RNA–Protein interactions for RNA: ENST00000309422.6

VEGFB-201, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFB, Length 1,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-201ENST00000309422 B4DLN1 442 aa23■■□□□ 1.27
VEGFB-201ENST00000309422 RPS6KB1P23443 525 aa23■■□□□ 1.27
VEGFB-201ENST00000309422 CYP2C19P33261 490 aa23■■□□□ 1.27
VEGFB-201ENST00000309422 MRPL12P52815 198 aaKnown RBP23■■□□□ 1.27
VEGFB-201ENST00000309422 CACNB2Q08289 660 aaPredicted RBP23■■□□□ 1.27
VEGFB-201ENST00000309422 ZNF792Q3KQV3 632 aa23■■□□□ 1.27
VEGFB-201ENST00000309422 ZNF467Q7Z7K2 595 aaPredicted RBP23■■□□□ 1.27
VEGFB-201ENST00000309422 TINF2Q9BSI4 451 aa23■■□□□ 1.27
VEGFB-201ENST00000309422 JMJD4Q9H9V9 463 aa23■■□□□ 1.27
VEGFB-201ENST00000309422 NRBP1Q9UHY1 535 aa23■■□□□ 1.27
VEGFB-201ENST00000309422 KLF18A0A0U1RQI7 1052 aa22.99■■□□□ 1.27
VEGFB-201ENST00000309422 CCDC196A0A1B0GTZ2 297 aa22.99■■□□□ 1.27
VEGFB-201ENST00000309422 GOLGA8AA7E2F4 631 aa22.99■■□□□ 1.27
VEGFB-201ENST00000309422 GOLGA8BA8MQT2 603 aa22.99■■□□□ 1.27
VEGFB-201ENST00000309422 TFRCP02786 760 aaKnown RBP22.99■■□□□ 1.27
VEGFB-201ENST00000309422 GJA8P48165 433 aa22.99■■□□□ 1.27
VEGFB-201ENST00000309422 ANAPC15P60006 121 aa22.99■■□□□ 1.27
VEGFB-201ENST00000309422 EXOSC10Q01780 885 aaKnown RBP22.99■■□□□ 1.27
VEGFB-201ENST00000309422 RTN1Q16799 776 aa22.99■■□□□ 1.27
VEGFB-201ENST00000309422 MAP3K21Q5TCX8 1036 aa22.99■■□□□ 1.27
VEGFB-201ENST00000309422 RNF207Q6ZRF8 634 aa22.99■■□□□ 1.27
VEGFB-201ENST00000309422 CCDC144CPQ8IYA2 1237 aa22.99■■□□□ 1.27
VEGFB-201ENST00000309422 U2AF1L4Q8WU68 220 aaKnown RBP22.99■■□□□ 1.27
VEGFB-201ENST00000309422 MAF1Q9H063 256 aa22.99■■□□□ 1.27
VEGFB-201ENST00000309422 PAK6Q9NQU5 681 aaPredicted RBP22.99■■□□□ 1.27
VEGFB-201ENST00000309422 GPHNQ9NQX3 736 aaPredicted RBP22.99■■□□□ 1.27
VEGFB-201ENST00000309422 SYNGAP1Q96PV0 1343 aa22.99■■□□□ 1.27
VEGFB-201ENST00000309422 POTEFA5A3E0 1075 aa22.98■■□□□ 1.27
VEGFB-201ENST00000309422 ASB14A6NK59 587 aa22.98■■□□□ 1.27
VEGFB-201ENST00000309422 RCAN1P53805 252 aa22.98■■□□□ 1.27
VEGFB-201ENST00000309422 TRIM32Q13049 653 aa22.98■■□□□ 1.27
VEGFB-201ENST00000309422 MUM1L1Q5H9M0 696 aa22.98■■□□□ 1.27
VEGFB-201ENST00000309422 APOA5Q6Q788 366 aa22.98■■□□□ 1.27
VEGFB-201ENST00000309422 Q6ZUG5 572 aa22.98■■□□□ 1.27
VEGFB-201ENST00000309422 SPZ1Q9BXG8 430 aa22.98■■□□□ 1.27
VEGFB-201ENST00000309422 UPF2Q9HAU5 1272 aaKnown RBP22.98■■□□□ 1.27
VEGFB-201ENST00000309422 CYP39A1Q9NYL5 469 aa22.98■■□□□ 1.27
VEGFB-201ENST00000309422 FLRT1Q9NZU1 646 aa22.98■■□□□ 1.27
VEGFB-201ENST00000309422 RXRAP19793 462 aa22.97■■□□□ 1.27
VEGFB-201ENST00000309422 CALML3P27482 149 aa22.97■■□□□ 1.27
VEGFB-201ENST00000309422 SMARCA1P28370 1054 aa22.97■■□□□ 1.27
VEGFB-201ENST00000309422 PPP2R5BQ15173 497 aa22.97■■□□□ 1.27
VEGFB-201ENST00000309422 RUFY3Q7L099 469 aa22.97■■□□□ 1.27
VEGFB-201ENST00000309422 FANCBQ8NB91 859 aa22.97■■□□□ 1.27
VEGFB-201ENST00000309422 TM6SF1Q9BZW5 370 aa22.97■■□□□ 1.27
VEGFB-201ENST00000309422 DNAJC25-GNG10A0A024R161 153 aa22.96■■□□□ 1.27
VEGFB-201ENST00000309422 PNMA6FA0A0J9YX94 578 aa22.96■■□□□ 1.27
VEGFB-201ENST00000309422 NFIBO00712 420 aa22.96■■□□□ 1.27
VEGFB-201ENST00000309422 SGPL1O95470 568 aa22.96■■□□□ 1.27
VEGFB-201ENST00000309422 METAP2P50579 478 aaKnown RBP eCLIP22.96■■□□□ 1.27
VEGFB-201ENST00000309422 MLLT1Q03111 559 aaPredicted RBP22.96■■□□□ 1.27
VEGFB-201ENST00000309422 BRF1Q92994 677 aa22.96■■□□□ 1.27
VEGFB-201ENST00000309422 PIGSQ96S52 555 aa22.96■■□□□ 1.27
VEGFB-201ENST00000309422 RIOX1Q9H6W3 641 aa22.96■■□□□ 1.27
VEGFB-201ENST00000309422 ZHX1Q9UKY1 873 aaPredicted RBP22.96■■□□□ 1.27
VEGFB-201ENST00000309422 PCDHA1Q9Y5I3 950 aa22.96■■□□□ 1.27
VEGFB-201ENST00000309422 EN2P19622 333 aaPredicted RBP22.95■■□□□ 1.26
VEGFB-201ENST00000309422 RAB11FIP4Q86YS3 637 aa22.95■■□□□ 1.26
VEGFB-201ENST00000309422 PIBF1Q8WXW3 757 aa22.95■■□□□ 1.26
VEGFB-201ENST00000309422 DDX20Q9UHI6 824 aaKnown RBP22.95■■□□□ 1.26
VEGFB-201ENST00000309422 CYBAP13498 195 aa22.94■■□□□ 1.26
VEGFB-201ENST00000309422 TAL1P17542 331 aaPredicted RBP22.94■■□□□ 1.26
VEGFB-201ENST00000309422 CCND3P30281 292 aaPredicted RBP22.94■■□□□ 1.26
VEGFB-201ENST00000309422 BAATQ14032 418 aaPredicted RBP22.94■■□□□ 1.26
VEGFB-201ENST00000309422 FAM133AQ8N9E0 248 aa22.94■■□□□ 1.26
VEGFB-201ENST00000309422 ZSWIM6Q9HCJ5 1215 aa22.94■■□□□ 1.26
VEGFB-201ENST00000309422 LOC102724159A0A0B4J2E5 919 aa22.93■■□□□ 1.26
VEGFB-201ENST00000309422 SEPT4O43236 478 aa22.93■■□□□ 1.26
VEGFB-201ENST00000309422 CPA1P15085 419 aa22.93■■□□□ 1.26
VEGFB-201ENST00000309422 PWP2Q15269 919 aaKnown RBP22.93■■□□□ 1.26
VEGFB-201ENST00000309422 MAMDC4Q6UXC1 1216 aa22.93■■□□□ 1.26
VEGFB-201ENST00000309422 TMTC3Q6ZXV5 915 aa22.93■■□□□ 1.26
VEGFB-201ENST00000309422 ARMCX2Q7L311 632 aa22.93■■□□□ 1.26
VEGFB-201ENST00000309422 RGS22Q8NE09 1264 aa22.93■■□□□ 1.26
VEGFB-201ENST00000309422 FARP2O94887 1054 aaPredicted RBP22.92■■□□□ 1.26
VEGFB-201ENST00000309422 RARBP10826 455 aa22.92■■□□□ 1.26
VEGFB-201ENST00000309422 AKR1A1P14550 325 aa22.92■■□□□ 1.26
VEGFB-201ENST00000309422 RPS6P62753 249 aaKnown RBP22.92■■□□□ 1.26
VEGFB-201ENST00000309422 APOBRQ0VD83 1088 aa22.92■■□□□ 1.26
VEGFB-201ENST00000309422 ANKLE1Q8NAG6 615 aa22.92■■□□□ 1.26
VEGFB-201ENST00000309422 CLEC4DQ8WXI8 215 aa22.92■■□□□ 1.26
VEGFB-201ENST00000309422 CUL5Q93034 780 aa22.92■■□□□ 1.26
VEGFB-201ENST00000309422 MTMR8Q96EF0 704 aa22.92■■□□□ 1.26
VEGFB-201ENST00000309422 UPF3BQ9BZI7 483 aaKnown RBP22.92■■□□□ 1.26
VEGFB-201ENST00000309422 ABHD16BQ9H3Z7 469 aa22.92■■□□□ 1.26
VEGFB-201ENST00000309422 PDRG1Q9NUG6 133 aa22.92■■□□□ 1.26
VEGFB-201ENST00000309422 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.92■■□□□ 1.26
VEGFB-201ENST00000309422 GTF3C3Q9Y5Q9 886 aa22.92■■□□□ 1.26
VEGFB-201ENST00000309422 DOCK3Q8IZD9 2030 aa22.92■■□□□ 1.26
VEGFB-201ENST00000309422 PLEKHA8P1O95397 391 aa22.91■■□□□ 1.26
VEGFB-201ENST00000309422 CFBP00751 764 aa22.91■■□□□ 1.26
VEGFB-201ENST00000309422 AKAP17AQ02040 695 aaKnown RBP22.91■■□□□ 1.26
VEGFB-201ENST00000309422 CNTN2Q02246 1040 aa22.91■■□□□ 1.26
VEGFB-201ENST00000309422 ANKRD1Q15327 319 aa22.91■■□□□ 1.26
VEGFB-201ENST00000309422 SLC30A10Q6XR72 485 aa22.91■■□□□ 1.26
VEGFB-201ENST00000309422 FBXL16Q8N461 479 aa22.91■■□□□ 1.26
VEGFB-201ENST00000309422 SAMD3Q8N6K7 520 aa22.91■■□□□ 1.26
VEGFB-201ENST00000309422 DNERQ8NFT8 737 aa22.91■■□□□ 1.26
VEGFB-201ENST00000309422 MAP3K20Q9NYL2 800 aaKnown RBP22.91■■□□□ 1.26
VEGFB-201ENST00000309422 RBBP6Q7Z6E9 1792 aaKnown RBP22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms