RNA–Protein interactions for RNA: ENST00000319518.12

CPNE7-202, Transcript of copine 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE7, Length 2,409 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-202ENST00000319518 MYO6Q9UM54 1294 aa23.28■■□□□ 1.32
CPNE7-202ENST00000319518 MTMR7Q9Y216 660 aa23.28■■□□□ 1.32
CPNE7-202ENST00000319518 LGALS16A8MUM7 142 aa23.28■■□□□ 1.32
CPNE7-202ENST00000319518 BAG3O95817 575 aa23.28■■□□□ 1.32
CPNE7-202ENST00000319518 HOXA10P31260 410 aaPredicted RBP23.28■■□□□ 1.32
CPNE7-202ENST00000319518 GSTO1P78417 241 aa23.28■■□□□ 1.32
CPNE7-202ENST00000319518 MFSD14BQ5SR56 506 aa23.28■■□□□ 1.32
CPNE7-202ENST00000319518 TXLNBQ8N3L3 684 aa23.28■■□□□ 1.32
CPNE7-202ENST00000319518 DNAJC7Q99615 494 aa23.28■■□□□ 1.32
CPNE7-202ENST00000319518 GUCA1BQ9UMX6 200 aa23.28■■□□□ 1.32
CPNE7-202ENST00000319518 IL1R1P14778 569 aa23.27■■□□□ 1.32
CPNE7-202ENST00000319518 CALML3P27482 149 aa23.27■■□□□ 1.32
CPNE7-202ENST00000319518 HERVK_113P62684 666 aa23.27■■□□□ 1.32
CPNE7-202ENST00000319518 HDXQ7Z353 690 aa23.27■■□□□ 1.32
CPNE7-202ENST00000319518 PLIN2Q99541 437 aa23.27■■□□□ 1.32
CPNE7-202ENST00000319518 COL23A1Q86Y22 540 aaPredicted RBP23.27■■□□□ 1.31
CPNE7-202ENST00000319518 MKNK2Q9HBH9 465 aa23.27■■□□□ 1.31
CPNE7-202ENST00000319518 TRAPPC11Q7Z392 1133 aa23.26■■□□□ 1.31
CPNE7-202ENST00000319518 OR8K1Q8NGG5 319 aa23.26■■□□□ 1.31
CPNE7-202ENST00000319518 HDAC6Q9UBN7 1215 aa23.26■■□□□ 1.31
CPNE7-202ENST00000319518 TULP2O00295 520 aa23.25■■□□□ 1.31
CPNE7-202ENST00000319518 ENC1O14682 589 aa23.25■■□□□ 1.31
CPNE7-202ENST00000319518 KIF5BP33176 963 aa23.25■■□□□ 1.31
CPNE7-202ENST00000319518 PPP4CP60510 307 aa23.25■■□□□ 1.31
CPNE7-202ENST00000319518 EXOC4Q96A65 974 aa23.25■■□□□ 1.31
CPNE7-202ENST00000319518 PCDHA6Q9UN73 950 aa23.25■■□□□ 1.31
CPNE7-202ENST00000319518 PCDHA8Q9Y5H6 950 aa23.25■■□□□ 1.31
CPNE7-202ENST00000319518 RASSF10A6NK89 507 aa23.25■■□□□ 1.31
CPNE7-202ENST00000319518 PPEF1O14829 653 aaPredicted RBP23.25■■□□□ 1.31
CPNE7-202ENST00000319518 CYTH3O43739 400 aa23.25■■□□□ 1.31
CPNE7-202ENST00000319518 IRX5P78411 483 aaPredicted RBP23.25■■□□□ 1.31
CPNE7-202ENST00000319518 KCNB1Q14721 858 aa23.25■■□□□ 1.31
CPNE7-202ENST00000319518 TTI2Q6NXR4 508 aa23.25■■□□□ 1.31
CPNE7-202ENST00000319518 PNMA1Q8ND90 353 aa23.25■■□□□ 1.31
CPNE7-202ENST00000319518 CRAMP1Q96RY5 1269 aa23.25■■□□□ 1.31
CPNE7-202ENST00000319518 SH3GLB2Q9NR46 395 aa23.25■■□□□ 1.31
CPNE7-202ENST00000319518 KBTBD4Q9NVX7 518 aa23.25■■□□□ 1.31
CPNE7-202ENST00000319518 MAD2L2Q9UI95 211 aa23.25■■□□□ 1.31
CPNE7-202ENST00000319518 A0A1W2PQC6 194 aa23.24■■□□□ 1.31
CPNE7-202ENST00000319518 INF2Q27J81 1249 aa23.24■■□□□ 1.31
CPNE7-202ENST00000319518 DTHD1Q6ZMT9 781 aa23.24■■□□□ 1.31
CPNE7-202ENST00000319518 MSL3Q8N5Y2 521 aaKnown RBP23.24■■□□□ 1.31
CPNE7-202ENST00000319518 EEF2KMTQ96G04 330 aa23.24■■□□□ 1.31
CPNE7-202ENST00000319518 KAT14Q9H8E8 782 aa23.24■■□□□ 1.31
CPNE7-202ENST00000319518 PODXL2Q9NZ53 605 aa23.24■■□□□ 1.31
CPNE7-202ENST00000319518 CAPN11Q9UMQ6 739 aa23.24■■□□□ 1.31
CPNE7-202ENST00000319518 PSMD14O00487 310 aa23.24■■□□□ 1.31
CPNE7-202ENST00000319518 RHOBTB3O94955 611 aa23.24■■□□□ 1.31
CPNE7-202ENST00000319518 GTF2IP78347 998 aa23.24■■□□□ 1.31
CPNE7-202ENST00000319518 PSD3Q9NYI0 1048 aa23.24■■□□□ 1.31
CPNE7-202ENST00000319518 LUC7L2Q9Y383 392 aaKnown RBP23.24■■□□□ 1.31
CPNE7-202ENST00000319518 LDHCP07864 332 aa23.23■■□□□ 1.31
CPNE7-202ENST00000319518 TUBB4BP68371 445 aa23.23■■□□□ 1.31
CPNE7-202ENST00000319518 MUM1L1Q5H9M0 696 aa23.23■■□□□ 1.31
CPNE7-202ENST00000319518 TEX11Q8IYF3 940 aa23.23■■□□□ 1.31
CPNE7-202ENST00000319518 GIMAP8Q8ND71 665 aaPredicted RBP23.23■■□□□ 1.31
CPNE7-202ENST00000319518 DUSP9Q99956 384 aaKnown RBP23.23■■□□□ 1.31
CPNE7-202ENST00000319518 TTYH3Q9C0H2 523 aa23.23■■□□□ 1.31
CPNE7-202ENST00000319518 AGPAT5Q9NUQ2 364 aa23.23■■□□□ 1.31
CPNE7-202ENST00000319518 KLRG2A4D1S0 409 aaPredicted RBP23.23■■□□□ 1.31
CPNE7-202ENST00000319518 F8W031 263 aaPredicted RBP23.23■■□□□ 1.31
CPNE7-202ENST00000319518 NKRFO15226 690 aaKnown RBP eCLIP23.23■■□□□ 1.31
CPNE7-202ENST00000319518 ERLIN1O75477 346 aa23.23■■□□□ 1.31
CPNE7-202ENST00000319518 APBA3O96018 575 aa23.23■■□□□ 1.31
CPNE7-202ENST00000319518 ATP1A1P05023 1023 aaKnown RBP23.23■■□□□ 1.31
CPNE7-202ENST00000319518 CAPN2P17655 700 aa23.23■■□□□ 1.31
CPNE7-202ENST00000319518 KLK7P49862 253 aa23.23■■□□□ 1.31
CPNE7-202ENST00000319518 CASP8Q14790 479 aa23.23■■□□□ 1.31
CPNE7-202ENST00000319518 MSL1Q68DK7 614 aa23.23■■□□□ 1.31
CPNE7-202ENST00000319518 TMED8Q6PL24 325 aaPredicted RBP23.23■■□□□ 1.31
CPNE7-202ENST00000319518 MXD3Q9BW11 206 aa23.23■■□□□ 1.31
CPNE7-202ENST00000319518 THAP9Q9H5L6 903 aa23.23■■□□□ 1.31
CPNE7-202ENST00000319518 VPS18Q9P253 973 aa23.23■■□□□ 1.31
CPNE7-202ENST00000319518 RCCD1A6NED2 376 aa23.22■■□□□ 1.31
CPNE7-202ENST00000319518 B4DLN1 442 aa23.22■■□□□ 1.31
CPNE7-202ENST00000319518 EEF1GP26641 437 aaKnown RBP23.22■■□□□ 1.31
CPNE7-202ENST00000319518 GPS2Q13227 327 aa23.22■■□□□ 1.31
CPNE7-202ENST00000319518 ANKRD31Q8N7Z5 1873 aa23.22■■□□□ 1.31
CPNE7-202ENST00000319518 NAV1Q8NEY1 1877 aa23.22■■□□□ 1.31
CPNE7-202ENST00000319518 CCDC194A0A1B0GVG4 234 aa23.22■■□□□ 1.31
CPNE7-202ENST00000319518 LRRIQ3A6PVS8 624 aaPredicted RBP23.22■■□□□ 1.31
CPNE7-202ENST00000319518 PES1O00541 588 aaKnown RBP23.22■■□□□ 1.31
CPNE7-202ENST00000319518 SRGAP2O75044 1071 aa23.22■■□□□ 1.31
CPNE7-202ENST00000319518 TSPY3P0CV98 308 aa23.22■■□□□ 1.31
CPNE7-202ENST00000319518 TSPY8P0CW00 308 aa23.22■■□□□ 1.31
CPNE7-202ENST00000319518 LMAN1P49257 510 aa23.22■■□□□ 1.31
CPNE7-202ENST00000319518 GRM4Q14833 912 aa23.22■■□□□ 1.31
CPNE7-202ENST00000319518 MEA1Q16626 185 aa23.22■■□□□ 1.31
CPNE7-202ENST00000319518 DGKHQ86XP1 1220 aa23.22■■□□□ 1.31
CPNE7-202ENST00000319518 TRIM47Q96LD4 638 aa23.22■■□□□ 1.31
CPNE7-202ENST00000319518 TRERF1Q96PN7 1200 aa23.22■■□□□ 1.31
CPNE7-202ENST00000319518 CCSER1Q9C0I3 900 aa23.22■■□□□ 1.31
CPNE7-202ENST00000319518 HAUS4Q9H6D7 363 aa23.22■■□□□ 1.31
CPNE7-202ENST00000319518 FLT1P17948 1338 aa23.22■■□□□ 1.31
CPNE7-202ENST00000319518 GPR75-ASB3A0A0A6YYF3 556 aa23.21■■□□□ 1.31
CPNE7-202ENST00000319518 ZSCAN26Q16670 478 aa23.21■■□□□ 1.31
CPNE7-202ENST00000319518 STXBP3O00186 592 aa23.21■■□□□ 1.31
CPNE7-202ENST00000319518 SRGNP10124 158 aa23.21■■□□□ 1.31
CPNE7-202ENST00000319518 RASA1P20936 1047 aa23.21■■□□□ 1.31
CPNE7-202ENST00000319518 RHBDL3P58872 404 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms