RNA–Protein interactions for RNA: ENST00000316341.7

SLC12A4-201, Transcript of solute carrier family 12 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC12A4, Length 4,765 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A4-201ENST00000316341 TPTE2Q6XPS3 522 aa20.15■□□□□ 0.82
SLC12A4-201ENST00000316341 TADA2BQ86TJ2 420 aa20.15■□□□□ 0.82
SLC12A4-201ENST00000316341 ANKRD42Q8N9B4 389 aa20.15■□□□□ 0.82
SLC12A4-201ENST00000316341 KAZALD1Q96I82 304 aa20.15■□□□□ 0.82
SLC12A4-201ENST00000316341 SERPINA10Q9UK55 444 aa20.15■□□□□ 0.82
SLC12A4-201ENST00000316341 MTUS1Q9ULD2 1270 aa20.15■□□□□ 0.82
SLC12A4-201ENST00000316341 ATP1A1P05023 1023 aaKnown RBP20.14■□□□□ 0.82
SLC12A4-201ENST00000316341 ATG3Q9NT62 314 aa20.14■□□□□ 0.82
SLC12A4-201ENST00000316341 FAM169AQ9Y6X4 670 aa20.14■□□□□ 0.82
SLC12A4-201ENST00000316341 CLTAP09496 248 aa20.14■□□□□ 0.81
SLC12A4-201ENST00000316341 LACTBP83111 547 aaPredicted RBP20.14■□□□□ 0.81
SLC12A4-201ENST00000316341 TTLL11Q8NHH1 800 aa20.14■□□□□ 0.81
SLC12A4-201ENST00000316341 EFCC1Q9HA90 598 aa20.14■□□□□ 0.81
SLC12A4-201ENST00000316341 TMOD2Q9NZR1 351 aa20.14■□□□□ 0.81
SLC12A4-201ENST00000316341 FRMPD2Q68DX3 1309 aaPredicted RBP20.14■□□□□ 0.81
SLC12A4-201ENST00000316341 KCNJ6P48051 423 aa20.14■□□□□ 0.81
SLC12A4-201ENST00000316341 NEK8Q86SG6 692 aa20.14■□□□□ 0.81
SLC12A4-201ENST00000316341 TUBE1Q9UJT0 475 aa20.14■□□□□ 0.81
SLC12A4-201ENST00000316341 IFNAR2P48551 515 aa20.14■□□□□ 0.81
SLC12A4-201ENST00000316341 ANTXR2P58335 489 aa20.14■□□□□ 0.81
SLC12A4-201ENST00000316341 MLXIPQ9HAP2 919 aa20.14■□□□□ 0.81
SLC12A4-201ENST00000316341 KIF11P52732 1056 aa20.13■□□□□ 0.81
SLC12A4-201ENST00000316341 FOXO4P98177 505 aa20.13■□□□□ 0.81
SLC12A4-201ENST00000316341 RIPOR2Q9Y4F9 1068 aa20.13■□□□□ 0.81
SLC12A4-201ENST00000316341 RPSAP08865 295 aaKnown RBP20.13■□□□□ 0.81
SLC12A4-201ENST00000316341 GKAP1Q5VSY0 366 aaPredicted RBP20.13■□□□□ 0.81
SLC12A4-201ENST00000316341 KCNB2Q92953 911 aa20.13■□□□□ 0.81
SLC12A4-201ENST00000316341 DDAH1O94760 285 aa20.13■□□□□ 0.81
SLC12A4-201ENST00000316341 NLRP10Q86W26 655 aa20.13■□□□□ 0.81
SLC12A4-201ENST00000316341 NOA1Q8NC60 698 aaKnown RBP20.13■□□□□ 0.81
SLC12A4-201ENST00000316341 BICD1Q96G01 975 aa20.13■□□□□ 0.81
SLC12A4-201ENST00000316341 NKIRAS1Q9NYS0 192 aa20.13■□□□□ 0.81
SLC12A4-201ENST00000316341 FEZ2Q9UHY8 353 aaPredicted RBP20.13■□□□□ 0.81
SLC12A4-201ENST00000316341 PCDHA13Q9Y5I0 950 aa20.13■□□□□ 0.81
SLC12A4-201ENST00000316341 GCNT3O95395 438 aa20.13■□□□□ 0.81
SLC12A4-201ENST00000316341 LLGL1Q15334 1064 aa20.13■□□□□ 0.81
SLC12A4-201ENST00000316341 CCDC105Q8IYK2 499 aa20.13■□□□□ 0.81
SLC12A4-201ENST00000316341 ASIC3Q9UHC3 531 aa20.13■□□□□ 0.81
SLC12A4-201ENST00000316341 RGS16O15492 202 aaPredicted RBP20.12■□□□□ 0.81
SLC12A4-201ENST00000316341 GPBP1Q86WP2 473 aa20.12■□□□□ 0.81
SLC12A4-201ENST00000316341 ANKRD2Q9GZV1 360 aa20.12■□□□□ 0.81
SLC12A4-201ENST00000316341 TFR2Q9UP52 801 aa20.12■□□□□ 0.81
SLC12A4-201ENST00000316341 PP2D1A8MPX8 630 aa20.12■□□□□ 0.81
SLC12A4-201ENST00000316341 PLCG1P19174 1290 aa20.12■□□□□ 0.81
SLC12A4-201ENST00000316341 DENND2CQ68D51 928 aa20.12■□□□□ 0.81
SLC12A4-201ENST00000316341 INTS8Q75QN2 995 aaKnown RBP20.12■□□□□ 0.81
SLC12A4-201ENST00000316341 DHTKD1Q96HY7 919 aaPredicted RBP20.12■□□□□ 0.81
SLC12A4-201ENST00000316341 ZNF185O15231 689 aa20.12■□□□□ 0.81
SLC12A4-201ENST00000316341 NAP1L3Q99457 506 aaPredicted RBP20.12■□□□□ 0.81
SLC12A4-201ENST00000316341 FBXO2Q9UK22 296 aaPredicted RBP20.12■□□□□ 0.81
SLC12A4-201ENST00000316341 MTMR3Q13615 1198 aa20.11■□□□□ 0.81
SLC12A4-201ENST00000316341 KRT26Q7Z3Y9 468 aa20.11■□□□□ 0.81
SLC12A4-201ENST00000316341 MMS19Q96T76 1030 aa20.11■□□□□ 0.81
SLC12A4-201ENST00000316341 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.11■□□□□ 0.817e-11■□□□□ 8.5
SLC12A4-201ENST00000316341 FRMD4BQ9Y2L6 1034 aa20.11■□□□□ 0.81
SLC12A4-201ENST00000316341 NRXN1Q9ULB1 1477 aa20.11■□□□□ 0.81
SLC12A4-201ENST00000316341 PRPF3O43395 683 aaKnown RBP20.11■□□□□ 0.81
SLC12A4-201ENST00000316341 NCK2O43639 380 aa20.11■□□□□ 0.81
SLC12A4-201ENST00000316341 SETDB1Q15047 1291 aa20.11■□□□□ 0.81
SLC12A4-201ENST00000316341 HLFQ16534 295 aa20.11■□□□□ 0.81
SLC12A4-201ENST00000316341 FAM26FQ5R3K3 315 aa20.11■□□□□ 0.81
SLC12A4-201ENST00000316341 EYA3Q99504 573 aa20.11■□□□□ 0.81
SLC12A4-201ENST00000316341 HEG1Q9ULI3 1381 aa20.11■□□□□ 0.81
SLC12A4-201ENST00000316341 CCDC87Q9NVE4 849 aa20.11■□□□□ 0.81
SLC12A4-201ENST00000316341 ARPP21Q9UBL0 812 aaPredicted RBP20.11■□□□□ 0.81
SLC12A4-201ENST00000316341 IKBKGQ9Y6K9 419 aa20.11■□□□□ 0.81
SLC12A4-201ENST00000316341 CCNE1P24864 410 aa20.11■□□□□ 0.81
SLC12A4-201ENST00000316341 TRAPPC10P48553 1259 aa20.11■□□□□ 0.81
SLC12A4-201ENST00000316341 NUCKS1Q9H1E3 243 aaKnown RBP20.11■□□□□ 0.81
SLC12A4-201ENST00000316341 AMFRQ9UKV5 643 aa20.11■□□□□ 0.81
SLC12A4-201ENST00000316341 USP14P54578 494 aa20.1■□□□□ 0.81
SLC12A4-201ENST00000316341 FNBP4Q8N3X1 1017 aaPredicted RBP20.1■□□□□ 0.81
SLC12A4-201ENST00000316341 NEXMIFQ5QGS0 1516 aa20.1■□□□□ 0.81
SLC12A4-201ENST00000316341 USP31Q70CQ4 1352 aa20.1■□□□□ 0.81
SLC12A4-201ENST00000316341 NMT2O60551 498 aa20.1■□□□□ 0.81
SLC12A4-201ENST00000316341 NR1D1P20393 614 aa20.1■□□□□ 0.81
SLC12A4-201ENST00000316341 HSPA2P54652 639 aa20.1■□□□□ 0.81
SLC12A4-201ENST00000316341 ADAM9Q13443 819 aa20.1■□□□□ 0.81
SLC12A4-201ENST00000316341 NFRKBQ6P4R8 1299 aa20.1■□□□□ 0.81
SLC12A4-201ENST00000316341 ZNF579Q8NAF0 562 aaKnown RBP20.1■□□□□ 0.81
SLC12A4-201ENST00000316341 PCDHA4Q9UN74 947 aa20.1■□□□□ 0.81
SLC12A4-201ENST00000316341 CCDC170Q8IYT3 715 aa20.1■□□□□ 0.81
SLC12A4-201ENST00000316341 PANK4Q9NVE7 773 aa20.1■□□□□ 0.81
SLC12A4-201ENST00000316341 ZC3H13Q5T200 1668 aaKnown RBP20.1■□□□□ 0.81
SLC12A4-201ENST00000316341 VPS41P49754 854 aa20.1■□□□□ 0.81
SLC12A4-201ENST00000316341 VSIG1Q86XK7 387 aa20.1■□□□□ 0.81
SLC12A4-201ENST00000316341 DISC1Q9NRI5 854 aa20.1■□□□□ 0.81
SLC12A4-201ENST00000316341 STIM2Q9P246 746 aa20.1■□□□□ 0.81
SLC12A4-201ENST00000316341 ARMCX3Q9UH62 379 aaPredicted RBP20.1■□□□□ 0.81
SLC12A4-201ENST00000316341 KIAA1210Q9ULL0 1709 aa20.1■□□□□ 0.81
SLC12A4-201ENST00000316341 A0A1B0GTH6 734 aa20.09■□□□□ 0.81
SLC12A4-201ENST00000316341 NBPF26B4DH59 902 aa20.09■□□□□ 0.81
SLC12A4-201ENST00000316341 XRCC5P13010 732 aaKnown RBP20.09■□□□□ 0.81
SLC12A4-201ENST00000316341 RABL6Q3YEC7 729 aaPredicted RBP20.09■□□□□ 0.81
SLC12A4-201ENST00000316341 NBPF10Q6P3W6 841 aaKnown RBP20.09■□□□□ 0.81
SLC12A4-201ENST00000316341 LRRC47Q8N1G4 583 aaKnown RBP20.09■□□□□ 0.81
SLC12A4-201ENST00000316341 NBPF15Q8N660 670 aa20.09■□□□□ 0.81
SLC12A4-201ENST00000316341 FAM133AQ8N9E0 248 aa20.09■□□□□ 0.81
SLC12A4-201ENST00000316341 RETREG2Q8NC44 543 aa20.09■□□□□ 0.81
SLC12A4-201ENST00000316341 MICAL1Q8TDZ2 1067 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms