RNA–Protein interactions for RNA: ENST00000297265.4

CHMP4C-201, Transcript of charged multivesicular body protein 4C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4C, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4C-201ENST00000297265 LTBP3Q9NS15 1303 aa15.41■□□□□ 0.06
CHMP4C-201ENST00000297265 SMCHD1A6NHR9 2005 aa15.41■□□□□ 0.06
CHMP4C-201ENST00000297265 KARSQ15046 597 aaKnown RBP15.41■□□□□ 0.06
CHMP4C-201ENST00000297265 MIGA2Q7L4E1 593 aa15.41■□□□□ 0.06
CHMP4C-201ENST00000297265 IQUBQ8NA54 791 aa15.41■□□□□ 0.06
CHMP4C-201ENST00000297265 CCSER1Q9C0I3 900 aa15.41■□□□□ 0.06
CHMP4C-201ENST00000297265 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.41■□□□□ 0.06
CHMP4C-201ENST00000297265 BCS1LQ9Y276 419 aa15.41■□□□□ 0.06
CHMP4C-201ENST00000297265 TMX2Q9Y320 296 aa15.41■□□□□ 0.06
CHMP4C-201ENST00000297265 SMTNL1A8MU46 457 aa15.4■□□□□ 0.06
CHMP4C-201ENST00000297265 RAD21O60216 631 aa15.4■□□□□ 0.06
CHMP4C-201ENST00000297265 NEMFO60524 1076 aa15.4■□□□□ 0.06
CHMP4C-201ENST00000297265 OR52Z1P0C646 297 aa15.4■□□□□ 0.06
CHMP4C-201ENST00000297265 ATP1A3P13637 1013 aa15.4■□□□□ 0.06
CHMP4C-201ENST00000297265 FMR1Q06787 632 aaKnown RBP eCLIP15.4■□□□□ 0.06
CHMP4C-201ENST00000297265 CDC37Q16543 378 aaPredicted RBP15.4■□□□□ 0.06
CHMP4C-201ENST00000297265 POTEDQ86YR6 584 aa15.4■□□□□ 0.06
CHMP4C-201ENST00000297265 P2RX7Q99572 595 aaKnown RBP15.4■□□□□ 0.06
CHMP4C-201ENST00000297265 DISC1Q9NRI5 854 aa15.4■□□□□ 0.06
CHMP4C-201ENST00000297265 ZBTB21Q9ULJ3 1066 aa15.4■□□□□ 0.06
CHMP4C-201ENST00000297265 TMEM232C9JQI7 657 aa15.4■□□□□ 0.06
CHMP4C-201ENST00000297265 FZD9O00144 591 aa15.4■□□□□ 0.06
CHMP4C-201ENST00000297265 MEIS2O14770 477 aa15.4■□□□□ 0.06
CHMP4C-201ENST00000297265 SLC37A4O43826 429 aa15.4■□□□□ 0.06
CHMP4C-201ENST00000297265 TDP2O95551 362 aa15.4■□□□□ 0.06
CHMP4C-201ENST00000297265 PTGS1P23219 599 aa15.4■□□□□ 0.06
CHMP4C-201ENST00000297265 SNAP25P60880 206 aa15.4■□□□□ 0.06
CHMP4C-201ENST00000297265 RASSF7Q02833 373 aa15.4■□□□□ 0.06
CHMP4C-201ENST00000297265 ORC2Q13416 577 aaPredicted RBP15.4■□□□□ 0.06
CHMP4C-201ENST00000297265 CCDC186Q7Z3E2 898 aa15.4■□□□□ 0.06
CHMP4C-201ENST00000297265 IGSF22Q8N9C0 903 aa15.4■□□□□ 0.06
CHMP4C-201ENST00000297265 MLKLQ8NB16 471 aa15.4■□□□□ 0.06
CHMP4C-201ENST00000297265 TEPSINQ96N21 525 aa15.4■□□□□ 0.06
CHMP4C-201ENST00000297265 GSDMAQ96QA5 445 aa15.4■□□□□ 0.06
CHMP4C-201ENST00000297265 PSTPIP2Q9H939 334 aa15.4■□□□□ 0.06
CHMP4C-201ENST00000297265 PCDHA1Q9Y5I3 950 aa15.4■□□□□ 0.06
CHMP4C-201ENST00000297265 USP17L15C9J2P7 530 aa15.39■□□□□ 0.05
CHMP4C-201ENST00000297265 USP17L13C9JLJ4 530 aa15.39■□□□□ 0.05
CHMP4C-201ENST00000297265 USP17L11C9JVI0 530 aa15.39■□□□□ 0.05
CHMP4C-201ENST00000297265 USP17L18D6R9N7 530 aa15.39■□□□□ 0.05
CHMP4C-201ENST00000297265 USP17L22D6RA61 530 aa15.39■□□□□ 0.05
CHMP4C-201ENST00000297265 USP17L17D6RBQ6 530 aa15.39■□□□□ 0.05
CHMP4C-201ENST00000297265 USP17L19D6RCP7 530 aa15.39■□□□□ 0.05
CHMP4C-201ENST00000297265 USP17L20D6RJB6 530 aa15.39■□□□□ 0.05
CHMP4C-201ENST00000297265 BMP3P12645 472 aa15.39■□□□□ 0.05
CHMP4C-201ENST00000297265 CD44P16070 742 aaKnown RBP15.39■□□□□ 0.05
CHMP4C-201ENST00000297265 LMOD1P29536 600 aaPredicted RBP15.39■□□□□ 0.05
CHMP4C-201ENST00000297265 CAP2P40123 477 aa15.39■□□□□ 0.05
CHMP4C-201ENST00000297265 MYL5Q02045 173 aa15.39■□□□□ 0.05
CHMP4C-201ENST00000297265 USP17L24Q0WX57 530 aa15.39■□□□□ 0.05
CHMP4C-201ENST00000297265 CUL4BQ13620 913 aa15.39■□□□□ 0.05
CHMP4C-201ENST00000297265 TNIP1Q15025 636 aa15.39■□□□□ 0.05
CHMP4C-201ENST00000297265 USP17L6PQ6QN14 398 aa15.39■□□□□ 0.05
CHMP4C-201ENST00000297265 SPICE1Q8N0Z3 855 aa15.39■□□□□ 0.05
CHMP4C-201ENST00000297265 NLGN2Q8NFZ4 835 aa15.39■□□□□ 0.05
CHMP4C-201ENST00000297265 CUL5Q93034 780 aa15.39■□□□□ 0.05
CHMP4C-201ENST00000297265 MMTAG2Q9BU76 263 aaKnown RBP15.39■□□□□ 0.05
CHMP4C-201ENST00000297265 FANCLQ9NW38 375 aa15.39■□□□□ 0.05
CHMP4C-201ENST00000297265 PSDA5PKW4 1024 aaPredicted RBP15.38■□□□□ 0.05
CHMP4C-201ENST00000297265 PHF20L1A8MW92 1017 aa15.38■□□□□ 0.05
CHMP4C-201ENST00000297265 MRPL12P52815 198 aaKnown RBP15.38■□□□□ 0.05
CHMP4C-201ENST00000297265 PPP4R3AQ6IN85 833 aa15.38■□□□□ 0.05
CHMP4C-201ENST00000297265 PYM1Q9BRP8 204 aaKnown RBP15.38■□□□□ 0.05
CHMP4C-201ENST00000297265 BLZF1Q9H2G9 400 aa15.38■□□□□ 0.05
CHMP4C-201ENST00000297265 ASTN2O75129 1339 aaPredicted RBP15.38■□□□□ 0.05
CHMP4C-201ENST00000297265 OPLAHO14841 1288 aa15.37■□□□□ 0.05
CHMP4C-201ENST00000297265 MYO1BO43795 1136 aa15.37■□□□□ 0.05
CHMP4C-201ENST00000297265 SMC2O95347 1197 aa15.37■□□□□ 0.05
CHMP4C-201ENST00000297265 TECP42680 631 aa15.37■□□□□ 0.05
CHMP4C-201ENST00000297265 RASA3Q14644 834 aa15.37■□□□□ 0.05
CHMP4C-201ENST00000297265 SYDE2Q5VT97 1194 aa15.37■□□□□ 0.05
CHMP4C-201ENST00000297265 CRYGNQ8WXF5 182 aa15.37■□□□□ 0.05
CHMP4C-201ENST00000297265 UPF1Q92900 1129 aaKnown RBP eCLIP15.37■□□□□ 0.05
CHMP4C-201ENST00000297265 AK8Q96MA6 479 aa15.37■□□□□ 0.05
CHMP4C-201ENST00000297265 GLIS2Q9BZE0 524 aaPredicted RBP15.37■□□□□ 0.05
CHMP4C-201ENST00000297265 XPO4Q9C0E2 1151 aaKnown RBP15.37■□□□□ 0.05
CHMP4C-201ENST00000297265 PPP1R3GB7ZBB8 358 aa15.37■□□□□ 0.05
CHMP4C-201ENST00000297265 ZNF18P17022 549 aa15.37■□□□□ 0.05
CHMP4C-201ENST00000297265 TAL1P17542 331 aaPredicted RBP15.37■□□□□ 0.05
CHMP4C-201ENST00000297265 RPS12P25398 132 aaKnown RBP15.37■□□□□ 0.05
CHMP4C-201ENST00000297265 MMP14P50281 582 aa15.37■□□□□ 0.05
CHMP4C-201ENST00000297265 SAMD7Q7Z3H4 446 aa15.37■□□□□ 0.05
CHMP4C-201ENST00000297265 ENOX1Q8TC92 643 aaKnown RBP15.37■□□□□ 0.05
CHMP4C-201ENST00000297265 KBTBD4Q9NVX7 518 aa15.37■□□□□ 0.05
CHMP4C-201ENST00000297265 IFNKQ9P0W0 207 aa15.37■□□□□ 0.05
CHMP4C-201ENST00000297265 PRR12Q9ULL5 1215 aa15.37■□□□□ 0.05
CHMP4C-201ENST00000297265 PYCARDQ9ULZ3 195 aa15.37■□□□□ 0.05
CHMP4C-201ENST00000297265 GOLGA6L6A8MZA4 724 aa15.36■□□□□ 0.05
CHMP4C-201ENST00000297265 GTPBP6O43824 516 aaPredicted RBP15.36■□□□□ 0.05
CHMP4C-201ENST00000297265 TPM3P06753 285 aa15.36■□□□□ 0.05
CHMP4C-201ENST00000297265 UBA7P41226 1012 aa15.36■□□□□ 0.05
CHMP4C-201ENST00000297265 TNNI2P48788 182 aa15.36■□□□□ 0.05
CHMP4C-201ENST00000297265 GMPSP49915 693 aaPredicted RBP15.36■□□□□ 0.05
CHMP4C-201ENST00000297265 FANCCQ00597 558 aa15.36■□□□□ 0.05
CHMP4C-201ENST00000297265 LRMPQ12912 555 aa15.36■□□□□ 0.05
CHMP4C-201ENST00000297265 ARID5BQ14865 1188 aa15.36■□□□□ 0.05
CHMP4C-201ENST00000297265 DRC7Q8IY82 874 aa15.36■□□□□ 0.05
CHMP4C-201ENST00000297265 CACTINQ8WUQ7 758 aaKnown RBP15.36■□□□□ 0.05
CHMP4C-201ENST00000297265 DPF2Q92785 391 aa15.36■□□□□ 0.05
CHMP4C-201ENST00000297265 HAS1Q92839 578 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms