RNA–Protein interactions for RNA: ENST00000330943.8

SNX20-202, Transcript of sorting nexin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX20, Length 2,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-202ENST00000330943 ARL8AQ96BM9 186 aa16.11■□□□□ 0.17
SNX20-202ENST00000330943 CCDC42Q96M95 316 aa16.11■□□□□ 0.17
SNX20-202ENST00000330943 MLXIPQ9HAP2 919 aa16.11■□□□□ 0.17
SNX20-202ENST00000330943 TACC1O75410 805 aa16.1■□□□□ 0.17
SNX20-202ENST00000330943 STARD3NLO95772 234 aa16.1■□□□□ 0.17
SNX20-202ENST00000330943 CXCR5P32302 372 aa16.1■□□□□ 0.17
SNX20-202ENST00000330943 TTI2Q6NXR4 508 aa16.1■□□□□ 0.17
SNX20-202ENST00000330943 MYCBPQ99417 103 aaPredicted RBP16.1■□□□□ 0.17
SNX20-202ENST00000330943 SH3GL2Q99962 352 aa16.1■□□□□ 0.17
SNX20-202ENST00000330943 NUP58Q9BVL2 599 aa16.1■□□□□ 0.17
SNX20-202ENST00000330943 TSGA10Q9BZW7 698 aa16.1■□□□□ 0.17
SNX20-202ENST00000330943 EHD2Q9NZN4 543 aa16.1■□□□□ 0.17
SNX20-202ENST00000330943 ABCF2Q9UG63 623 aa16.1■□□□□ 0.17
SNX20-202ENST00000330943 LOC102724159A0A0B4J2E5 919 aa16.1■□□□□ 0.17
SNX20-202ENST00000330943 SCG2P13521 617 aa16.1■□□□□ 0.17
SNX20-202ENST00000330943 PDCLQ13371 301 aa16.1■□□□□ 0.17
SNX20-202ENST00000330943 PWP2Q15269 919 aaKnown RBP16.1■□□□□ 0.17
SNX20-202ENST00000330943 NAALADL2Q58DX5 795 aa16.1■□□□□ 0.17
SNX20-202ENST00000330943 TTMPQ5BVD1 217 aa16.1■□□□□ 0.17
SNX20-202ENST00000330943 GPATCH11Q8N954 259 aa16.1■□□□□ 0.17
SNX20-202ENST00000330943 MOCS3O95396 460 aa16.09■□□□□ 0.17
SNX20-202ENST00000330943 CALM1P0DP23 149 aa16.09■□□□□ 0.17
SNX20-202ENST00000330943 CALM2P0DP24 149 aa16.09■□□□□ 0.17
SNX20-202ENST00000330943 CALM3P0DP25 149 aa16.09■□□□□ 0.17
SNX20-202ENST00000330943 HNRNPH1P31943 449 aaKnown RBP16.09■□□□□ 0.17
SNX20-202ENST00000330943 MTIF2P46199 727 aaKnown RBP16.09■□□□□ 0.17
SNX20-202ENST00000330943 MNAT1P51948 309 aa16.09■□□□□ 0.17
SNX20-202ENST00000330943 EPHB4P54760 987 aa16.09■□□□□ 0.17
SNX20-202ENST00000330943 NFRKBQ6P4R8 1299 aa16.09■□□□□ 0.17
SNX20-202ENST00000330943 GPIHBP1Q8IV16 184 aa16.09■□□□□ 0.17
SNX20-202ENST00000330943 CNOT6LQ96LI5 555 aaKnown RBP16.09■□□□□ 0.17
SNX20-202ENST00000330943 IFIH1Q9BYX4 1025 aaKnown RBP16.09■□□□□ 0.17
SNX20-202ENST00000330943 ANAPC4Q9UJX5 808 aa16.09■□□□□ 0.17
SNX20-202ENST00000330943 ARAP2Q8WZ64 1704 aa16.09■□□□□ 0.17
SNX20-202ENST00000330943 MAGEB6P1A0A0J9YX57 407 aa16.09■□□□□ 0.17
SNX20-202ENST00000330943 NDUFAB1O14561 156 aa16.09■□□□□ 0.17
SNX20-202ENST00000330943 KLRC4O43908 158 aa16.09■□□□□ 0.17
SNX20-202ENST00000330943 USO1O60763 962 aaKnown RBP16.09■□□□□ 0.17
SNX20-202ENST00000330943 HSF2BPO75031 334 aa16.09■□□□□ 0.17
SNX20-202ENST00000330943 CCDC181Q5TID7 509 aa16.09■□□□□ 0.17
SNX20-202ENST00000330943 ARL6IP4Q66PJ3 421 aaKnown RBP16.09■□□□□ 0.17
SNX20-202ENST00000330943 POTEDQ86YR6 584 aa16.09■□□□□ 0.17
SNX20-202ENST00000330943 RETREG2Q8NC44 543 aa16.09■□□□□ 0.17
SNX20-202ENST00000330943 DUSP9Q99956 384 aaKnown RBP16.09■□□□□ 0.17
SNX20-202ENST00000330943 KCNB1Q14721 858 aa16.08■□□□□ 0.17
SNX20-202ENST00000330943 TYW1BQ6NUM6 668 aa16.08■□□□□ 0.17
SNX20-202ENST00000330943 KCNV1Q6PIU1 500 aa16.08■□□□□ 0.17
SNX20-202ENST00000330943 SH2D3CQ8N5H7 860 aa16.08■□□□□ 0.17
SNX20-202ENST00000330943 OSBPL9Q96SU4 736 aa16.08■□□□□ 0.17
SNX20-202ENST00000330943 POLD4Q9HCU8 107 aa16.08■□□□□ 0.17
SNX20-202ENST00000330943 ATP1A2P50993 1020 aa16.08■□□□□ 0.16
SNX20-202ENST00000330943 KCTD16Q68DU8 428 aa16.08■□□□□ 0.16
SNX20-202ENST00000330943 GIMAP8Q8ND71 665 aaPredicted RBP16.08■□□□□ 0.16
SNX20-202ENST00000330943 RASGRP4Q8TDF6 673 aa16.08■□□□□ 0.16
SNX20-202ENST00000330943 CEP89Q96ST8 783 aa16.08■□□□□ 0.16
SNX20-202ENST00000330943 NOC4LQ9BVI4 516 aaKnown RBP16.08■□□□□ 0.16
SNX20-202ENST00000330943 SH2D4AQ9H788 454 aa16.08■□□□□ 0.16
SNX20-202ENST00000330943 STIM2Q9P246 746 aa16.08■□□□□ 0.16
SNX20-202ENST00000330943 PLCH1Q4KWH8 1693 aa16.08■□□□□ 0.16
SNX20-202ENST00000330943 DUOX1Q9NRD9 1551 aa16.08■□□□□ 0.16
SNX20-202ENST00000330943 NMT2O60551 498 aa16.08■□□□□ 0.16
SNX20-202ENST00000330943 DDAH1O94760 285 aa16.08■□□□□ 0.16
SNX20-202ENST00000330943 RHOBTB3O94955 611 aa16.08■□□□□ 0.16
SNX20-202ENST00000330943 SWT1Q5T5J6 900 aaKnown RBP16.08■□□□□ 0.16
SNX20-202ENST00000330943 HAUS3Q68CZ6 603 aa16.08■□□□□ 0.16
SNX20-202ENST00000330943 C4orf32Q8N8J7 132 aa16.08■□□□□ 0.16
SNX20-202ENST00000330943 SLC4A9Q96Q91 983 aa16.08■□□□□ 0.16
SNX20-202ENST00000330943 COL5A2P05997 1499 aaPredicted RBP16.07■□□□□ 0.16
SNX20-202ENST00000330943 UBA7P41226 1012 aa16.07■□□□□ 0.16
SNX20-202ENST00000330943 EMBQ6PCB8 327 aa16.07■□□□□ 0.16
SNX20-202ENST00000330943 DTHD1Q6ZMT9 781 aa16.07■□□□□ 0.16
SNX20-202ENST00000330943 NOC3LQ8WTT2 800 aaKnown RBP16.07■□□□□ 0.16
SNX20-202ENST00000330943 FAM205AQ6ZU69 1335 aa16.07■□□□□ 0.16
SNX20-202ENST00000330943 ALS2CLQ60I27 953 aa16.07■□□□□ 0.16
SNX20-202ENST00000330943 CCDC91Q7Z6B0 441 aa16.07■□□□□ 0.16
SNX20-202ENST00000330943 C2CD5Q86YS7 1000 aa16.07■□□□□ 0.16
SNX20-202ENST00000330943 RUBCNQ92622 972 aa16.07■□□□□ 0.16
SNX20-202ENST00000330943 CARD10Q9BWT7 1032 aa16.07■□□□□ 0.16
SNX20-202ENST00000330943 ZBTB1Q9Y2K1 713 aa16.07■□□□□ 0.16
SNX20-202ENST00000330943 HYOU1Q9Y4L1 999 aa16.07■□□□□ 0.16
SNX20-202ENST00000330943 PCDHA13Q9Y5I0 950 aa16.07■□□□□ 0.16
SNX20-202ENST00000330943 CAPN7Q9Y6W3 813 aa16.07■□□□□ 0.16
SNX20-202ENST00000330943 MYH10P35580 1976 aa16.07■□□□□ 0.16
SNX20-202ENST00000330943 BAZ2AQ9UIF9 1905 aaKnown RBP16.06■□□□□ 0.16
SNX20-202ENST00000330943 NKRFO15226 690 aaKnown RBP eCLIP16.06■□□□□ 0.16
SNX20-202ENST00000330943 NCK2O43639 380 aa16.06■□□□□ 0.16
SNX20-202ENST00000330943 ZEB2O60315 1214 aa16.06■□□□□ 0.16
SNX20-202ENST00000330943 KRT14P02533 472 aa16.06■□□□□ 0.16
SNX20-202ENST00000330943 EPB41P11171 864 aaKnown RBP16.06■□□□□ 0.16
SNX20-202ENST00000330943 DYNLL1P63167 89 aaKnown RBP16.06■□□□□ 0.16
SNX20-202ENST00000330943 SKOR1P84550 965 aa16.06■□□□□ 0.16
SNX20-202ENST00000330943 ITIH3Q06033 890 aa16.06■□□□□ 0.16
SNX20-202ENST00000330943 ANKRD40Q6AI12 368 aa16.06■□□□□ 0.16
SNX20-202ENST00000330943 C8orf74Q6P047 294 aa16.06■□□□□ 0.16
SNX20-202ENST00000330943 ZNF572Q7Z3I7 529 aaPredicted RBP16.06■□□□□ 0.16
SNX20-202ENST00000330943 ZIM3Q96PE6 472 aa16.06■□□□□ 0.16
SNX20-202ENST00000330943 TCP1P17987 556 aaKnown RBP16.06■□□□□ 0.16
SNX20-202ENST00000330943 PFKFB3Q16875 520 aaPredicted RBP16.06■□□□□ 0.16
SNX20-202ENST00000330943 CCDC178Q5BJE1 867 aa16.06■□□□□ 0.16
SNX20-202ENST00000330943 GPKOWQ92917 476 aaPredicted RBP eCLIP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms