RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 CSF1RP07333 972 aa15.29■□□□□ 0.04
SYNE3-201ENST00000334258 MTIF2P46199 727 aaKnown RBP15.29■□□□□ 0.04
SYNE3-201ENST00000334258 KLK7P49862 253 aa15.29■□□□□ 0.04
SYNE3-201ENST00000334258 DNM2P50570 870 aa15.29■□□□□ 0.04
SYNE3-201ENST00000334258 PMS1P54277 932 aaKnown RBP15.29■□□□□ 0.04
SYNE3-201ENST00000334258 PPARDQ03181 441 aa15.29■□□□□ 0.04
SYNE3-201ENST00000334258 IFIT1BQ5T764 474 aaKnown RBP15.29■□□□□ 0.04
SYNE3-201ENST00000334258 B4GALNT4Q76KP1 1039 aa15.29■□□□□ 0.04
SYNE3-201ENST00000334258 IRF2BP1Q8IU81 584 aa15.29■□□□□ 0.04
SYNE3-201ENST00000334258 ANO9A1A5B4 782 aa15.29■□□□□ 0.04
SYNE3-201ENST00000334258 PAFAH1B1P43034 410 aa15.29■□□□□ 0.04
SYNE3-201ENST00000334258 ATP2C1P98194 919 aaPredicted RBP15.29■□□□□ 0.04
SYNE3-201ENST00000334258 PKN1Q16512 942 aa15.29■□□□□ 0.04
SYNE3-201ENST00000334258 CSGALNACT2Q8N6G5 542 aa15.29■□□□□ 0.04
SYNE3-201ENST00000334258 PYM1Q9BRP8 204 aaKnown RBP15.29■□□□□ 0.04
SYNE3-201ENST00000334258 TUBGCP2Q9BSJ2 902 aa15.29■□□□□ 0.04
SYNE3-201ENST00000334258 SPEF2Q9C093 1822 aa15.29■□□□□ 0.04
SYNE3-201ENST00000334258 LTBP4Q8N2S1 1624 aa15.29■□□□□ 0.04
SYNE3-201ENST00000334258 IBSPP21815 317 aaPredicted RBP15.28■□□□□ 0.04
SYNE3-201ENST00000334258 SWT1Q5T5J6 900 aaKnown RBP15.28■□□□□ 0.04
SYNE3-201ENST00000334258 PDXDC2PQ6P474 469 aa15.28■□□□□ 0.04
SYNE3-201ENST00000334258 SPATA4Q8NEY3 305 aa15.28■□□□□ 0.04
SYNE3-201ENST00000334258 SDR42E1Q8WUS8 393 aa15.28■□□□□ 0.04
SYNE3-201ENST00000334258 EXOC1Q9NV70 894 aa15.28■□□□□ 0.04
SYNE3-201ENST00000334258 PARP4Q9UKK3 1724 aaKnown RBP15.28■□□□□ 0.04
SYNE3-201ENST00000334258 A0A1W2PQC6 194 aa15.28■□□□□ 0.04
SYNE3-201ENST00000334258 EEF1GP26641 437 aaKnown RBP15.28■□□□□ 0.04
SYNE3-201ENST00000334258 RASGRF1Q13972 1273 aa15.28■□□□□ 0.04
SYNE3-201ENST00000334258 LINC00116Q8NCU8 138 aa15.28■□□□□ 0.04
SYNE3-201ENST00000334258 CENPHQ9H3R5 247 aa15.28■□□□□ 0.04
SYNE3-201ENST00000334258 SNX12Q9UMY4 172 aa15.28■□□□□ 0.04
SYNE3-201ENST00000334258 ARFGEF2Q9Y6D5 1785 aa15.28■□□□□ 0.04
SYNE3-201ENST00000334258 ADAMTS7Q9UKP4 1686 aa15.28■□□□□ 0.04
SYNE3-201ENST00000334258 TYW1BQ6NUM6 668 aa15.28■□□□□ 0.04
SYNE3-201ENST00000334258 ANKRD13CQ8N6S4 541 aa15.28■□□□□ 0.04
SYNE3-201ENST00000334258 TRIM58Q8NG06 486 aa15.28■□□□□ 0.04
SYNE3-201ENST00000334258 IFT81Q8WYA0 676 aa15.28■□□□□ 0.04
SYNE3-201ENST00000334258 JPH2Q9BR39 696 aaPredicted RBP15.28■□□□□ 0.04
SYNE3-201ENST00000334258 IFIH1Q9BYX4 1025 aaKnown RBP15.28■□□□□ 0.04
SYNE3-201ENST00000334258 MLXIPQ9HAP2 919 aa15.28■□□□□ 0.04
SYNE3-201ENST00000334258 MYO1FO00160 1098 aa15.27■□□□□ 0.04
SYNE3-201ENST00000334258 PPP2R5AQ15172 486 aa15.27■□□□□ 0.04
SYNE3-201ENST00000334258 FNBP4Q8N3X1 1017 aaPredicted RBP15.27■□□□□ 0.04
SYNE3-201ENST00000334258 EHD2Q9NZN4 543 aa15.27■□□□□ 0.04
SYNE3-201ENST00000334258 ABCF2Q9UG63 623 aa15.27■□□□□ 0.04
SYNE3-201ENST00000334258 JAG2Q9Y219 1238 aa15.27■□□□□ 0.04
SYNE3-201ENST00000334258 DISP2A7MBM2 1401 aa15.27■□□□□ 0.04
SYNE3-201ENST00000334258 RTL9Q8NET4 1388 aa15.27■□□□□ 0.04
SYNE3-201ENST00000334258 AKR1B10O60218 316 aa15.27■□□□□ 0.03
SYNE3-201ENST00000334258 MOCS3O95396 460 aa15.27■□□□□ 0.03
SYNE3-201ENST00000334258 KRT14P02533 472 aa15.27■□□□□ 0.03
SYNE3-201ENST00000334258 GNAT2P19087 354 aa15.27■□□□□ 0.03
SYNE3-201ENST00000334258 VAV2P52735 878 aa15.27■□□□□ 0.03
SYNE3-201ENST00000334258 EPHB4P54760 987 aa15.27■□□□□ 0.03
SYNE3-201ENST00000334258 PUM3Q15397 648 aaKnown RBP15.27■□□□□ 0.03
SYNE3-201ENST00000334258 C8orf74Q6P047 294 aa15.27■□□□□ 0.03
SYNE3-201ENST00000334258 NFRKBQ6P4R8 1299 aa15.27■□□□□ 0.03
SYNE3-201ENST00000334258 CCDC170Q8IYT3 715 aa15.27■□□□□ 0.03
SYNE3-201ENST00000334258 ADSSL1Q8N142 457 aa15.27■□□□□ 0.03
SYNE3-201ENST00000334258 TSEN2Q8NCE0 465 aaKnown RBP15.27■□□□□ 0.03
SYNE3-201ENST00000334258 LPIN2Q92539 896 aa15.27■□□□□ 0.03
SYNE3-201ENST00000334258 ZNF512BQ96KM6 892 aaPredicted RBP15.27■□□□□ 0.03
SYNE3-201ENST00000334258 PHLPP1O60346 1717 aa15.27■□□□□ 0.03
SYNE3-201ENST00000334258 SMIM22K7EJ46 135 aa15.27■□□□□ 0.03
SYNE3-201ENST00000334258 PRPF3O43395 683 aaKnown RBP15.27■□□□□ 0.03
SYNE3-201ENST00000334258 RDXP35241 583 aaKnown RBP15.27■□□□□ 0.03
SYNE3-201ENST00000334258 CTSWP56202 376 aa15.27■□□□□ 0.03
SYNE3-201ENST00000334258 ZBED6P86452 979 aa15.27■□□□□ 0.03
SYNE3-201ENST00000334258 NNTQ13423 1086 aa15.27■□□□□ 0.03
SYNE3-201ENST00000334258 CFAP58Q5T655 872 aa15.27■□□□□ 0.03
SYNE3-201ENST00000334258 CREG2Q8IUH2 290 aa15.27■□□□□ 0.03
SYNE3-201ENST00000334258 GRIN2DO15399 1336 aa15.26■□□□□ 0.03
SYNE3-201ENST00000334258 SLC5A1P13866 664 aa15.26■□□□□ 0.03
SYNE3-201ENST00000334258 KCNV1Q6PIU1 500 aa15.26■□□□□ 0.03
SYNE3-201ENST00000334258 C3orf67Q6ZVT6 689 aa15.26■□□□□ 0.03
SYNE3-201ENST00000334258 C2CD5Q86YS7 1000 aa15.26■□□□□ 0.03
SYNE3-201ENST00000334258 CABS1Q96KC9 395 aa15.26■□□□□ 0.03
SYNE3-201ENST00000334258 ALS2CR12Q96Q35 445 aa15.26■□□□□ 0.03
SYNE3-201ENST00000334258 NOC4LQ9BVI4 516 aaKnown RBP15.26■□□□□ 0.03
SYNE3-201ENST00000334258 NUP58Q9BVL2 599 aa15.26■□□□□ 0.03
SYNE3-201ENST00000334258 TSGA10Q9BZW7 698 aa15.26■□□□□ 0.03
SYNE3-201ENST00000334258 STIM2Q9P246 746 aa15.26■□□□□ 0.03
SYNE3-201ENST00000334258 CAPN6Q9Y6Q1 641 aa15.26■□□□□ 0.03
SYNE3-201ENST00000334258 BAZ2BQ9UIF8 2168 aaKnown RBP15.26■□□□□ 0.03
SYNE3-201ENST00000334258 COL16A1Q07092 1604 aaPredicted RBP15.26■□□□□ 0.03
SYNE3-201ENST00000334258 GNPATO15228 680 aa15.26■□□□□ 0.03
SYNE3-201ENST00000334258 PLEKP08567 350 aaPredicted RBP15.26■□□□□ 0.03
SYNE3-201ENST00000334258 ARID4AP29374 1257 aaPredicted RBP15.26■□□□□ 0.03
SYNE3-201ENST00000334258 UBA7P41226 1012 aa15.26■□□□□ 0.03
SYNE3-201ENST00000334258 IQCA1Q86XH1 822 aa15.26■□□□□ 0.03
SYNE3-201ENST00000334258 MMGT1Q8N4V1 131 aa15.26■□□□□ 0.03
SYNE3-201ENST00000334258 ENAHQ8N8S7 591 aaPredicted RBP15.26■□□□□ 0.03
SYNE3-201ENST00000334258 TNS2Q63HR2 1409 aa15.26■□□□□ 0.03
SYNE3-201ENST00000334258 SHANK3Q9BYB0 1731 aa15.26■□□□□ 0.03
SYNE3-201ENST00000334258 RIC1Q4ADV7 1423 aa15.25■□□□□ 0.03
SYNE3-201ENST00000334258 CYP7A1P22680 504 aa15.25■□□□□ 0.03
SYNE3-201ENST00000334258 PPP2R5BQ15173 497 aa15.25■□□□□ 0.03
SYNE3-201ENST00000334258 TTMPQ5BVD1 217 aa15.25■□□□□ 0.03
SYNE3-201ENST00000334258 ALS2CLQ60I27 953 aa15.25■□□□□ 0.03
SYNE3-201ENST00000334258 ZNF507Q8TCN5 953 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms