RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 ZNF830Q96NB3 372 aaPredicted RBP24.09■■□□□ 1.45
ATG4D-201ENST00000309469 PCDHA1Q9Y5I3 950 aa24.09■■□□□ 1.45
ATG4D-201ENST00000309469 TMEM232C9JQI7 657 aa24.08■■□□□ 1.45
ATG4D-201ENST00000309469 ECE1P42892 770 aa24.08■■□□□ 1.45
ATG4D-201ENST00000309469 TNNI2P48788 182 aa24.08■■□□□ 1.45
ATG4D-201ENST00000309469 RASSF7Q02833 373 aa24.08■■□□□ 1.45
ATG4D-201ENST00000309469 DPYDQ12882 1025 aa24.08■■□□□ 1.45
ATG4D-201ENST00000309469 SYDE2Q5VT97 1194 aa24.08■■□□□ 1.45
ATG4D-201ENST00000309469 GLT8D2Q9H1C3 349 aa24.08■■□□□ 1.45
ATG4D-201ENST00000309469 TMX2Q9Y320 296 aa24.08■■□□□ 1.45
ATG4D-201ENST00000309469 MYL5Q02045 173 aa24.08■■□□□ 1.44
ATG4D-201ENST00000309469 MAP3K10Q02779 954 aa24.08■■□□□ 1.44
ATG4D-201ENST00000309469 BTNL9Q6UXG8 535 aa24.08■■□□□ 1.44
ATG4D-201ENST00000309469 ACER1Q8TDN7 264 aa24.08■■□□□ 1.44
ATG4D-201ENST00000309469 CCSER1Q9C0I3 900 aa24.08■■□□□ 1.44
ATG4D-201ENST00000309469 EDIL3O43854 480 aa24.07■■□□□ 1.44
ATG4D-201ENST00000309469 ZNF500O60304 480 aaPredicted RBP24.07■■□□□ 1.44
ATG4D-201ENST00000309469 UBA7P41226 1012 aa24.07■■□□□ 1.44
ATG4D-201ENST00000309469 IKQ13123 557 aaPredicted RBP24.07■■□□□ 1.44
ATG4D-201ENST00000309469 AK8Q96MA6 479 aa24.07■■□□□ 1.44
ATG4D-201ENST00000309469 TTC12Q9H892 705 aaPredicted RBP24.07■■□□□ 1.44
ATG4D-201ENST00000309469 DACH1Q9UI36 760 aa24.07■■□□□ 1.44
ATG4D-201ENST00000309469 PP2D1A8MPX8 630 aa24.06■■□□□ 1.44
ATG4D-201ENST00000309469 CAP2P40123 477 aa24.06■■□□□ 1.44
ATG4D-201ENST00000309469 PRELPP51888 382 aa24.06■■□□□ 1.44
ATG4D-201ENST00000309469 KARSQ15046 597 aaKnown RBP24.06■■□□□ 1.44
ATG4D-201ENST00000309469 GSDMAQ96QA5 445 aa24.06■■□□□ 1.44
ATG4D-201ENST00000309469 DISC1Q9NRI5 854 aa24.06■■□□□ 1.44
ATG4D-201ENST00000309469 FZD9O00144 591 aa24.06■■□□□ 1.44
ATG4D-201ENST00000309469 EGFRP00533 1210 aa24.06■■□□□ 1.44
ATG4D-201ENST00000309469 CASP1P29466 404 aa24.06■■□□□ 1.44
ATG4D-201ENST00000309469 GMPSP49915 693 aaPredicted RBP24.06■■□□□ 1.44
ATG4D-201ENST00000309469 RASA3Q14644 834 aa24.06■■□□□ 1.44
ATG4D-201ENST00000309469 POTEDQ86YR6 584 aa24.06■■□□□ 1.44
ATG4D-201ENST00000309469 SPICE1Q8N0Z3 855 aa24.06■■□□□ 1.44
ATG4D-201ENST00000309469 UPF1Q92900 1129 aaKnown RBP eCLIP24.06■■□□□ 1.443e-7■□□□□ 9.9
ATG4D-201ENST00000309469 AMNQ9BXJ7 453 aa24.06■■□□□ 1.44
ATG4D-201ENST00000309469 GOPCQ9HD26 462 aa24.06■■□□□ 1.44
ATG4D-201ENST00000309469 STAT6P42226 847 aa24.05■■□□□ 1.44
ATG4D-201ENST00000309469 STAMQ92783 540 aa24.05■■□□□ 1.44
ATG4D-201ENST00000309469 DPF2Q92785 391 aa24.05■■□□□ 1.44
ATG4D-201ENST00000309469 MTMR9Q96QG7 549 aa24.05■■□□□ 1.44
ATG4D-201ENST00000309469 SNAP25P60880 206 aa24.04■■□□□ 1.44
ATG4D-201ENST00000309469 RRAGBQ5VZM2 374 aa24.04■■□□□ 1.44
ATG4D-201ENST00000309469 FBXO11Q86XK2 927 aa24.04■■□□□ 1.44
ATG4D-201ENST00000309469 MTRQ99707 1265 aa24.04■■□□□ 1.44
ATG4D-201ENST00000309469 HSD3B7Q9H2F3 369 aa24.04■■□□□ 1.44
ATG4D-201ENST00000309469 GJA3Q9Y6H8 435 aa24.04■■□□□ 1.44
ATG4D-201ENST00000309469 ARFGEF1Q9Y6D6 1849 aa24.04■■□□□ 1.44
ATG4D-201ENST00000309469 GTPBP6O43824 516 aaPredicted RBP24.04■■□□□ 1.44
ATG4D-201ENST00000309469 TDP2O95551 362 aa24.04■■□□□ 1.44
ATG4D-201ENST00000309469 TNFAIP1Q13829 316 aa24.04■■□□□ 1.44
ATG4D-201ENST00000309469 CALCRLQ16602 461 aa24.04■■□□□ 1.44
ATG4D-201ENST00000309469 KIAA1755Q5JYT7 1200 aa24.04■■□□□ 1.44
ATG4D-201ENST00000309469 PPP4R3AQ6IN85 833 aa24.04■■□□□ 1.44
ATG4D-201ENST00000309469 MICALL2Q8IY33 904 aa24.04■■□□□ 1.44
ATG4D-201ENST00000309469 NLGN2Q8NFZ4 835 aa24.04■■□□□ 1.44
ATG4D-201ENST00000309469 LMOD1P29536 600 aaPredicted RBP24.03■■□□□ 1.44
ATG4D-201ENST00000309469 TECP42680 631 aa24.03■■□□□ 1.44
ATG4D-201ENST00000309469 CCDC186Q7Z3E2 898 aa24.03■■□□□ 1.44
ATG4D-201ENST00000309469 RASSF8Q8NHQ8 419 aa24.03■■□□□ 1.44
ATG4D-201ENST00000309469 NRBP1Q9UHY1 535 aa24.03■■□□□ 1.44
ATG4D-201ENST00000309469 PRR12Q9ULL5 1215 aa24.03■■□□□ 1.44
ATG4D-201ENST00000309469 SCAF8Q9UPN6 1271 aaKnown RBP24.03■■□□□ 1.44
ATG4D-201ENST00000309469 USP17L15C9J2P7 530 aa24.02■■□□□ 1.44
ATG4D-201ENST00000309469 USP17L13C9JLJ4 530 aa24.02■■□□□ 1.44
ATG4D-201ENST00000309469 USP17L11C9JVI0 530 aa24.02■■□□□ 1.44
ATG4D-201ENST00000309469 USP17L18D6R9N7 530 aa24.02■■□□□ 1.44
ATG4D-201ENST00000309469 USP17L22D6RA61 530 aa24.02■■□□□ 1.44
ATG4D-201ENST00000309469 USP17L17D6RBQ6 530 aa24.02■■□□□ 1.44
ATG4D-201ENST00000309469 USP17L19D6RCP7 530 aa24.02■■□□□ 1.44
ATG4D-201ENST00000309469 USP17L20D6RJB6 530 aa24.02■■□□□ 1.44
ATG4D-201ENST00000309469 SLC37A4O43826 429 aa24.02■■□□□ 1.44
ATG4D-201ENST00000309469 PTGS1P23219 599 aa24.02■■□□□ 1.44
ATG4D-201ENST00000309469 USP17L24Q0WX57 530 aa24.02■■□□□ 1.44
ATG4D-201ENST00000309469 NAALADL2Q58DX5 795 aa24.02■■□□□ 1.44
ATG4D-201ENST00000309469 CT47A1Q5JQC4 288 aaPredicted RBP24.02■■□□□ 1.44
ATG4D-201ENST00000309469 USP17L6PQ6QN14 398 aa24.02■■□□□ 1.44
ATG4D-201ENST00000309469 CABP7Q86V35 215 aa24.02■■□□□ 1.44
ATG4D-201ENST00000309469 BLZF1Q9H2G9 400 aa24.02■■□□□ 1.44
ATG4D-201ENST00000309469 CNOT7Q9UIV1 285 aaKnown RBP24.02■■□□□ 1.44
ATG4D-201ENST00000309469 TXKP42681 527 aa24.02■■□□□ 1.44
ATG4D-201ENST00000309469 STAT2P52630 851 aa24.02■■□□□ 1.44
ATG4D-201ENST00000309469 SAMD7Q7Z3H4 446 aa24.02■■□□□ 1.44
ATG4D-201ENST00000309469 IGSF22Q8N9C0 903 aa24.02■■□□□ 1.44
ATG4D-201ENST00000309469 TEPSINQ96N21 525 aa24.02■■□□□ 1.44
ATG4D-201ENST00000309469 SH2D4AQ9H788 454 aa24.02■■□□□ 1.44
ATG4D-201ENST00000309469 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.02■■□□□ 1.44
ATG4D-201ENST00000309469 ASNSP08243 561 aa24.01■■□□□ 1.43
ATG4D-201ENST00000309469 CUL4BQ13620 913 aa24.01■■□□□ 1.43
ATG4D-201ENST00000309469 FAM83BQ5T0W9 1011 aa24.01■■□□□ 1.43
ATG4D-201ENST00000309469 ENOX1Q8TC92 643 aaKnown RBP24.01■■□□□ 1.43
ATG4D-201ENST00000309469 KCNF1Q9H3M0 494 aa24.01■■□□□ 1.43
ATG4D-201ENST00000309469 VCPKMTQ9H867 229 aa24.01■■□□□ 1.43
ATG4D-201ENST00000309469 FANCLQ9NW38 375 aa24.01■■□□□ 1.43
ATG4D-201ENST00000309469 IFNKQ9P0W0 207 aa24.01■■□□□ 1.43
ATG4D-201ENST00000309469 ERCC5P28715 1186 aaPredicted RBP24■■□□□ 1.43
ATG4D-201ENST00000309469 FXR2P51116 673 aaKnown RBP eCLIP24■■□□□ 1.43
ATG4D-201ENST00000309469 FMR1Q06787 632 aaKnown RBP eCLIP24■■□□□ 1.43
ATG4D-201ENST00000309469 NAP1L4Q99733 375 aaKnown RBP24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms