RNA–Protein interactions for RNA: ENST00000332814.6

C11orf88-201, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS P4 TSL 5 BASIC

Gene C11orf88, Length 795 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-201ENST00000332814 DOCK3Q8IZD9 2030 aa19.02■□□□□ 0.64
C11orf88-201ENST00000332814 ZBTB5O15062 677 aa19.02■□□□□ 0.64
C11orf88-201ENST00000332814 CPA1P15085 419 aa19.02■□□□□ 0.64
C11orf88-201ENST00000332814 RXRAP19793 462 aa19.02■□□□□ 0.64
C11orf88-201ENST00000332814 RPS6KB1P23443 525 aa19.02■□□□□ 0.64
C11orf88-201ENST00000332814 Q6ZUG5 572 aa19.02■□□□□ 0.64
C11orf88-201ENST00000332814 RAB11FIP4Q86YS3 637 aa19.02■□□□□ 0.64
C11orf88-201ENST00000332814 MSL3Q8N5Y2 521 aaKnown RBP19.02■□□□□ 0.64
C11orf88-201ENST00000332814 TINF2Q9BSI4 451 aa19.02■□□□□ 0.64
C11orf88-201ENST00000332814 AMNQ9BXJ7 453 aa19.02■□□□□ 0.64
C11orf88-201ENST00000332814 PAK6Q9NQU5 681 aaPredicted RBP19.02■□□□□ 0.64
C11orf88-201ENST00000332814 SEC63Q9UGP8 760 aaKnown RBP19.02■□□□□ 0.64
C11orf88-201ENST00000332814 CNPY2Q9Y2B0 182 aa19.02■□□□□ 0.64
C11orf88-201ENST00000332814 MRPL11Q9Y3B7 192 aaKnown RBP19.02■□□□□ 0.64
C11orf88-201ENST00000332814 CYP46A1Q9Y6A2 500 aa19.02■□□□□ 0.64
C11orf88-201ENST00000332814 DNAJC25-GNG10A0A024R161 153 aa19.01■□□□□ 0.63
C11orf88-201ENST00000332814 KLF18A0A0U1RQI7 1052 aa19.01■□□□□ 0.63
C11orf88-201ENST00000332814 NFIBO00712 420 aa19.01■□□□□ 0.63
C11orf88-201ENST00000332814 ZBTB43O43298 467 aa19.01■□□□□ 0.63
C11orf88-201ENST00000332814 TFRCP02786 760 aaKnown RBP19.01■□□□□ 0.63
C11orf88-201ENST00000332814 CAPN2P17655 700 aa19.01■□□□□ 0.63
C11orf88-201ENST00000332814 EN2P19622 333 aaPredicted RBP19.01■□□□□ 0.63
C11orf88-201ENST00000332814 GJA8P48165 433 aa19.01■□□□□ 0.63
C11orf88-201ENST00000332814 APOA5Q6Q788 366 aa19.01■□□□□ 0.63
C11orf88-201ENST00000332814 RNF207Q6ZRF8 634 aa19.01■□□□□ 0.63
C11orf88-201ENST00000332814 ZNF467Q7Z7K2 595 aaPredicted RBP19.01■□□□□ 0.63
C11orf88-201ENST00000332814 MCF2L2Q86YR7 1114 aa19.01■□□□□ 0.63
C11orf88-201ENST00000332814 RRP36Q96EU6 259 aaKnown RBP19.01■□□□□ 0.63
C11orf88-201ENST00000332814 PIGSQ96S52 555 aa19.01■□□□□ 0.63
C11orf88-201ENST00000332814 RBM28Q9NW13 759 aaKnown RBP19.01■□□□□ 0.63
C11orf88-201ENST00000332814 GOLGA8AA7E2F4 631 aa19■□□□□ 0.63
C11orf88-201ENST00000332814 GOLGA8BA8MQT2 603 aa19■□□□□ 0.63
C11orf88-201ENST00000332814 MSCO60682 206 aa19■□□□□ 0.63
C11orf88-201ENST00000332814 SGPL1O95470 568 aa19■□□□□ 0.63
C11orf88-201ENST00000332814 CYBAP13498 195 aa19■□□□□ 0.63
C11orf88-201ENST00000332814 CALML3P27482 149 aa19■□□□□ 0.63
C11orf88-201ENST00000332814 CCND3P30281 292 aaPredicted RBP19■□□□□ 0.63
C11orf88-201ENST00000332814 FANCBQ8NB91 859 aa19■□□□□ 0.63
C11orf88-201ENST00000332814 PIBF1Q8WXW3 757 aa19■□□□□ 0.63
C11orf88-201ENST00000332814 BRF1Q92994 677 aa19■□□□□ 0.63
C11orf88-201ENST00000332814 MPHOSPH6Q99547 160 aaKnown RBP19■□□□□ 0.63
C11orf88-201ENST00000332814 RIOX1Q9H6W3 641 aa19■□□□□ 0.63
C11orf88-201ENST00000332814 CYP39A1Q9NYL5 469 aa19■□□□□ 0.63
C11orf88-201ENST00000332814 ADD3Q9UEY8 706 aaKnown RBP19■□□□□ 0.63
C11orf88-201ENST00000332814 NRBP1Q9UHY1 535 aa19■□□□□ 0.63
C11orf88-201ENST00000332814 RBBP6Q7Z6E9 1792 aaKnown RBP19■□□□□ 0.63
C11orf88-201ENST00000332814 SYNGAP1Q96PV0 1343 aa19■□□□□ 0.63
C11orf88-201ENST00000332814 ASB14A6NK59 587 aa18.99■□□□□ 0.63
C11orf88-201ENST00000332814 SMARCA1P28370 1054 aa18.99■□□□□ 0.63
C11orf88-201ENST00000332814 MLLT1Q03111 559 aaPredicted RBP18.99■□□□□ 0.63
C11orf88-201ENST00000332814 BAATQ14032 418 aaPredicted RBP18.99■□□□□ 0.63
C11orf88-201ENST00000332814 RTN1Q16799 776 aa18.99■□□□□ 0.63
C11orf88-201ENST00000332814 RUFY3Q7L099 469 aa18.99■□□□□ 0.63
C11orf88-201ENST00000332814 FAM133AQ8N9E0 248 aa18.99■□□□□ 0.63
C11orf88-201ENST00000332814 SPZ1Q9BXG8 430 aa18.99■□□□□ 0.63
C11orf88-201ENST00000332814 PNMA6FA0A0J9YX94 578 aa18.98■□□□□ 0.63
C11orf88-201ENST00000332814 PLEKHA8P1O95397 391 aa18.98■□□□□ 0.63
C11orf88-201ENST00000332814 RGS19P49795 217 aa18.98■□□□□ 0.63
C11orf88-201ENST00000332814 ANAPC15P60006 121 aa18.98■□□□□ 0.63
C11orf88-201ENST00000332814 CNTN2Q02246 1040 aa18.98■□□□□ 0.63
C11orf88-201ENST00000332814 CLEC4DQ8WXI8 215 aa18.98■□□□□ 0.63
C11orf88-201ENST00000332814 MTMR8Q96EF0 704 aa18.98■□□□□ 0.63
C11orf88-201ENST00000332814 TM6SF1Q9BZW5 370 aa18.98■□□□□ 0.63
C11orf88-201ENST00000332814 ZSWIM6Q9HCJ5 1215 aa18.98■□□□□ 0.63
C11orf88-201ENST00000332814 DDX20Q9UHI6 824 aaKnown RBP18.98■□□□□ 0.63
C11orf88-201ENST00000332814 ZHX1Q9UKY1 873 aaPredicted RBP18.98■□□□□ 0.63
C11orf88-201ENST00000332814 BRPF3Q9ULD4 1205 aa18.98■□□□□ 0.63
C11orf88-201ENST00000332814 PCDHA1Q9Y5I3 950 aa18.98■□□□□ 0.63
C11orf88-201ENST00000332814 CYTH3O43739 400 aa18.97■□□□□ 0.63
C11orf88-201ENST00000332814 METAP2P50579 478 aaKnown RBP eCLIP18.97■□□□□ 0.63
C11orf88-201ENST00000332814 RCAN1P53805 252 aa18.97■□□□□ 0.63
C11orf88-201ENST00000332814 APOBRQ0VD83 1088 aa18.97■□□□□ 0.63
C11orf88-201ENST00000332814 MAMDC4Q6UXC1 1216 aa18.97■□□□□ 0.63
C11orf88-201ENST00000332814 SLC30A10Q6XR72 485 aa18.97■□□□□ 0.63
C11orf88-201ENST00000332814 TMTC3Q6ZXV5 915 aa18.97■□□□□ 0.63
C11orf88-201ENST00000332814 ARMCX2Q7L311 632 aa18.97■□□□□ 0.63
C11orf88-201ENST00000332814 UPF3BQ9BZI7 483 aaKnown RBP18.97■□□□□ 0.63
C11orf88-201ENST00000332814 MAF1Q9H063 256 aa18.97■□□□□ 0.63
C11orf88-201ENST00000332814 GTF3C3Q9Y5Q9 886 aa18.97■□□□□ 0.63
C11orf88-201ENST00000332814 CCDC196A0A1B0GTZ2 297 aa18.96■□□□□ 0.63
C11orf88-201ENST00000332814 B4DLN1 442 aa18.96■□□□□ 0.63
C11orf88-201ENST00000332814 SEPT4O43236 478 aa18.96■□□□□ 0.63
C11orf88-201ENST00000332814 FARP2O94887 1054 aaPredicted RBP18.96■□□□□ 0.63
C11orf88-201ENST00000332814 MRPL12P52815 198 aaKnown RBP18.96■□□□□ 0.63
C11orf88-201ENST00000332814 RPS6P62753 249 aaKnown RBP18.96■□□□□ 0.63
C11orf88-201ENST00000332814 PRAMEF19Q5SWL8 479 aa18.96■□□□□ 0.63
C11orf88-201ENST00000332814 PPP4R3CPQ6ZMV5 832 aa18.96■□□□□ 0.63
C11orf88-201ENST00000332814 CMTR1Q8N1G2 835 aaKnown RBP18.96■□□□□ 0.63
C11orf88-201ENST00000332814 CCDC82Q8N4S0 544 aa18.96■□□□□ 0.63
C11orf88-201ENST00000332814 RGS22Q8NE09 1264 aa18.96■□□□□ 0.63
C11orf88-201ENST00000332814 SHISA4Q96DD7 197 aa18.96■□□□□ 0.63
C11orf88-201ENST00000332814 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.96■□□□□ 0.63
C11orf88-201ENST00000332814 PLXNA1Q9UIW2 1896 aa18.95■□□□□ 0.62
C11orf88-201ENST00000332814 SOWAHBA6NEL2 793 aa18.95■□□□□ 0.62
C11orf88-201ENST00000332814 CFBP00751 764 aa18.95■□□□□ 0.62
C11orf88-201ENST00000332814 IGHA2P01877 340 aa18.95■□□□□ 0.62
C11orf88-201ENST00000332814 AKR1A1P14550 325 aa18.95■□□□□ 0.62
C11orf88-201ENST00000332814 PPP2R5BQ15173 497 aa18.95■□□□□ 0.62
C11orf88-201ENST00000332814 FBXL16Q8N461 479 aa18.95■□□□□ 0.62
C11orf88-201ENST00000332814 SRBD1Q8N5C6 995 aaKnown RBP18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms