RNA–Protein interactions for RNA: ENST00000316099.8

HNF4A-201, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HNF4A, Length 6,445 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-201ENST00000316099 GOLGA8HP0CJ92 632 aa11.93□□□□□ -0.5
HNF4A-201ENST00000316099 CDC27P30260 824 aa11.93□□□□□ -0.5
HNF4A-201ENST00000316099 ANAPC4Q9UJX5 808 aa11.93□□□□□ -0.5
HNF4A-201ENST00000316099 VGLL3A8MV65 326 aa11.92□□□□□ -0.5
HNF4A-201ENST00000316099 ADALQ6DHV7 355 aa11.92□□□□□ -0.5
HNF4A-201ENST00000316099 TMEM87AQ8NBN3 555 aa11.92□□□□□ -0.5
HNF4A-201ENST00000316099 SIPA1L3O60292 1781 aaPredicted RBP11.92□□□□□ -0.5
HNF4A-201ENST00000316099 ANTXR2P58335 489 aa11.92□□□□□ -0.5
HNF4A-201ENST00000316099 ERCC6LQ2NKX8 1250 aa11.92□□□□□ -0.5
HNF4A-201ENST00000316099 SV2BQ7L1I2 683 aa11.92□□□□□ -0.5
HNF4A-201ENST00000316099 CCDC110Q8TBZ0 833 aa11.92□□□□□ -0.5
HNF4A-201ENST00000316099 TSC1Q92574 1164 aa11.92□□□□□ -0.5
HNF4A-201ENST00000316099 KIF23Q02241 960 aaPredicted RBP11.92□□□□□ -0.5
HNF4A-201ENST00000316099 POSTNQ15063 836 aa11.92□□□□□ -0.5
HNF4A-201ENST00000316099 CCDC25Q86WR0 208 aa11.92□□□□□ -0.5
HNF4A-201ENST00000316099 VCXQ9H320 206 aa11.92□□□□□ -0.5
HNF4A-201ENST00000316099 SAMM50Q9Y512 469 aa11.92□□□□□ -0.5
HNF4A-201ENST00000316099 GNA11P29992 359 aa11.92□□□□□ -0.5
HNF4A-201ENST00000316099 FEZ2Q9UHY8 353 aaPredicted RBP11.92□□□□□ -0.5
HNF4A-201ENST00000316099 ATP6V0A2Q9Y487 856 aa11.92□□□□□ -0.5
HNF4A-201ENST00000316099 NFE2L3Q9Y4A8 694 aa11.92□□□□□ -0.5
HNF4A-201ENST00000316099 NMT2O60551 498 aa11.92□□□□□ -0.5
HNF4A-201ENST00000316099 CFAP221Q4G0U5 840 aa11.92□□□□□ -0.5
HNF4A-201ENST00000316099 TBC1D16Q8TBP0 767 aa11.92□□□□□ -0.5
HNF4A-201ENST00000316099 ZBTB9Q96C00 473 aa11.92□□□□□ -0.5
HNF4A-201ENST00000316099 RTEL1Q9NZ71 1219 aa11.92□□□□□ -0.5
HNF4A-201ENST00000316099 FRMPD2Q68DX3 1309 aaPredicted RBP11.92□□□□□ -0.5
HNF4A-201ENST00000316099 USP17L3A6NCW0 530 aa11.91□□□□□ -0.5
HNF4A-201ENST00000316099 USP17L4A6NCW7 530 aa11.91□□□□□ -0.5
HNF4A-201ENST00000316099 RPL13P26373 211 aaKnown RBP11.91□□□□□ -0.5
HNF4A-201ENST00000316099 TTC38Q5R3I4 469 aa11.91□□□□□ -0.5
HNF4A-201ENST00000316099 USP17L1Q7RTZ2 530 aa11.91□□□□□ -0.5
HNF4A-201ENST00000316099 SP8Q8IXZ3 490 aa11.91□□□□□ -0.5
HNF4A-201ENST00000316099 WTIPA6NIX2 430 aaPredicted RBP11.91□□□□□ -0.5
HNF4A-201ENST00000316099 SND1Q7KZF4 910 aaKnown RBP eCLIP11.91□□□□□ -0.5
HNF4A-201ENST00000316099 GPKOWQ92917 476 aaPredicted RBP eCLIP11.91□□□□□ -0.5
HNF4A-201ENST00000316099 MROH7-TTC4A0A0A0MT08 1334 aa11.91□□□□□ -0.5
HNF4A-201ENST00000316099 TCRBV5S4A2TA0A5A2 114 aa11.91□□□□□ -0.5
HNF4A-201ENST00000316099 BICD1Q96G01 975 aa11.91□□□□□ -0.5
HNF4A-201ENST00000316099 CRAMP1Q96RY5 1269 aa11.91□□□□□ -0.5
HNF4A-201ENST00000316099 PLCH1Q4KWH8 1693 aa11.91□□□□□ -0.5
HNF4A-201ENST00000316099 IFNAR1P17181 557 aa11.91□□□□□ -0.5
HNF4A-201ENST00000316099 CEP85LQ5SZL2 805 aa11.91□□□□□ -0.5
HNF4A-201ENST00000316099 LRRC47Q8N1G4 583 aaKnown RBP11.91□□□□□ -0.5
HNF4A-201ENST00000316099 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.91□□□□□ -0.56e-7■■■■■ 42.5
HNF4A-201ENST00000316099 ETF1P62495 437 aaKnown RBP11.91□□□□□ -0.5
HNF4A-201ENST00000316099 ASIC2Q16515 512 aa11.91□□□□□ -0.5
HNF4A-201ENST00000316099 PPP2R2CQ9Y2T4 447 aa11.91□□□□□ -0.5
HNF4A-201ENST00000316099 E7EVH7 732 aa11.9□□□□□ -0.5
HNF4A-201ENST00000316099 POLR2DO15514 142 aaKnown RBP11.9□□□□□ -0.5
HNF4A-201ENST00000316099 CCDC63Q8NA47 563 aa11.9□□□□□ -0.5
HNF4A-201ENST00000316099 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.9□□□□□ -0.5
HNF4A-201ENST00000316099 ZNF408Q9H9D4 720 aa11.9□□□□□ -0.5
HNF4A-201ENST00000316099 LRRC4BQ9NT99 713 aa11.9□□□□□ -0.5
HNF4A-201ENST00000316099 SCG2P13521 617 aa11.9□□□□□ -0.5
HNF4A-201ENST00000316099 CCDC65Q8IXS2 484 aa11.9□□□□□ -0.5
HNF4A-201ENST00000316099 ENAHQ8N8S7 591 aaPredicted RBP11.9□□□□□ -0.5
HNF4A-201ENST00000316099 RNF26Q9BY78 433 aaPredicted RBP11.9□□□□□ -0.5
HNF4A-201ENST00000316099 SERPINA10Q9UK55 444 aa11.9□□□□□ -0.5
HNF4A-201ENST00000316099 PLEKHA8P1O95397 391 aa11.9□□□□□ -0.5
HNF4A-201ENST00000316099 EEF2P13639 858 aaKnown RBP11.9□□□□□ -0.5
HNF4A-201ENST00000316099 NEDD9Q14511 834 aa11.9□□□□□ -0.5
HNF4A-201ENST00000316099 CLIC6Q96NY7 704 aa11.9□□□□□ -0.5
HNF4A-201ENST00000316099 LZTS2Q9BRK4 669 aa11.9□□□□□ -0.5
HNF4A-201ENST00000316099 CSRNP2Q9H175 543 aa11.9□□□□□ -0.5
HNF4A-201ENST00000316099 SENP2Q9HC62 589 aa11.9□□□□□ -0.5
HNF4A-201ENST00000316099 SAR1BQ9Y6B6 198 aa11.9□□□□□ -0.5
HNF4A-201ENST00000316099 PFKFB1P16118 471 aa11.9□□□□□ -0.5
HNF4A-201ENST00000316099 NDUFA8P51970 172 aa11.9□□□□□ -0.5
HNF4A-201ENST00000316099 HS2ST1Q7LGA3 356 aa11.9□□□□□ -0.5
HNF4A-201ENST00000316099 IGDCC4Q8TDY8 1250 aa11.9□□□□□ -0.5
HNF4A-201ENST00000316099 FAM13AO94988 1023 aa11.9□□□□□ -0.5
HNF4A-201ENST00000316099 SLC8A1P32418 973 aa11.9□□□□□ -0.5
HNF4A-201ENST00000316099 KRT9P35527 623 aa11.9□□□□□ -0.5
HNF4A-201ENST00000316099 TNNI2P48788 182 aa11.9□□□□□ -0.5
HNF4A-201ENST00000316099 GNGT1P63211 74 aa11.9□□□□□ -0.5
HNF4A-201ENST00000316099 ZYXQ15942 572 aaKnown RBP11.9□□□□□ -0.5
HNF4A-201ENST00000316099 LETM2Q2VYF4 491 aa11.9□□□□□ -0.5
HNF4A-201ENST00000316099 RGS22Q8NE09 1264 aa11.9□□□□□ -0.5
HNF4A-201ENST00000316099 KIAA1468Q9P260 1216 aa11.9□□□□□ -0.5
HNF4A-201ENST00000316099 ITGB4P16144 1822 aa11.9□□□□□ -0.51
HNF4A-201ENST00000316099 MMP1P03956 469 aa11.89□□□□□ -0.51
HNF4A-201ENST00000316099 PDE4DQ08499 809 aa11.89□□□□□ -0.51
HNF4A-201ENST00000316099 NIM1KQ8IY84 436 aa11.89□□□□□ -0.51
HNF4A-201ENST00000316099 CSGALNACT2Q8N6G5 542 aa11.89□□□□□ -0.51
HNF4A-201ENST00000316099 SYNCQ9H7C4 482 aa11.89□□□□□ -0.51
HNF4A-201ENST00000316099 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.89□□□□□ -0.51
HNF4A-201ENST00000316099 CAPN7Q9Y6W3 813 aa11.89□□□□□ -0.51
HNF4A-201ENST00000316099 CTDNEP1O95476 244 aa11.89□□□□□ -0.51
HNF4A-201ENST00000316099 CDK8P49336 464 aa11.89□□□□□ -0.51
HNF4A-201ENST00000316099 SLC9C1Q4G0N8 1177 aa11.89□□□□□ -0.51
HNF4A-201ENST00000316099 ADGRA1Q86SQ6 560 aa11.89□□□□□ -0.51
HNF4A-201ENST00000316099 TXNRD3Q86VQ6 643 aa11.89□□□□□ -0.51
HNF4A-201ENST00000316099 COL23A1Q86Y22 540 aaPredicted RBP11.89□□□□□ -0.51
HNF4A-201ENST00000316099 ARHGAP24Q8N264 748 aa11.89□□□□□ -0.51
HNF4A-201ENST00000316099 UBL4BQ8N7F7 174 aa11.89□□□□□ -0.51
HNF4A-201ENST00000316099 TDRD7Q8NHU6 1098 aaKnown RBP11.89□□□□□ -0.51
HNF4A-201ENST00000316099 PYCARDQ9ULZ3 195 aa11.89□□□□□ -0.51
HNF4A-201ENST00000316099 LRP6O75581 1613 aa11.89□□□□□ -0.51
HNF4A-201ENST00000316099 KLRF2D3W0D1 207 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms