RNA–Protein interactions for RNA: ENST00000333235.3

CSPG4P4Y-201, Transcript of CSPG4 pseudogene 4 Y-linked, humanhuman

BASIC

Gene CSPG4P4Y, Length 3,724 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P4Y-201ENST00000333235 USP17L2Q6R6M4 530 aa13.09□□□□□ -0.31
CSPG4P4Y-201ENST00000333235 DAGLBQ8NCG7 672 aa13.09□□□□□ -0.31
CSPG4P4Y-201ENST00000333235 ARHGEF1Q92888 912 aaKnown RBP13.09□□□□□ -0.31
CSPG4P4Y-201ENST00000333235 TXKP42681 527 aa13.09□□□□□ -0.31
CSPG4P4Y-201ENST00000333235 TXNRD1Q16881 649 aa13.09□□□□□ -0.31
CSPG4P4Y-201ENST00000333235 GIMAP8Q8ND71 665 aaPredicted RBP13.09□□□□□ -0.31
CSPG4P4Y-201ENST00000333235 P2RX5Q93086 422 aa13.09□□□□□ -0.31
CSPG4P4Y-201ENST00000333235 DEF6Q9H4E7 631 aa13.09□□□□□ -0.31
CSPG4P4Y-201ENST00000333235 MYH14Q7Z406 1995 aaKnown RBP13.09□□□□□ -0.31
CSPG4P4Y-201ENST00000333235 CDK8P49336 464 aa13.09□□□□□ -0.31
CSPG4P4Y-201ENST00000333235 CCDC70Q6NSX1 233 aa13.09□□□□□ -0.31
CSPG4P4Y-201ENST00000333235 SV2BQ7L1I2 683 aa13.09□□□□□ -0.31
CSPG4P4Y-201ENST00000333235 KBTBD4Q9NVX7 518 aa13.09□□□□□ -0.31
CSPG4P4Y-201ENST00000333235 CACNA1SQ13698 1873 aa13.08□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 PALM3A6NDB9 673 aaPredicted RBP13.08□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 CYTH3O43739 400 aa13.08□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 IDEP14735 1019 aa13.08□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 RASA1P20936 1047 aa13.08□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 CCNE1P24864 410 aa13.08□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 NAALADL2Q58DX5 795 aa13.08□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 GPR101Q96P66 508 aaPredicted RBP13.08□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 SPZ1Q9BXG8 430 aa13.08□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 BIN2Q9UBW5 565 aaPredicted RBP13.08□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 FGFR1OPO95684 399 aaKnown RBP13.08□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 PPP4CP60510 307 aa13.08□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 TBCKQ8TEA7 893 aa13.08□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 CNOT6LQ96LI5 555 aaKnown RBP13.08□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 NFIXQ14938 502 aa13.08□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 RETREG2Q8NC44 543 aa13.08□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 CCDC102AQ96A19 550 aa13.08□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 JAKMIP2Q96AA8 810 aa13.08□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 CCDC42Q96M95 316 aa13.08□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 ZMYND12Q9H0C1 365 aa13.08□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 RNF216Q9NWF9 866 aaPredicted RBP13.08□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 LRWD1Q9UFC0 647 aa13.08□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 CAPN11Q9UMQ6 739 aa13.08□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 MCM3P25205 808 aa13.07□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 PMS1P54277 932 aaKnown RBP13.07□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 KIF5AQ12840 1032 aa13.07□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 MFSD14BQ5SR56 506 aa13.07□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 TXLNBQ8N3L3 684 aa13.07□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 GOLGA6L1Q8N7Z2 621 aa13.07□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 TRIM9Q9C026 710 aa13.07□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 ZCCHC17Q9NP64 241 aaKnown RBP13.07□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 GGA1Q9UJY5 639 aa13.07□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 SAR1BQ9Y6B6 198 aa13.07□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 A0A0U1RQG5 324 aaPredicted RBP13.07□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 C6orf229H3BNL8 230 aa13.07□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 RNF225M0QZC1 329 aaPredicted RBP13.07□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 SASH3O75995 380 aa13.07□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 UBA5Q9GZZ9 404 aa13.07□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 JADE2Q9NQC1 790 aa13.07□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 ENC1O14682 589 aa13.06□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 USO1O60763 962 aaKnown RBP13.06□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 FECHP22830 423 aa13.06□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 CALCRLQ16602 461 aa13.06□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 PIGSQ96S52 555 aa13.06□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 FUT8Q9BYC5 575 aa13.06□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 CKAP4Q07065 602 aaKnown RBP13.06□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 MAP9Q49MG5 647 aa13.06□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 KRT79Q5XKE5 535 aa13.06□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 IQCEQ6IPM2 695 aa13.06□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 IRF2BP1Q8IU81 584 aa13.06□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 NEDD1Q8NHV4 660 aa13.06□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 TANGO6Q9C0B7 1094 aa13.06□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 MKRN1Q9UHC7 482 aaKnown RBP13.06□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 TNNT3P45378 269 aaPredicted RBP13.06□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 ZBED6P86452 979 aa13.06□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 ATP2B2Q01814 1243 aa13.06□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 PICALMQ13492 652 aa13.06□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 NCAPH2Q6IBW4 605 aa13.06□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 TTI2Q6NXR4 508 aa13.06□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 CEP95Q96GE4 821 aa13.06□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 CAPZA3Q96KX2 299 aa13.06□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 CD209Q9NNX6 404 aa13.06□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 SLC39A2Q9NP94 309 aa13.06□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 PHLPP1O60346 1717 aa13.06□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 RAD21O60216 631 aa13.05□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 SRGNP10124 158 aa13.05□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 ST5P78524 1137 aa13.05□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 CCDC96Q2M329 555 aa13.05□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 DNAJC7Q99615 494 aa13.05□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 BMP2KQ9NSY1 1161 aaPredicted RBP13.05□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 CYP2C19P33261 490 aa13.05□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 TNNI2P48788 182 aa13.05□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 STK4Q13043 487 aa13.05□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 FAM182BQ5T319 152 aa13.05□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 HNRNPLLQ8WVV9 542 aaKnown RBP13.05□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 ZBTB9Q96C00 473 aa13.05□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 TSG101Q99816 390 aa13.05□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 LRRC27Q9C0I9 530 aa13.05□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 MMRN2Q9H8L6 949 aa13.05□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 TRIM10Q9UDY6 481 aa13.05□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 ROBO1Q9Y6N7 1651 aa13.05□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 MACROD2A1Z1Q3 448 aa13.05□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 KLRC4O43908 158 aa13.05□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 ABL1P00519 1130 aa13.05□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 SSBP05455 408 aaKnown RBP eCLIP13.05□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 ATP2B4P23634 1241 aa13.05□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 TM4SF1P30408 202 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms