RNA–Protein interactions for RNA: ENST00000314191.6

PRKDC-201, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKDC, Length 13,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-201ENST00000314191 PI4KBQ9UBF8 816 aa6.88□□□□□ -1.31
PRKDC-201ENST00000314191 CLEC11AQ9Y240 323 aa6.88□□□□□ -1.31
PRKDC-201ENST00000314191 B4DLN1 442 aa6.88□□□□□ -1.31
PRKDC-201ENST00000314191 SBK1Q52WX2 424 aa6.88□□□□□ -1.31
PRKDC-201ENST00000314191 IFT81Q8WYA0 676 aa6.88□□□□□ -1.31
PRKDC-201ENST00000314191 SWAP70Q9UH65 585 aa6.88□□□□□ -1.31
PRKDC-201ENST00000314191 REREQ9P2R6 1566 aa6.88□□□□□ -1.31
PRKDC-201ENST00000314191 TRIM49BA6NDI0 452 aa6.88□□□□□ -1.31
PRKDC-201ENST00000314191 PLCG1P19174 1290 aa6.88□□□□□ -1.31
PRKDC-201ENST00000314191 LMAN1P49257 510 aa6.88□□□□□ -1.31
PRKDC-201ENST00000314191 RNASE9P60153 205 aaKnown RBP6.88□□□□□ -1.31
PRKDC-201ENST00000314191 PTF1AQ7RTS3 328 aa6.88□□□□□ -1.31
PRKDC-201ENST00000314191 METTL16Q86W50 562 aaKnown RBP6.88□□□□□ -1.31
PRKDC-201ENST00000314191 SECISBP2LQ93073 1101 aaKnown RBP6.88□□□□□ -1.31
PRKDC-201ENST00000314191 ORC4O43929 436 aa6.88□□□□□ -1.31
PRKDC-201ENST00000314191 IQCB1Q15051 598 aa6.88□□□□□ -1.31
PRKDC-201ENST00000314191 PODNQ7Z5L7 613 aa6.88□□□□□ -1.31
PRKDC-201ENST00000314191 USP17L10C9JJH3 530 aa6.88□□□□□ -1.31
PRKDC-201ENST00000314191 IFI16Q16666 785 aaKnown RBP6.88□□□□□ -1.31
PRKDC-201ENST00000314191 AK8Q96MA6 479 aa6.88□□□□□ -1.31
PRKDC-201ENST00000314191 DAGLAQ9Y4D2 1042 aa6.88□□□□□ -1.31
PRKDC-201ENST00000314191 GCOM1H8Y6P7 765 aaPredicted RBP6.88□□□□□ -1.31
PRKDC-201ENST00000314191 CCDC172P0C7W6 258 aa6.88□□□□□ -1.31
PRKDC-201ENST00000314191 POLR2MP0CAP2 368 aa6.88□□□□□ -1.31
PRKDC-201ENST00000314191 RCAN1P53805 252 aa6.88□□□□□ -1.31
PRKDC-201ENST00000314191 GRM4Q14833 912 aa6.88□□□□□ -1.31
PRKDC-201ENST00000314191 ENGASEQ8NFI3 743 aa6.88□□□□□ -1.31
PRKDC-201ENST00000314191 TRERF1Q96PN7 1200 aa6.88□□□□□ -1.31
PRKDC-201ENST00000314191 DHX36Q9H2U1 1008 aaKnown RBP6.88□□□□□ -1.31
PRKDC-201ENST00000314191 KCNF1Q9H3M0 494 aa6.88□□□□□ -1.31
PRKDC-201ENST00000314191 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.88□□□□□ -1.31
PRKDC-201ENST00000314191 MEIS1O00470 390 aa6.88□□□□□ -1.31
PRKDC-201ENST00000314191 HARSP12081 509 aaKnown RBP6.88□□□□□ -1.31
PRKDC-201ENST00000314191 AKR1B1P15121 316 aa6.88□□□□□ -1.31
PRKDC-201ENST00000314191 CCNE1P24864 410 aa6.88□□□□□ -1.31
PRKDC-201ENST00000314191 CHRNA5P30532 468 aa6.88□□□□□ -1.31
PRKDC-201ENST00000314191 CETN2P41208 172 aa6.88□□□□□ -1.31
PRKDC-201ENST00000314191 ADAM9Q13443 819 aa6.88□□□□□ -1.31
PRKDC-201ENST00000314191 TUBGCP2Q9BSJ2 902 aa6.88□□□□□ -1.31
PRKDC-201ENST00000314191 CCDC113Q9H0I3 377 aa6.88□□□□□ -1.31
PRKDC-201ENST00000314191 AP5Z1O43299 807 aa6.87□□□□□ -1.31
PRKDC-201ENST00000314191 ASIC2Q16515 512 aa6.87□□□□□ -1.31
PRKDC-201ENST00000314191 CDC37Q16543 378 aaPredicted RBP6.87□□□□□ -1.31
PRKDC-201ENST00000314191 CCDC84Q86UT8 332 aaPredicted RBP6.87□□□□□ -1.31
PRKDC-201ENST00000314191 TSPYL1Q9H0U9 437 aa6.87□□□□□ -1.31
PRKDC-201ENST00000314191 GON4LQ3T8J9 2241 aa6.87□□□□□ -1.31
PRKDC-201ENST00000314191 SOWAHDA6NJG2 315 aa6.87□□□□□ -1.31
PRKDC-201ENST00000314191 GAS7O60861 476 aa6.87□□□□□ -1.31
PRKDC-201ENST00000314191 TROAPQ12815 778 aa6.87□□□□□ -1.31
PRKDC-201ENST00000314191 AOC3Q16853 763 aa6.87□□□□□ -1.31
PRKDC-201ENST00000314191 SLC9C1Q4G0N8 1177 aa6.87□□□□□ -1.31
PRKDC-201ENST00000314191 ZNF772Q68DY9 489 aaPredicted RBP6.87□□□□□ -1.31
PRKDC-201ENST00000314191 MIER3Q7Z3K6 550 aa6.87□□□□□ -1.31
PRKDC-201ENST00000314191 FOXP4Q8IVH2 680 aaPredicted RBP6.87□□□□□ -1.31
PRKDC-201ENST00000314191 CCDC51Q96ER9 411 aa6.87□□□□□ -1.31
PRKDC-201ENST00000314191 SPTLC3Q9NUV7 552 aa6.87□□□□□ -1.31
PRKDC-201ENST00000314191 EPN1Q9Y6I3 576 aaPredicted RBP6.87□□□□□ -1.31
PRKDC-201ENST00000314191 SMIM22K7EJ46 135 aa6.87□□□□□ -1.31
PRKDC-201ENST00000314191 ARHGAP44Q17R89 818 aa6.87□□□□□ -1.31
PRKDC-201ENST00000314191 MRPL44Q9H9J2 332 aaKnown RBP6.87□□□□□ -1.31
PRKDC-201ENST00000314191 BCCIPQ9P287 314 aaKnown RBP eCLIP6.87□□□□□ -1.31
PRKDC-201ENST00000314191 COL5A2P05997 1499 aaPredicted RBP6.87□□□□□ -1.31
PRKDC-201ENST00000314191 H0YHG0 523 aa6.87□□□□□ -1.31
PRKDC-201ENST00000314191 LAD1O00515 517 aa6.87□□□□□ -1.31
PRKDC-201ENST00000314191 CTNNBL1Q8WYA6 563 aaPredicted RBP6.87□□□□□ -1.31
PRKDC-201ENST00000314191 hCG_1984214I3L0E3 225 aa6.87□□□□□ -1.31
PRKDC-201ENST00000314191 GH2P01242 217 aa6.87□□□□□ -1.31
PRKDC-201ENST00000314191 ZNF713Q8N859 430 aaPredicted RBP6.87□□□□□ -1.31
PRKDC-201ENST00000314191 ZNF579Q8NAF0 562 aaKnown RBP6.87□□□□□ -1.31
PRKDC-201ENST00000314191 SORBS3O60504 671 aa6.87□□□□□ -1.31
PRKDC-201ENST00000314191 ARL6IP4Q66PJ3 421 aaKnown RBP6.87□□□□□ -1.31
PRKDC-201ENST00000314191 RWDD2AQ9UIY3 292 aa6.87□□□□□ -1.31
PRKDC-201ENST00000314191 FRMD4BQ9Y2L6 1034 aa6.87□□□□□ -1.31
PRKDC-201ENST00000314191 E9PMD0 336 aa6.87□□□□□ -1.31
PRKDC-201ENST00000314191 CALUO43852 315 aaPredicted RBP6.87□□□□□ -1.31
PRKDC-201ENST00000314191 KIAA0753Q2KHM9 967 aa6.87□□□□□ -1.31
PRKDC-201ENST00000314191 SLC27A3Q5K4L6 730 aa6.87□□□□□ -1.31
PRKDC-201ENST00000314191 MAATS1Q7Z4T9 603 aa6.87□□□□□ -1.31
PRKDC-201ENST00000314191 MRPL11Q9Y3B7 192 aaKnown RBP6.87□□□□□ -1.31
PRKDC-201ENST00000314191 FLT1P17948 1338 aa6.87□□□□□ -1.31
PRKDC-201ENST00000314191 TEX33O43247 280 aa6.87□□□□□ -1.31
PRKDC-201ENST00000314191 EPB41P11171 864 aaKnown RBP6.87□□□□□ -1.31
PRKDC-201ENST00000314191 CYP2J2P51589 502 aa6.87□□□□□ -1.31
PRKDC-201ENST00000314191 KMT5BQ4FZB7 885 aa6.87□□□□□ -1.31
PRKDC-201ENST00000314191 SLC10A5Q5PT55 438 aa6.87□□□□□ -1.31
PRKDC-201ENST00000314191 AGXT2Q9BYV1 514 aa6.87□□□□□ -1.31
PRKDC-201ENST00000314191 DISC1Q9NRI5 854 aa6.87□□□□□ -1.31
PRKDC-201ENST00000314191 BCL9O00512 1426 aa6.87□□□□□ -1.31
PRKDC-201ENST00000314191 CERKQ8TCT0 537 aa6.87□□□□□ -1.31
PRKDC-201ENST00000314191 TCRBV5S4A2TA0A5A2 114 aa6.87□□□□□ -1.31
PRKDC-201ENST00000314191 TESPA1A2RU30 521 aaPredicted RBP6.87□□□□□ -1.31
PRKDC-201ENST00000314191 ANO3Q9BYT9 981 aa6.87□□□□□ -1.31
PRKDC-201ENST00000314191 PLEKHA4Q9H4M7 779 aa6.87□□□□□ -1.31
PRKDC-201ENST00000314191 ECE2O60344 883 aa6.86□□□□□ -1.31
PRKDC-201ENST00000314191 FLOT1O75955 427 aa6.86□□□□□ -1.31
PRKDC-201ENST00000314191 HOXA13P31271 388 aaPredicted RBP6.86□□□□□ -1.31
PRKDC-201ENST00000314191 GJC1P36383 396 aa6.86□□□□□ -1.31
PRKDC-201ENST00000314191 VGLL2Q8N8G2 317 aa6.86□□□□□ -1.31
PRKDC-201ENST00000314191 CRAMP1Q96RY5 1269 aa6.86□□□□□ -1.31
PRKDC-201ENST00000314191 SH3GLB2Q9NR46 395 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms