□□ -0.03
SRSF3-201ENST00000339436 IGHA2P01877 340 aa14.88□□□□□ -0.03
SRSF3-201ENST00000339436 NEK4P51957 841 aa14.88□□□□□ -0.03
SRSF3-201ENST00000339436 ANKRD1Q15327 319 aa14.88□□□□□ -0.03
SRSF3-201ENST00000339436 OLFML2BQ68BL8 750 aa14.88□□□□□ -0.03
SRSF3-201ENST00000339436 NSMFQ6X4W1 530 aa14.88□□□□□ -0.03
SRSF3-201ENST00000339436 PIBF1Q8WXW3 757 aa14.88□□□□□ -0.03
SRSF3-201ENST00000339436 ZNF274Q96GC6 653 aaPredicted RBP14.88□□□□□ -0.03
SRSF3-201ENST00000339436 FGD4Q96M96 766 aa14.88□□□□□ -0.03
SRSF3-201ENST00000339436 LARP6Q9BRS8 491 aaKnown RBP14.88□□□□□ -0.03
SRSF3-201ENST00000339436 PCDHA1Q9Y5I3 950 aa14.88□□□□□ -0.03
SRSF3-201ENST00000339436 ADD1P35611 737 aaKnown RBP14.87□□□□□ -0.03
SRSF3-201ENST00000339436 TRAF1Q13077 416 aa14.87□□□□□ -0.03
SRSF3-201ENST00000339436 MAP3K21Q5TCX8 1036 aa14.87□□□□□ -0.03
SRSF3-201ENST00000339436 SLC30A10Q6XR72 485 aa14.87□□□□□ -0.03
SRSF3-201ENST00000339436 CCDC82Q8N4S0 544 aa14.87□□□□□ -0.03
SRSF3-201ENST00000339436 FAM133AQ8N9E0 248 aa14.87□□□□□ -0.03
SRSF3-201ENST00000339436 BIN2Q9UBW5 565 aaPredicted RBP14.87□□□□□ -0.03
SRSF3-201ENST00000339436 TPCN1Q9ULQ1 816 aa14.87□□□□□ -0.03
SRSF3-201ENST00000339436 MRPL11Q9Y3B7 192 aaKnown RBP14.87□□□□□ -0.03
SRSF3-201ENST00000339436 PTPDC1A2A3K4 754 aa14.87□□□□□ -0.03
SRSF3-201ENST00000339436 POTEB2H3BUK9 544 aa14.87□□□□□ -0.03
SRSF3-201ENST00000339436 OPLAHO14841 1288 aa14.87□□□□□ -0.03
SRSF3-201ENST00000339436 PRKAR2AP13861 404 aaKnown RBP14.87□□□□□ -0.03
SRSF3-201ENST00000339436 UBXN2AP68543 259 aa14.87□□□□□ -0.03
SRSF3-201ENST00000339436 TRIM32Q13049 653 aa14.87□□□□□ -0.03
SRSF3-201ENST00000339436 RNF207Q6ZRF8 634 aa14.87□□□□□ -0.03
SRSF3-201ENST00000339436 ZNF467Q7Z7K2 595 aaPredicted RBP14.87□□□□□ -0.03
SRSF3-201ENST00000339436 NCOA5Q9HCD5 579 aaKnown RBP14.87□□□□□ -0.03
SRSF3-201ENST00000339436 ASTN1O14525 1302 aa14.86□□□□□ -0.03
SRSF3-201ENST00000339436 DNAH12Q6ZR08 3092 aa14.86□□□□□ -0.03
SRSF3-201ENST00000339436 hCG_1642624A0A1W2PR95 340 aa14.86□□□□□ -0.03
SRSF3-201ENST00000339436 RPS6P62753 249 aaKnown RBP14.86□□□□□ -0.03
SRSF3-201ENST00000339436 CCT2P78371 535 aaKnown RBP14.86□□□□□ -0.03
SRSF3-201ENST00000339436 CNTN2Q02246 1040 aa14.86□□□□□ -0.03
SRSF3-201ENST00000339436 GHRHRQ02643 423 aa14.86□□□□□ -0.03
SRSF3-201ENST00000339436 BAATQ14032 418 aaPredicted RBP14.86□□□□□ -0.03
SRSF3-201ENST00000339436 NTRK3Q16288 839 aa14.86□□□□□ -0.03
SRSF3-201ENST00000339436 MFSD14CQ5VZR4 134 aa14.86□□□□□ -0.03
SRSF3-201ENST00000339436 RGS22Q8NE09 1264 aa14.86□□□□□ -0.03
SRSF3-201ENST00000339436 MAF1Q9H063 256 aa14.86□□□□□ -0.03
SRSF3-201ENST00000339436 MYCP01106 439 aaPredicted RBP14.85□□□□□ -0.03
SRSF3-201ENST00000339436 CYP2C19P33261 490 aa14.85□□□□□ -0.03
SRSF3-201ENST00000339436 STK3Q13188 491 aa14.85□□□□□ -0.03
SRSF3-201ENST00000339436 RABEP1Q15276 862 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms