RNA–Protein interactions for RNA: ENST00000336520.7

MRPL55-203, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-203ENST00000336520 LRRC41Q15345 812 aa13.25□□□□□ -0.29
MRPL55-203ENST00000336520 CDC37Q16543 378 aaPredicted RBP13.25□□□□□ -0.29
MRPL55-203ENST00000336520 USH1GQ495M9 461 aa13.25□□□□□ -0.29
MRPL55-203ENST00000336520 TMEM67Q5HYA8 995 aa13.25□□□□□ -0.29
MRPL55-203ENST00000336520 CHST3Q7LGC8 479 aa13.25□□□□□ -0.29
MRPL55-203ENST00000336520 LENG1Q96BZ8 264 aaPredicted RBP13.25□□□□□ -0.29
MRPL55-203ENST00000336520 ABHD16BQ9H3Z7 469 aa13.25□□□□□ -0.29
MRPL55-203ENST00000336520 SMCHD1A6NHR9 2005 aa13.24□□□□□ -0.29
MRPL55-203ENST00000336520 MCM3APO60318 1980 aa13.24□□□□□ -0.29
MRPL55-203ENST00000336520 ALPK3Q96L96 1907 aa13.24□□□□□ -0.29
MRPL55-203ENST00000336520 SLC27A2O14975 620 aa13.24□□□□□ -0.29
MRPL55-203ENST00000336520 PGK1P00558 417 aa13.24□□□□□ -0.29
MRPL55-203ENST00000336520 ATN1P54259 1190 aaPredicted RBP13.24□□□□□ -0.29
MRPL55-203ENST00000336520 LRRC26Q2I0M4 334 aa13.24□□□□□ -0.29
MRPL55-203ENST00000336520 CHRDL2Q6WN34 429 aa13.24□□□□□ -0.29
MRPL55-203ENST00000336520 RNF180Q86T96 592 aa13.24□□□□□ -0.29
MRPL55-203ENST00000336520 ADGRF4Q8IZF3 695 aa13.24□□□□□ -0.29
MRPL55-203ENST00000336520 VAT1LQ9HCJ6 419 aa13.24□□□□□ -0.29
MRPL55-203ENST00000336520 ADD3Q9UEY8 706 aaKnown RBP13.24□□□□□ -0.29
MRPL55-203ENST00000336520 ZMYND8Q9ULU4 1186 aaPredicted RBP13.24□□□□□ -0.29
MRPL55-203ENST00000336520 KLRF2D3W0D1 207 aa13.23□□□□□ -0.29
MRPL55-203ENST00000336520 CALML3P27482 149 aa13.23□□□□□ -0.29
MRPL55-203ENST00000336520 ADCYAP1R1P41586 468 aa13.23□□□□□ -0.29
MRPL55-203ENST00000336520 CCDC144BQ3MJ40 725 aa13.23□□□□□ -0.29
MRPL55-203ENST00000336520 RNF20Q5VTR2 975 aa13.23□□□□□ -0.29
MRPL55-203ENST00000336520 CREB3L3Q68CJ9 461 aa13.23□□□□□ -0.29
MRPL55-203ENST00000336520 SLC30A10Q6XR72 485 aa13.23□□□□□ -0.29
MRPL55-203ENST00000336520 RNF207Q6ZRF8 634 aa13.23□□□□□ -0.29
MRPL55-203ENST00000336520 NOL8Q76FK4 1167 aaKnown RBP13.23□□□□□ -0.29
MRPL55-203ENST00000336520 CATIPQ7Z7H3 387 aa13.23□□□□□ -0.29
MRPL55-203ENST00000336520 MB21D2Q8IYB1 491 aaPredicted RBP13.23□□□□□ -0.29
MRPL55-203ENST00000336520 CLEC4DQ8WXI8 215 aa13.23□□□□□ -0.29
MRPL55-203ENST00000336520 FERMT2Q96AC1 680 aa13.23□□□□□ -0.29
MRPL55-203ENST00000336520 COLQQ9Y215 455 aaPredicted RBP13.23□□□□□ -0.29
MRPL55-203ENST00000336520 ABCB11O95342 1321 aa13.22□□□□□ -0.29
MRPL55-203ENST00000336520 SYNRGQ9UMZ2 1314 aa13.22□□□□□ -0.29
MRPL55-203ENST00000336520 PRC1O43663 620 aa13.22□□□□□ -0.29
MRPL55-203ENST00000336520 DUSP11O75319 330 aaKnown RBP13.22□□□□□ -0.29
MRPL55-203ENST00000336520 CENPBP07199 599 aaPredicted RBP13.22□□□□□ -0.29
MRPL55-203ENST00000336520 MCM5P33992 734 aa13.22□□□□□ -0.29
MRPL55-203ENST00000336520 ANTXR2P58335 489 aa13.22□□□□□ -0.29
MRPL55-203ENST00000336520 GRM4Q14833 912 aa13.22□□□□□ -0.29
MRPL55-203ENST00000336520 QRICH1Q2TAL8 776 aa13.22□□□□□ -0.29
MRPL55-203ENST00000336520 HABP4Q5JVS0 413 aaKnown RBP13.22□□□□□ -0.29
MRPL55-203ENST00000336520 FBXO11Q86XK2 927 aa13.22□□□□□ -0.29
MRPL55-203ENST00000336520 STAG2Q8N3U4 1231 aa13.22□□□□□ -0.29
MRPL55-203ENST00000336520 PURBQ96QR8 312 aaKnown RBP13.22□□□□□ -0.29
MRPL55-203ENST00000336520 JMJD4Q9H9V9 463 aa13.22□□□□□ -0.29
MRPL55-203ENST00000336520 SPC25Q9HBM1 224 aa13.22□□□□□ -0.29
MRPL55-203ENST00000336520 SENP2Q9HC62 589 aa13.22□□□□□ -0.29
MRPL55-203ENST00000336520 DDX49Q9Y6V7 483 aaKnown RBP13.22□□□□□ -0.29
MRPL55-203ENST00000336520 TRIOBPQ9H2D6 2365 aa13.22□□□□□ -0.29
MRPL55-203ENST00000336520 ASTN1O14525 1302 aa13.21□□□□□ -0.29
MRPL55-203ENST00000336520 C6orf222P0C671 652 aaPredicted RBP13.21□□□□□ -0.29
MRPL55-203ENST00000336520 SYN1P17600 705 aa13.21□□□□□ -0.29
MRPL55-203ENST00000336520 RTP1P59025 263 aa13.21□□□□□ -0.29
MRPL55-203ENST00000336520 RPS6P62753 249 aaKnown RBP13.21□□□□□ -0.29
MRPL55-203ENST00000336520 TNFAIP2Q03169 654 aa13.21□□□□□ -0.29
MRPL55-203ENST00000336520 NECTIN1Q15223 517 aa13.21□□□□□ -0.29
MRPL55-203ENST00000336520 NFXL1Q6ZNB6 911 aa13.21□□□□□ -0.29
MRPL55-203ENST00000336520 EEPD1Q7L9B9 569 aa13.21□□□□□ -0.29
MRPL55-203ENST00000336520 FBXO16Q8IX29 292 aaPredicted RBP13.21□□□□□ -0.29
MRPL55-203ENST00000336520 NUP133Q8WUM0 1156 aa13.21□□□□□ -0.29
MRPL55-203ENST00000336520 MPHOSPH6Q99547 160 aaKnown RBP13.21□□□□□ -0.29
MRPL55-203ENST00000336520 MAD2L2Q9UI95 211 aa13.21□□□□□ -0.29
MRPL55-203ENST00000336520 PHF24Q9UPV7 400 aa13.21□□□□□ -0.29
MRPL55-203ENST00000336520 ATP11BQ9Y2G3 1177 aa13.21□□□□□ -0.29
MRPL55-203ENST00000336520 LOC102724159A0A0B4J2E5 919 aa13.2□□□□□ -0.3
MRPL55-203ENST00000336520 PALM3A6NDB9 673 aaPredicted RBP13.2□□□□□ -0.3
MRPL55-203ENST00000336520 B4DLN1 442 aa13.2□□□□□ -0.3
MRPL55-203ENST00000336520 ADAMTS4O75173 837 aa13.2□□□□□ -0.3
MRPL55-203ENST00000336520 ALDH5A1P51649 535 aaPredicted RBP13.2□□□□□ -0.3
MRPL55-203ENST00000336520 MRPL12P52815 198 aaKnown RBP13.2□□□□□ -0.3
MRPL55-203ENST00000336520 PDE4DQ08499 809 aa13.2□□□□□ -0.3
MRPL55-203ENST00000336520 PWP2Q15269 919 aaKnown RBP13.2□□□□□ -0.3
MRPL55-203ENST00000336520 SLC39A5Q6ZMH5 540 aa13.2□□□□□ -0.3
MRPL55-203ENST00000336520 HOMER1Q86YM7 354 aa13.2□□□□□ -0.3
MRPL55-203ENST00000336520 MCF2L2Q86YR7 1114 aa13.2□□□□□ -0.3
MRPL55-203ENST00000336520 IGDCC4Q8TDY8 1250 aa13.2□□□□□ -0.3
MRPL55-203ENST00000336520 TMEM87BQ96K49 555 aa13.2□□□□□ -0.3
MRPL55-203ENST00000336520 MTA3Q9BTC8 594 aa13.2□□□□□ -0.3
MRPL55-203ENST00000336520 AMNQ9BXJ7 453 aa13.2□□□□□ -0.3
MRPL55-203ENST00000336520 KATNBL1Q9H079 304 aa13.2□□□□□ -0.3
MRPL55-203ENST00000336520 VTA1Q9NP79 307 aa13.2□□□□□ -0.3
MRPL55-203ENST00000336520 MRPL11Q9Y3B7 192 aaKnown RBP13.2□□□□□ -0.3
MRPL55-203ENST00000336520 LCTP09848 1927 aa13.19□□□□□ -0.3
MRPL55-203ENST00000336520 MYH6P13533 1939 aa13.19□□□□□ -0.3
MRPL55-203ENST00000336520 A0A1W2PQ45 241 aaPredicted RBP13.19□□□□□ -0.3
MRPL55-203ENST00000336520 A0A1W2PQY0 241 aa13.19□□□□□ -0.3
MRPL55-203ENST00000336520 CCDC69A6NI79 296 aa13.19□□□□□ -0.3
MRPL55-203ENST00000336520 ZBTB5O15062 677 aa13.19□□□□□ -0.3
MRPL55-203ENST00000336520 ADCY6O43306 1168 aa13.19□□□□□ -0.3
MRPL55-203ENST00000336520 DDAH1O94760 285 aa13.19□□□□□ -0.3
MRPL55-203ENST00000336520 KIF5BP33176 963 aa13.19□□□□□ -0.3
MRPL55-203ENST00000336520 ACLYP53396 1101 aa13.19□□□□□ -0.3
MRPL55-203ENST00000336520 TROAPQ12815 778 aa13.19□□□□□ -0.3
MRPL55-203ENST00000336520 ZNF654Q8IZM8 581 aa13.19□□□□□ -0.3
MRPL55-203ENST00000336520 RGS22Q8NE09 1264 aa13.19□□□□□ -0.3
MRPL55-203ENST00000336520 CTCFLQ8NI51 663 aaPredicted RBP13.19□□□□□ -0.3
MRPL55-203ENST00000336520 MORC4Q8TE76 937 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms