RNA–Protein interactions for RNA: ENST00000312423.2

SWSAP1-201, Transcript of SWIM-type zinc finger 7 associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SWSAP1, Length 1,684 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1-201ENST00000312423 CDC27P30260 824 aa20.27■□□□□ 0.84
SWSAP1-201ENST00000312423 EVCP57679 992 aa20.27■□□□□ 0.84
SWSAP1-201ENST00000312423 MAP2K5Q13163 448 aa20.27■□□□□ 0.84
SWSAP1-201ENST00000312423 PPP2R5BQ15173 497 aa20.27■□□□□ 0.84
SWSAP1-201ENST00000312423 MUM1L1Q5H9M0 696 aa20.27■□□□□ 0.84
SWSAP1-201ENST00000312423 MTMR8Q96EF0 704 aa20.27■□□□□ 0.84
SWSAP1-201ENST00000312423 DDX11Q96FC9 970 aa20.27■□□□□ 0.84
SWSAP1-201ENST00000312423 ZNF274Q96GC6 653 aaPredicted RBP20.27■□□□□ 0.84
SWSAP1-201ENST00000312423 AMNQ9BXJ7 453 aa20.27■□□□□ 0.84
SWSAP1-201ENST00000312423 SMCHD1A6NHR9 2005 aa20.27■□□□□ 0.84
SWSAP1-201ENST00000312423 SMARCA1P28370 1054 aa20.26■□□□□ 0.83
SWSAP1-201ENST00000312423 ADD1P35611 737 aaKnown RBP20.26■□□□□ 0.83
SWSAP1-201ENST00000312423 ABRAQ8N0Z2 381 aa20.26■□□□□ 0.83
SWSAP1-201ENST00000312423 NCOA5Q9HCD5 579 aaKnown RBP20.26■□□□□ 0.83
SWSAP1-201ENST00000312423 ZNF236Q9UL36 1845 aa20.26■□□□□ 0.83
SWSAP1-201ENST00000312423 ZNFX1Q9P2E3 1918 aaKnown RBP20.26■□□□□ 0.83
SWSAP1-201ENST00000312423 PNMA6FA0A0J9YX94 578 aa20.26■□□□□ 0.83
SWSAP1-201ENST00000312423 hCG_1642624A0A1W2PR95 340 aa20.26■□□□□ 0.83
SWSAP1-201ENST00000312423 PGK2P07205 417 aa20.26■□□□□ 0.83
SWSAP1-201ENST00000312423 RABEP1Q15276 862 aa20.26■□□□□ 0.83
SWSAP1-201ENST00000312423 NSMFQ6X4W1 530 aa20.26■□□□□ 0.83
SWSAP1-201ENST00000312423 APBA2Q99767 749 aa20.26■□□□□ 0.83
SWSAP1-201ENST00000312423 FAM217BQ9NTX9 383 aaPredicted RBP20.26■□□□□ 0.83
SWSAP1-201ENST00000312423 SLC5A4Q9NY91 659 aa20.26■□□□□ 0.83
SWSAP1-201ENST00000312423 TPCN1Q9ULQ1 816 aa20.26■□□□□ 0.83
SWSAP1-201ENST00000312423 PCDHA1Q9Y5I3 950 aa20.26■□□□□ 0.83
SWSAP1-201ENST00000312423 ABCB11O95342 1321 aa20.25■□□□□ 0.83
SWSAP1-201ENST00000312423 NID2Q14112 1375 aa20.25■□□□□ 0.83
SWSAP1-201ENST00000312423 ADCY3O60266 1144 aa20.25■□□□□ 0.83
SWSAP1-201ENST00000312423 IRF5Q13568 498 aa20.25■□□□□ 0.83
SWSAP1-201ENST00000312423 SLC9C1Q4G0N8 1177 aa20.25■□□□□ 0.83
SWSAP1-201ENST00000312423 SLKQ9H2G2 1235 aaPredicted RBP20.25■□□□□ 0.83
SWSAP1-201ENST00000312423 BIN2Q9UBW5 565 aaPredicted RBP20.25■□□□□ 0.83
SWSAP1-201ENST00000312423 CNTNAP5Q8WYK1 1306 aa20.25■□□□□ 0.83
SWSAP1-201ENST00000312423 NFIBO00712 420 aa20.24■□□□□ 0.83
SWSAP1-201ENST00000312423 CPLX1O14810 134 aa20.24■□□□□ 0.83
SWSAP1-201ENST00000312423 PPP1R11O60927 126 aaPredicted RBP20.24■□□□□ 0.83
SWSAP1-201ENST00000312423 ELNP15502 786 aa20.24■□□□□ 0.83
SWSAP1-201ENST00000312423 TRAF1Q13077 416 aa20.24■□□□□ 0.83
SWSAP1-201ENST00000312423 TNS4Q8IZW8 715 aa20.24■□□□□ 0.83
SWSAP1-201ENST00000312423 USP6NLQ92738 828 aa20.24■□□□□ 0.83
SWSAP1-201ENST00000312423 MRPL11Q9Y3B7 192 aaKnown RBP20.24■□□□□ 0.83
SWSAP1-201ENST00000312423 PTPDC1A2A3K4 754 aa20.23■□□□□ 0.83
SWSAP1-201ENST00000312423 GRK4P32298 578 aa20.23■□□□□ 0.83
SWSAP1-201ENST00000312423 SLAIN1Q8ND83 568 aa20.23■□□□□ 0.83
SWSAP1-201ENST00000312423 SH3TC2Q8TF17 1288 aa20.23■□□□□ 0.83
SWSAP1-201ENST00000312423 A1CFQ9NQ94 594 aaKnown RBP20.23■□□□□ 0.83
SWSAP1-201ENST00000312423 PFASO15067 1338 aa20.23■□□□□ 0.83
SWSAP1-201ENST00000312423 RBBP6Q7Z6E9 1792 aaKnown RBP20.23■□□□□ 0.83
SWSAP1-201ENST00000312423 PLXNA1Q9UIW2 1896 aa20.23■□□□□ 0.83
SWSAP1-201ENST00000312423 ST18O60284 1047 aa20.22■□□□□ 0.83
SWSAP1-201ENST00000312423 COBLO75128 1261 aa20.22■□□□□ 0.83
SWSAP1-201ENST00000312423 NPLOC4Q8TAT6 608 aa20.22■□□□□ 0.83
SWSAP1-201ENST00000312423 CLEC4DQ8WXI8 215 aa20.22■□□□□ 0.83
SWSAP1-201ENST00000312423 V9GY48 417 aaPredicted RBP20.22■□□□□ 0.83
SWSAP1-201ENST00000312423 PPFIA3O75145 1194 aa20.22■□□□□ 0.83
SWSAP1-201ENST00000312423 XRCC5P13010 732 aaKnown RBP20.22■□□□□ 0.83
SWSAP1-201ENST00000312423 AKAP17AQ02040 695 aaKnown RBP20.22■□□□□ 0.83
SWSAP1-201ENST00000312423 FUT2Q10981 343 aa20.22■□□□□ 0.83
SWSAP1-201ENST00000312423 CCL14Q16627 93 aa20.22■□□□□ 0.83
SWSAP1-201ENST00000312423 CPLX2Q6PUV4 134 aaKnown RBP20.22■□□□□ 0.83
SWSAP1-201ENST00000312423 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.22■□□□□ 0.83
SWSAP1-201ENST00000312423 PHKBQ93100 1093 aa20.22■□□□□ 0.83
SWSAP1-201ENST00000312423 POTEB2H3BUK9 544 aa20.21■□□□□ 0.83
SWSAP1-201ENST00000312423 RNF207Q6ZRF8 634 aa20.21■□□□□ 0.83
SWSAP1-201ENST00000312423 HEATR3Q7Z4Q2 680 aa20.21■□□□□ 0.83
SWSAP1-201ENST00000312423 TRMT44Q8IYL2 757 aaKnown RBP20.21■□□□□ 0.83
SWSAP1-201ENST00000312423 PXYLP1Q8TE99 480 aa20.21■□□□□ 0.83
SWSAP1-201ENST00000312423 CYP39A1Q9NYL5 469 aa20.21■□□□□ 0.83
SWSAP1-201ENST00000312423 PFKFB2O60825 505 aa20.2■□□□□ 0.82
SWSAP1-201ENST00000312423 HOXC6P09630 235 aa20.2■□□□□ 0.82
SWSAP1-201ENST00000312423 CALML3P27482 149 aa20.2■□□□□ 0.82
SWSAP1-201ENST00000312423 SCRN1Q12765 414 aa20.2■□□□□ 0.82
SWSAP1-201ENST00000312423 BAATQ14032 418 aaPredicted RBP20.2■□□□□ 0.82
SWSAP1-201ENST00000312423 ME3Q16798 604 aa20.2■□□□□ 0.82
SWSAP1-201ENST00000312423 MCF2L2Q86YR7 1114 aa20.2■□□□□ 0.82
SWSAP1-201ENST00000312423 TRIB2Q92519 343 aa20.2■□□□□ 0.82
SWSAP1-201ENST00000312423 GPKOWQ92917 476 aaPredicted RBP eCLIP20.2■□□□□ 0.82
SWSAP1-201ENST00000312423 SLC26A6Q9BXS9 759 aa20.2■□□□□ 0.82
SWSAP1-201ENST00000312423 LIMCH1Q9UPQ0 1083 aa20.2■□□□□ 0.82
SWSAP1-201ENST00000312423 LARGE1O95461 756 aa20.19■□□□□ 0.82
SWSAP1-201ENST00000312423 MYCP01106 439 aaPredicted RBP20.19■□□□□ 0.82
SWSAP1-201ENST00000312423 SLC30A10Q6XR72 485 aa20.19■□□□□ 0.82
SWSAP1-201ENST00000312423 NECAB1Q8N987 351 aa20.19■□□□□ 0.82
SWSAP1-201ENST00000312423 DNAJC25-GNG10A0A024R161 153 aa20.19■□□□□ 0.82
SWSAP1-201ENST00000312423 CFBP00751 764 aa20.19■□□□□ 0.82
SWSAP1-201ENST00000312423 HMGCRP04035 888 aa20.19■□□□□ 0.82
SWSAP1-201ENST00000312423 IFNAR1P17181 557 aa20.19■□□□□ 0.82
SWSAP1-201ENST00000312423 CNTN2Q02246 1040 aa20.19■□□□□ 0.82
SWSAP1-201ENST00000312423 NTRK3Q16288 839 aa20.19■□□□□ 0.82
SWSAP1-201ENST00000312423 ZNF792Q3KQV3 632 aa20.19■□□□□ 0.82
SWSAP1-201ENST00000312423 TRIM22Q8IYM9 498 aa20.19■□□□□ 0.82
SWSAP1-201ENST00000312423 MAML3Q96JK9 1138 aa20.19■□□□□ 0.82
SWSAP1-201ENST00000312423 FLRT1Q9NZU1 646 aa20.19■□□□□ 0.82
SWSAP1-201ENST00000312423 CDKL5O76039 1030 aa20.18■□□□□ 0.82
SWSAP1-201ENST00000312423 INHAP05111 366 aa20.18■□□□□ 0.82
SWSAP1-201ENST00000312423 RPS6P62753 249 aaKnown RBP20.18■□□□□ 0.82
SWSAP1-201ENST00000312423 UBXN2AP68543 259 aa20.18■□□□□ 0.82
SWSAP1-201ENST00000312423 SSRP1Q08945 709 aaKnown RBP20.18■□□□□ 0.82
SWSAP1-201ENST00000312423 MFSD14CQ5VZR4 134 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms