RNA–Protein interactions for RNA: ENST00000305699.15

FANCA-201, Transcript of FA complementation group A, humanhuman

TSL 2

Gene FANCA, Length 1,430 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-201ENST00000305699 SNHG28P0DPA3 235 aa18.31■□□□□ 0.52
FANCA-201ENST00000305699 SNX17Q15036 470 aa18.31■□□□□ 0.52
FANCA-201ENST00000305699 NOL8Q76FK4 1167 aaKnown RBP18.31■□□□□ 0.52
FANCA-201ENST00000305699 ZSCAN10Q96SZ4 725 aaPredicted RBP18.31■□□□□ 0.52
FANCA-201ENST00000305699 TSEN34Q9BSV6 310 aaKnown RBP18.31■□□□□ 0.52
FANCA-201ENST00000305699 RAD50Q92878 1312 aa18.3■□□□□ 0.52
FANCA-201ENST00000305699 ACLYP53396 1101 aa18.3■□□□□ 0.52
FANCA-201ENST00000305699 TLE2Q04725 743 aa18.3■□□□□ 0.52
FANCA-201ENST00000305699 BAATQ14032 418 aaPredicted RBP18.3■□□□□ 0.52
FANCA-201ENST00000305699 GPATCH4Q5T3I0 446 aaKnown RBP18.3■□□□□ 0.52
FANCA-201ENST00000305699 LRCH3Q96II8 777 aa18.3■□□□□ 0.52
FANCA-201ENST00000305699 CNNM2Q9H8M5 875 aa18.3■□□□□ 0.52
FANCA-201ENST00000305699 ZSWIM5Q9P217 1185 aa18.3■□□□□ 0.52
FANCA-201ENST00000305699 PNMA2Q9UL42 364 aa18.3■□□□□ 0.52
FANCA-201ENST00000305699 DDX49Q9Y6V7 483 aaKnown RBP18.3■□□□□ 0.52
FANCA-201ENST00000305699 PTPDC1A2A3K4 754 aa18.29■□□□□ 0.52
FANCA-201ENST00000305699 MYADML2A6NDP7 307 aa18.29■□□□□ 0.52
FANCA-201ENST00000305699 NFIBO00712 420 aa18.29■□□□□ 0.52
FANCA-201ENST00000305699 ADCY6O43306 1168 aa18.29■□□□□ 0.52
FANCA-201ENST00000305699 CHMLP26374 656 aa18.29■□□□□ 0.52
FANCA-201ENST00000305699 KCNA10Q16322 511 aa18.29■□□□□ 0.52
FANCA-201ENST00000305699 C1orf53Q5VUE5 145 aa18.29■□□□□ 0.52
FANCA-201ENST00000305699 ENAHQ8N8S7 591 aaPredicted RBP18.29■□□□□ 0.52
FANCA-201ENST00000305699 KLHDC9Q8NEP7 349 aa18.29■□□□□ 0.52
FANCA-201ENST00000305699 NUP133Q8WUM0 1156 aa18.29■□□□□ 0.52
FANCA-201ENST00000305699 PURBQ96QR8 312 aaKnown RBP18.29■□□□□ 0.52
FANCA-201ENST00000305699 UBAC1Q9BSL1 405 aa18.29■□□□□ 0.52
FANCA-201ENST00000305699 KATNBL1Q9H079 304 aa18.29■□□□□ 0.52
FANCA-201ENST00000305699 STARD7Q9NQZ5 370 aa18.29■□□□□ 0.52
FANCA-201ENST00000305699 TNKSO95271 1327 aa18.29■□□□□ 0.52
FANCA-201ENST00000305699 MOXD2PA6NHM9 499 aa18.28■□□□□ 0.52
FANCA-201ENST00000305699 PQBP1O60828 265 aaKnown RBP18.28■□□□□ 0.52
FANCA-201ENST00000305699 TNFAIP2Q03169 654 aa18.28■□□□□ 0.52
FANCA-201ENST00000305699 GNASQ5JWF2 1037 aa18.28■□□□□ 0.52
FANCA-201ENST00000305699 EEPD1Q7L9B9 569 aa18.28■□□□□ 0.52
FANCA-201ENST00000305699 PCSK9Q8NBP7 692 aaKnown RBP18.28■□□□□ 0.52
FANCA-201ENST00000305699 VTI1AQ96AJ9 217 aa18.28■□□□□ 0.52
FANCA-201ENST00000305699 UBA5Q9GZZ9 404 aa18.28■□□□□ 0.52
FANCA-201ENST00000305699 CPVLQ9H3G5 476 aa18.28■□□□□ 0.52
FANCA-201ENST00000305699 PDLIM7Q9NR12 457 aa18.28■□□□□ 0.52
FANCA-201ENST00000305699 ADD3Q9UEY8 706 aaKnown RBP18.28■□□□□ 0.52
FANCA-201ENST00000305699 DHX16O60231 1041 aaKnown RBP18.27■□□□□ 0.52
FANCA-201ENST00000305699 CALML3P27482 149 aa18.27■□□□□ 0.52
FANCA-201ENST00000305699 GJA9P57773 515 aa18.27■□□□□ 0.52
FANCA-201ENST00000305699 IRX5P78411 483 aaPredicted RBP18.27■□□□□ 0.52
FANCA-201ENST00000305699 USH1GQ495M9 461 aa18.27■□□□□ 0.52
FANCA-201ENST00000305699 FBXO16Q8IX29 292 aaPredicted RBP18.27■□□□□ 0.52
FANCA-201ENST00000305699 ANKS1AQ92625 1134 aa18.27■□□□□ 0.52
FANCA-201ENST00000305699 GLT1D1Q96MS3 346 aa18.27■□□□□ 0.52
FANCA-201ENST00000305699 ASTN1O14525 1302 aa18.27■□□□□ 0.52
FANCA-201ENST00000305699 WDR19Q8NEZ3 1342 aa18.27■□□□□ 0.52
FANCA-201ENST00000305699 LTBP2Q14767 1821 aa18.27■□□□□ 0.51
FANCA-201ENST00000305699 LCTP09848 1927 aa18.26■□□□□ 0.51
FANCA-201ENST00000305699 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.26■□□□□ 0.51
FANCA-201ENST00000305699 CST5P28325 142 aaPredicted RBP18.26■□□□□ 0.51
FANCA-201ENST00000305699 TRDNQ13061 729 aa18.26■□□□□ 0.51
FANCA-201ENST00000305699 IFIT1BQ5T764 474 aaKnown RBP18.26■□□□□ 0.51
FANCA-201ENST00000305699 SLC30A10Q6XR72 485 aa18.26■□□□□ 0.51
FANCA-201ENST00000305699 RNF207Q6ZRF8 634 aa18.26■□□□□ 0.51
FANCA-201ENST00000305699 SH3RF1Q7Z6J0 888 aa18.26■□□□□ 0.51
FANCA-201ENST00000305699 UPF3AQ9H1J1 476 aaKnown RBP18.26■□□□□ 0.51
FANCA-201ENST00000305699 LRRC37A2A6NM11 1700 aa18.26■□□□□ 0.51
FANCA-201ENST00000305699 ASGR1P07306 291 aa18.25■□□□□ 0.51
FANCA-201ENST00000305699 CLTBP09497 229 aa18.25■□□□□ 0.51
FANCA-201ENST00000305699 PARP1P09874 1014 aaKnown RBP18.25■□□□□ 0.51
FANCA-201ENST00000305699 PTH1RQ03431 593 aa18.25■□□□□ 0.51
FANCA-201ENST00000305699 LRIT3Q3SXY7 679 aa18.25■□□□□ 0.51
FANCA-201ENST00000305699 ASPRV1Q53RT3 343 aa18.25■□□□□ 0.51
FANCA-201ENST00000305699 CCSAPQ6IQ19 270 aaPredicted RBP18.25■□□□□ 0.51
FANCA-201ENST00000305699 TLK2Q86UE8 772 aa18.25■□□□□ 0.51
FANCA-201ENST00000305699 CLEC4DQ8WXI8 215 aa18.25■□□□□ 0.51
FANCA-201ENST00000305699 VTA1Q9NP79 307 aa18.25■□□□□ 0.51
FANCA-201ENST00000305699 PDGFCQ9NRA1 345 aa18.25■□□□□ 0.51
FANCA-201ENST00000305699 U3KPZ7 1027 aaPredicted RBP18.25■□□□□ 0.51
FANCA-201ENST00000305699 TRIM43BA6NCK2 446 aa18.24■□□□□ 0.51
FANCA-201ENST00000305699 DCDC2CA8MYV0 355 aa18.24■□□□□ 0.51
FANCA-201ENST00000305699 ALDH5A1P51649 535 aaPredicted RBP18.24■□□□□ 0.51
FANCA-201ENST00000305699 BEX3Q00994 111 aa18.24■□□□□ 0.51
FANCA-201ENST00000305699 CDC37Q16543 378 aaPredicted RBP18.24■□□□□ 0.51
FANCA-201ENST00000305699 BADQ92934 168 aa18.24■□□□□ 0.51
FANCA-201ENST00000305699 TRIM43Q96BQ3 446 aaPredicted RBP18.24■□□□□ 0.51
FANCA-201ENST00000305699 AP5M1Q9H0R1 490 aa18.24■□□□□ 0.51
FANCA-201ENST00000305699 CYP21A2P08686 494 aa18.23■□□□□ 0.51
FANCA-201ENST00000305699 SMPD1P17405 629 aa18.23■□□□□ 0.51
FANCA-201ENST00000305699 RPS6P62753 249 aaKnown RBP18.23■□□□□ 0.51
FANCA-201ENST00000305699 IQSEC1Q6DN90 963 aa18.23■□□□□ 0.51
FANCA-201ENST00000305699 TAPT1Q6NXT6 567 aa18.23■□□□□ 0.51
FANCA-201ENST00000305699 KIAA1211Q6ZU35 1233 aa18.23■□□□□ 0.51
FANCA-201ENST00000305699 CYB5R4Q7L1T6 521 aa18.23■□□□□ 0.51
FANCA-201ENST00000305699 RALYLQ86SE5 291 aaKnown RBP18.23■□□□□ 0.51
FANCA-201ENST00000305699 ADGRF4Q8IZF3 695 aa18.23■□□□□ 0.51
FANCA-201ENST00000305699 MPHOSPH6Q99547 160 aaKnown RBP18.23■□□□□ 0.51
FANCA-201ENST00000305699 VAT1LQ9HCJ6 419 aa18.23■□□□□ 0.51
FANCA-201ENST00000305699 TMEM39AQ9NV64 488 aa18.23■□□□□ 0.51
FANCA-201ENST00000305699 ELP1O95163 1332 aa18.23■□□□□ 0.51
FANCA-201ENST00000305699 SGSM2O43147 1006 aa18.23■□□□□ 0.51
FANCA-201ENST00000305699 DYNC1LI2O43237 492 aaPredicted RBP18.23■□□□□ 0.51
FANCA-201ENST00000305699 RAG1P15918 1043 aa18.23■□□□□ 0.51
FANCA-201ENST00000305699 PDE4DQ08499 809 aa18.23■□□□□ 0.51
FANCA-201ENST00000305699 MORC4Q8TE76 937 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms