RNA–Protein interactions for RNA: ENST00000324106.8

CD28-201, Transcript of CD28 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD28, Length 4,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-201ENST00000324106 PLEKHF1Q96S99 279 aa9.87□□□□□ -0.83
CD28-201ENST00000324106 ADD1P35611 737 aaKnown RBP9.87□□□□□ -0.83
CD28-201ENST00000324106 MAGEA1P43355 309 aa9.87□□□□□ -0.83
CD28-201ENST00000324106 LACTBP83111 547 aaPredicted RBP9.87□□□□□ -0.83
CD28-201ENST00000324106 RSRC2Q7L4I2 434 aaKnown RBP9.87□□□□□ -0.83
CD28-201ENST00000324106 SMC1BQ8NDV3 1235 aa9.87□□□□□ -0.83
CD28-201ENST00000324106 POMGNT1Q8WZA1 660 aa9.87□□□□□ -0.83
CD28-201ENST00000324106 PRIMPOLQ96LW4 560 aa9.87□□□□□ -0.83
CD28-201ENST00000324106 CEP63Q96MT8 703 aa9.87□□□□□ -0.83
CD28-201ENST00000324106 KIF1BO60333 1816 aa9.87□□□□□ -0.83
CD28-201ENST00000324106 USP17L10C9JJH3 530 aa9.87□□□□□ -0.83
CD28-201ENST00000324106 KRT10P13645 584 aa9.87□□□□□ -0.83
CD28-201ENST00000324106 SARNPP82979 210 aaKnown RBP9.87□□□□□ -0.83
CD28-201ENST00000324106 R3HDM1Q15032 1099 aaKnown RBP9.87□□□□□ -0.83
CD28-201ENST00000324106 SFMBT2Q5VUG0 894 aa9.87□□□□□ -0.83
CD28-201ENST00000324106 TRIML1Q8N9V2 468 aa9.87□□□□□ -0.83
CD28-201ENST00000324106 DCAF4Q8WV16 495 aa9.87□□□□□ -0.83
CD28-201ENST00000324106 CLSTN2Q9H4D0 955 aa9.87□□□□□ -0.83
CD28-201ENST00000324106 TSKSQ9UJT2 592 aa9.87□□□□□ -0.83
CD28-201ENST00000324106 ZNRF3Q9ULT6 936 aa9.87□□□□□ -0.83
CD28-201ENST00000324106 NFE2L3Q9Y4A8 694 aa9.87□□□□□ -0.83
CD28-201ENST00000324106 ZHX2Q9Y6X8 837 aa9.87□□□□□ -0.83
CD28-201ENST00000324106 GMNNO75496 209 aa9.86□□□□□ -0.83
CD28-201ENST00000324106 CYP19A1P11511 503 aaPredicted RBP9.86□□□□□ -0.83
CD28-201ENST00000324106 DIXDC1Q155Q3 683 aa9.86□□□□□ -0.83
CD28-201ENST00000324106 MUM1L1Q5H9M0 696 aa9.86□□□□□ -0.83
CD28-201ENST00000324106 ADALQ6DHV7 355 aa9.86□□□□□ -0.83
CD28-201ENST00000324106 GBP6Q6ZN66 633 aa9.86□□□□□ -0.83
CD28-201ENST00000324106 TRIM50Q86XT4 487 aa9.86□□□□□ -0.83
CD28-201ENST00000324106 RDH13Q8NBN7 331 aa9.86□□□□□ -0.83
CD28-201ENST00000324106 NELFBQ8WX92 580 aa9.86□□□□□ -0.83
CD28-201ENST00000324106 ANKRD36BP1Q96IX9 119 aa9.86□□□□□ -0.83
CD28-201ENST00000324106 CEP170P1Q96L14 293 aa9.86□□□□□ -0.83
CD28-201ENST00000324106 PARP2Q9UGN5 583 aa9.86□□□□□ -0.83
CD28-201ENST00000324106 CRCPO75575 148 aa9.86□□□□□ -0.83
CD28-201ENST00000324106 VIMP08670 466 aaKnown RBP9.86□□□□□ -0.83
CD28-201ENST00000324106 MECOMQ03112 1051 aa9.86□□□□□ -0.83
CD28-201ENST00000324106 CUL4BQ13620 913 aa9.86□□□□□ -0.83
CD28-201ENST00000324106 CFAP157Q5JU67 520 aa9.86□□□□□ -0.83
CD28-201ENST00000324106 PDXDC2PQ6P474 469 aa9.86□□□□□ -0.83
CD28-201ENST00000324106 CRAMP1Q96RY5 1269 aa9.86□□□□□ -0.83
CD28-201ENST00000324106 HERC5Q9UII4 1024 aaKnown RBP9.86□□□□□ -0.83
CD28-201ENST00000324106 NLRP12P59046 1061 aa9.86□□□□□ -0.83
CD28-201ENST00000324106 MKRN3Q13064 507 aaKnown RBP9.86□□□□□ -0.83
CD28-201ENST00000324106 ZNF569Q5MCW4 686 aa9.86□□□□□ -0.83
CD28-201ENST00000324106 PPP2R3CQ969Q6 453 aa9.86□□□□□ -0.83
CD28-201ENST00000324106 PAIP2Q9BPZ3 127 aaKnown RBP9.86□□□□□ -0.83
CD28-201ENST00000324106 TRIM7Q9C029 511 aa9.86□□□□□ -0.83
CD28-201ENST00000324106 PANK4Q9NVE7 773 aa9.86□□□□□ -0.83
CD28-201ENST00000324106 SLC12A6Q9UHW9 1150 aa9.86□□□□□ -0.83
CD28-201ENST00000324106 PSDA5PKW4 1024 aaPredicted RBP9.86□□□□□ -0.83
CD28-201ENST00000324106 SASH1O94885 1247 aa9.86□□□□□ -0.83
CD28-201ENST00000324106 XPAP23025 273 aaPredicted RBP9.86□□□□□ -0.83
CD28-201ENST00000324106 DYNLL1P63167 89 aaKnown RBP9.86□□□□□ -0.83
CD28-201ENST00000324106 TRIM28Q13263 835 aaKnown RBP9.86□□□□□ -0.83
CD28-201ENST00000324106 GEN1Q17RS7 908 aa9.86□□□□□ -0.83
CD28-201ENST00000324106 USP17L2Q6R6M4 530 aa9.86□□□□□ -0.83
CD28-201ENST00000324106 KCTD1Q719H9 257 aa9.86□□□□□ -0.83
CD28-201ENST00000324106 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.86□□□□□ -0.83
CD28-201ENST00000324106 CCDC25Q86WR0 208 aa9.86□□□□□ -0.83
CD28-201ENST00000324106 GPKOWQ92917 476 aaPredicted RBP eCLIP9.86□□□□□ -0.83
CD28-201ENST00000324106 PCDHA4Q9UN74 947 aa9.86□□□□□ -0.83
CD28-201ENST00000324106 GTPBP6O43824 516 aaPredicted RBP9.85□□□□□ -0.83
CD28-201ENST00000324106 RNF8O76064 485 aa9.85□□□□□ -0.83
CD28-201ENST00000324106 GH2P01242 217 aa9.85□□□□□ -0.83
CD28-201ENST00000324106 PTPN12Q05209 780 aaKnown RBP9.85□□□□□ -0.83
CD28-201ENST00000324106 PPP1R21Q6ZMI0 780 aa9.85□□□□□ -0.83
CD28-201ENST00000324106 RNF207Q6ZRF8 634 aa9.85□□□□□ -0.83
CD28-201ENST00000324106 SESTD1Q86VW0 696 aa9.85□□□□□ -0.83
CD28-201ENST00000324106 RBM46Q8TBY0 533 aaKnown RBP9.85□□□□□ -0.83
CD28-201ENST00000324106 GPBP1L1Q9HC44 474 aaPredicted RBP9.85□□□□□ -0.83
CD28-201ENST00000324106 ZSWIM6Q9HCJ5 1215 aa9.85□□□□□ -0.83
CD28-201ENST00000324106 MINPP1Q9UNW1 487 aa9.85□□□□□ -0.83
CD28-201ENST00000324106 GOLGA8CPA6NN73 597 aa9.85□□□□□ -0.83
CD28-201ENST00000324106 CDK8P49336 464 aa9.85□□□□□ -0.83
CD28-201ENST00000324106 MXRA7P84157 204 aa9.85□□□□□ -0.83
CD28-201ENST00000324106 ALCAMQ13740 583 aa9.85□□□□□ -0.83
CD28-201ENST00000324106 STXBP2Q15833 593 aa9.85□□□□□ -0.83
CD28-201ENST00000324106 APOA5Q6Q788 366 aa9.85□□□□□ -0.83
CD28-201ENST00000324106 BARGINQ6ZT62 677 aa9.85□□□□□ -0.83
CD28-201ENST00000324106 TCP11Q8WWU5 503 aa9.85□□□□□ -0.83
CD28-201ENST00000324106 PRPF31Q8WWY3 499 aaKnown RBP9.85□□□□□ -0.83
CD28-201ENST00000324106 SEC62Q99442 399 aaKnown RBP9.85□□□□□ -0.83
CD28-201ENST00000324106 FOXP1Q9H334 677 aaPredicted RBP9.85□□□□□ -0.83
CD28-201ENST00000324106 TMEM206Q9H813 350 aa9.85□□□□□ -0.83
CD28-201ENST00000324106 FEM1BQ9UK73 627 aa9.85□□□□□ -0.83
CD28-201ENST00000324106 NFKBIAP25963 317 aa9.85□□□□□ -0.83
CD28-201ENST00000324106 SLC12A2P55011 1212 aa9.85□□□□□ -0.83
CD28-201ENST00000324106 RBM10P98175 930 aaKnown RBP9.85□□□□□ -0.83
CD28-201ENST00000324106 CYP4A11Q02928 519 aa9.85□□□□□ -0.83
CD28-201ENST00000324106 ITIH3Q06033 890 aa9.85□□□□□ -0.83
CD28-201ENST00000324106 AP3B2Q13367 1082 aa9.85□□□□□ -0.83
CD28-201ENST00000324106 RASGRF1Q13972 1273 aa9.85□□□□□ -0.83
CD28-201ENST00000324106 NFIXQ14938 502 aa9.85□□□□□ -0.83
CD28-201ENST00000324106 GTF3C2Q8WUA4 911 aaPredicted RBP9.85□□□□□ -0.83
CD28-201ENST00000324106 MAP4K1Q92918 833 aa9.85□□□□□ -0.83
CD28-201ENST00000324106 SLF1Q9BQI6 1058 aa9.85□□□□□ -0.83
CD28-201ENST00000324106 APOL6Q9BWW8 343 aa9.85□□□□□ -0.83
CD28-201ENST00000324106 LZTFL1Q9NQ48 299 aa9.85□□□□□ -0.83
CD28-201ENST00000324106 ANKFY1Q9P2R3 1169 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms