RNA–Protein interactions for RNA: ENST00000302538.9

ABR-202, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABR, Length 5,289 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-202ENST00000302538 FAM170AA1A519 330 aa14.39□□□□□ -0.11
ABR-202ENST00000302538 XRCC5P13010 732 aaKnown RBP14.39□□□□□ -0.11
ABR-202ENST00000302538 CACNB3P54284 484 aa14.39□□□□□ -0.11
ABR-202ENST00000302538 SMC6Q96SB8 1091 aa14.39□□□□□ -0.11
ABR-202ENST00000302538 PPP1R16BQ96T49 567 aa14.39□□□□□ -0.11
ABR-202ENST00000302538 KDM2BQ8NHM5 1336 aa14.39□□□□□ -0.11
ABR-202ENST00000302538 DTNBO60941 627 aa14.39□□□□□ -0.11
ABR-202ENST00000302538 ZNF202O95125 648 aa14.39□□□□□ -0.11
ABR-202ENST00000302538 ELF1P32519 619 aa14.39□□□□□ -0.11
ABR-202ENST00000302538 ITIH3Q06033 890 aa14.39□□□□□ -0.11
ABR-202ENST00000302538 BSPRYQ5W0U4 402 aa14.39□□□□□ -0.11
ABR-202ENST00000302538 ARHGEF1Q92888 912 aaKnown RBP14.39□□□□□ -0.11
ABR-202ENST00000302538 PANK4Q9NVE7 773 aa14.39□□□□□ -0.11
ABR-202ENST00000302538 RABGAP1Q9Y3P9 1069 aa14.39□□□□□ -0.11
ABR-202ENST00000302538 KIAA1210Q9ULL0 1709 aa14.39□□□□□ -0.11
ABR-202ENST00000302538 HNRNPDLO14979 420 aaKnown RBP14.39□□□□□ -0.11
ABR-202ENST00000302538 ATP2C2O75185 946 aa14.39□□□□□ -0.11
ABR-202ENST00000302538 NUP58Q9BVL2 599 aa14.39□□□□□ -0.11
ABR-202ENST00000302538 SYNJ2BP-COX16A0A087WUM0 186 aa14.38□□□□□ -0.11
ABR-202ENST00000302538 ADD1P35611 737 aaKnown RBP14.38□□□□□ -0.11
ABR-202ENST00000302538 KRT81Q14533 505 aa14.38□□□□□ -0.11
ABR-202ENST00000302538 CLUL1Q15846 466 aa14.38□□□□□ -0.11
ABR-202ENST00000302538 FAM160B2Q86V87 743 aa14.38□□□□□ -0.11
ABR-202ENST00000302538 APOBEC3FQ8IUX4 373 aaKnown RBP14.38□□□□□ -0.11
ABR-202ENST00000302538 TRIM7Q9C029 511 aa14.38□□□□□ -0.11
ABR-202ENST00000302538 COX16Q9P0S2 106 aa14.38□□□□□ -0.11
ABR-202ENST00000302538 GNA14O95837 355 aa14.38□□□□□ -0.11
ABR-202ENST00000302538 XRCC6P12956 609 aaKnown RBP eCLIP14.38□□□□□ -0.11
ABR-202ENST00000302538 CRKP46108 304 aa14.38□□□□□ -0.11
ABR-202ENST00000302538 KIF11P52732 1056 aa14.38□□□□□ -0.11
ABR-202ENST00000302538 RNASE9P60153 205 aaKnown RBP14.38□□□□□ -0.11
ABR-202ENST00000302538 FRMPD1Q5SYB0 1578 aa14.38□□□□□ -0.11
ABR-202ENST00000302538 BAG1Q99933 345 aaPredicted RBP14.38□□□□□ -0.11
ABR-202ENST00000302538 RIPOR2Q9Y4F9 1068 aa14.38□□□□□ -0.11
ABR-202ENST00000302538 PTPRUQ92729 1446 aa14.38□□□□□ -0.11
ABR-202ENST00000302538 PTPREP23469 700 aa14.38□□□□□ -0.11
ABR-202ENST00000302538 LACTBP83111 547 aaPredicted RBP14.38□□□□□ -0.11
ABR-202ENST00000302538 GPBP1L1Q9HC44 474 aaPredicted RBP14.38□□□□□ -0.11
ABR-202ENST00000302538 GPR108Q9NPR9 543 aa14.38□□□□□ -0.11
ABR-202ENST00000302538 NCOA3Q9Y6Q9 1424 aa14.38□□□□□ -0.11
ABR-202ENST00000302538 KDM4FA0A1W2PPD8 638 aa14.38□□□□□ -0.11
ABR-202ENST00000302538 GMNNO75496 209 aa14.38□□□□□ -0.11
ABR-202ENST00000302538 NOSTRINQ8IVI9 506 aa14.38□□□□□ -0.11
ABR-202ENST00000302538 ZMYM6O95789 1325 aa14.38□□□□□ -0.11
ABR-202ENST00000302538 C8orf34Q49A92 452 aa14.37□□□□□ -0.11
ABR-202ENST00000302538 ODR4Q5SWX8 454 aa14.37□□□□□ -0.11
ABR-202ENST00000302538 ZNF274Q96GC6 653 aaPredicted RBP14.37□□□□□ -0.11
ABR-202ENST00000302538 CEP170P1Q96L14 293 aa14.37□□□□□ -0.11
ABR-202ENST00000302538 KIF9Q9HAQ2 790 aa14.37□□□□□ -0.11
ABR-202ENST00000302538 STAM2O75886 525 aa14.37□□□□□ -0.11
ABR-202ENST00000302538 VAV2P52735 878 aa14.37□□□□□ -0.11
ABR-202ENST00000302538 CUL4BQ13620 913 aa14.37□□□□□ -0.11
ABR-202ENST00000302538 FAM49AQ9H0Q0 323 aaPredicted RBP14.37□□□□□ -0.11
ABR-202ENST00000302538 TDRD3Q9H7E2 651 aaKnown RBP14.37□□□□□ -0.11
ABR-202ENST00000302538 NFX1Q12986 1120 aaKnown RBP14.37□□□□□ -0.11
ABR-202ENST00000302538 SFMBT2Q5VUG0 894 aa14.37□□□□□ -0.11
ABR-202ENST00000302538 DYNLL2Q96FJ2 89 aa14.37□□□□□ -0.11
ABR-202ENST00000302538 OTUD5Q96G74 571 aa14.37□□□□□ -0.11
ABR-202ENST00000302538 GCNAQ96QF7 691 aa14.37□□□□□ -0.11
ABR-202ENST00000302538 MIS12Q9H081 205 aa14.37□□□□□ -0.11
ABR-202ENST00000302538 PNPLA6Q8IY17 1366 aa14.37□□□□□ -0.11
ABR-202ENST00000302538 CARMIL3Q8ND23 1372 aa14.37□□□□□ -0.11
ABR-202ENST00000302538 MECOMQ03112 1051 aa14.36□□□□□ -0.11
ABR-202ENST00000302538 CEP128Q6ZU80 1094 aa14.36□□□□□ -0.11
ABR-202ENST00000302538 SRRTQ9BXP5 876 aaKnown RBP14.36□□□□□ -0.11
ABR-202ENST00000302538 SNX25Q9H3E2 840 aa14.36□□□□□ -0.11
ABR-202ENST00000302538 SOS2Q07890 1332 aaPredicted RBP14.36□□□□□ -0.11
ABR-202ENST00000302538 NEURL4Q96JN8 1562 aa14.36□□□□□ -0.11
ABR-202ENST00000302538 OPA1O60313 960 aa14.36□□□□□ -0.11
ABR-202ENST00000302538 N4BP1O75113 896 aaKnown RBP14.36□□□□□ -0.11
ABR-202ENST00000302538 PODNQ7Z5L7 613 aa14.36□□□□□ -0.11
ABR-202ENST00000302538 DISC1Q9NRI5 854 aa14.36□□□□□ -0.11
ABR-202ENST00000302538 SERTAD1Q9UHV2 236 aa14.36□□□□□ -0.11
ABR-202ENST00000302538 TECPR2O15040 1411 aa14.36□□□□□ -0.11
ABR-202ENST00000302538 GH2P01242 217 aa14.36□□□□□ -0.11
ABR-202ENST00000302538 PIK3CAP42336 1068 aa14.36□□□□□ -0.11
ABR-202ENST00000302538 CCDC6Q16204 474 aa14.36□□□□□ -0.11
ABR-202ENST00000302538 RC3H1Q5TC82 1133 aaKnown RBP14.36□□□□□ -0.11
ABR-202ENST00000302538 CYP26C1Q6V0L0 522 aa14.36□□□□□ -0.11
ABR-202ENST00000302538 HOXC10Q9NYD6 342 aa14.36□□□□□ -0.11
ABR-202ENST00000302538 DBNLQ9UJU6 430 aaKnown RBP14.36□□□□□ -0.11
ABR-202ENST00000302538 POLIQ9UNA4 740 aa14.36□□□□□ -0.11
ABR-202ENST00000302538 COL15A1P39059 1388 aa14.36□□□□□ -0.11
ABR-202ENST00000302538 EIF2AK2P19525 551 aaKnown RBP14.36□□□□□ -0.11
ABR-202ENST00000302538 TBC1D9BQ66K14 1250 aa14.36□□□□□ -0.11
ABR-202ENST00000302538 CCDC84Q86UT8 332 aaPredicted RBP14.36□□□□□ -0.11
ABR-202ENST00000302538 SLITRK6Q9H5Y7 841 aa14.36□□□□□ -0.11
ABR-202ENST00000302538 NLRC4Q9NPP4 1024 aa14.36□□□□□ -0.11
ABR-202ENST00000302538 FAM207AQ9NSI2 230 aaPredicted RBP14.36□□□□□ -0.11
ABR-202ENST00000302538 DIP2AQ14689 1571 aa14.36□□□□□ -0.11
ABR-202ENST00000302538 KCNQ2O43526 872 aa14.35□□□□□ -0.11
ABR-202ENST00000302538 HSPA4P34932 840 aa14.35□□□□□ -0.11
ABR-202ENST00000302538 PLCB4Q15147 1175 aa14.35□□□□□ -0.11
ABR-202ENST00000302538 HLFQ16534 295 aa14.35□□□□□ -0.11
ABR-202ENST00000302538 PDZD4Q76G19 769 aaPredicted RBP14.35□□□□□ -0.11
ABR-202ENST00000302538 RYBPQ8N488 228 aaPredicted RBP14.35□□□□□ -0.11
ABR-202ENST00000302538 PIGSQ96S52 555 aa14.35□□□□□ -0.11
ABR-202ENST00000302538 ASIC3Q9UHC3 531 aa14.35□□□□□ -0.11
ABR-202ENST00000302538 KIAA1024Q9UPX6 916 aa14.35□□□□□ -0.11
ABR-202ENST00000302538 ARHGEF37A1IGU5 675 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms