RNA–Protein interactions for RNA: ENST00000296215.7

SNIP1-201, Transcript of Smad nuclear interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNIP1, Length 4,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-201ENST00000296215 ATP6V0A2Q9Y487 856 aa12.82□□□□□ -0.36
SNIP1-201ENST00000296215 MYCLP1P12525 358 aaPredicted RBP12.82□□□□□ -0.36
SNIP1-201ENST00000296215 KRT13P13646 458 aa12.82□□□□□ -0.36
SNIP1-201ENST00000296215 NQO1P15559 274 aaKnown RBP12.82□□□□□ -0.36
SNIP1-201ENST00000296215 SERPINB6P35237 376 aa12.82□□□□□ -0.36
SNIP1-201ENST00000296215 AMPHP49418 695 aa12.82□□□□□ -0.36
SNIP1-201ENST00000296215 VPS36Q86VN1 386 aa12.82□□□□□ -0.36
SNIP1-201ENST00000296215 CNBD1Q8NA66 436 aa12.82□□□□□ -0.36
SNIP1-201ENST00000296215 THAP11Q96EK4 314 aa12.82□□□□□ -0.36
SNIP1-201ENST00000296215 TSG101Q99816 390 aa12.82□□□□□ -0.36
SNIP1-201ENST00000296215 EHD4Q9H223 541 aa12.82□□□□□ -0.36
SNIP1-201ENST00000296215 AASDHPPTQ9NRN7 309 aa12.82□□□□□ -0.36
SNIP1-201ENST00000296215 SOWAHDA6NJG2 315 aa12.81□□□□□ -0.36
SNIP1-201ENST00000296215 GOLGA8CPA6NN73 597 aa12.81□□□□□ -0.36
SNIP1-201ENST00000296215 ZSCAN9O15535 394 aaPredicted RBP12.81□□□□□ -0.36
SNIP1-201ENST00000296215 ELF3P78545 371 aaPredicted RBP12.81□□□□□ -0.36
SNIP1-201ENST00000296215 TRIM67Q6ZTA4 783 aa12.81□□□□□ -0.36
SNIP1-201ENST00000296215 TRPM8Q7Z2W7 1104 aa12.81□□□□□ -0.36
SNIP1-201ENST00000296215 VSTM4Q8IW00 320 aa12.81□□□□□ -0.36
SNIP1-201ENST00000296215 FBXO2Q9UK22 296 aaPredicted RBP12.81□□□□□ -0.36
SNIP1-201ENST00000296215 MTMR7Q9Y216 660 aa12.81□□□□□ -0.36
SNIP1-201ENST00000296215 PHF20L1A8MW92 1017 aa12.81□□□□□ -0.36
SNIP1-201ENST00000296215 GLRX3O76003 335 aaKnown RBP12.81□□□□□ -0.36
SNIP1-201ENST00000296215 TUBA4AP68366 448 aa12.81□□□□□ -0.36
SNIP1-201ENST00000296215 LMNB2Q03252 620 aa12.81□□□□□ -0.36
SNIP1-201ENST00000296215 TBC1D25Q3MII6 688 aa12.81□□□□□ -0.36
SNIP1-201ENST00000296215 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.81□□□□□ -0.36
SNIP1-201ENST00000296215 FAM129AQ9BZQ8 928 aa12.81□□□□□ -0.36
SNIP1-201ENST00000296215 DCTPP1Q9H773 170 aa12.81□□□□□ -0.36
SNIP1-201ENST00000296215 GID8Q9NWU2 228 aa12.81□□□□□ -0.36
SNIP1-201ENST00000296215 TOP2AP11388 1531 aaKnown RBP12.81□□□□□ -0.36
SNIP1-201ENST00000296215 LONP1P36776 959 aaKnown RBP12.81□□□□□ -0.36
SNIP1-201ENST00000296215 VHLP40337 213 aa12.81□□□□□ -0.36
SNIP1-201ENST00000296215 SESTD1Q86VW0 696 aa12.81□□□□□ -0.36
SNIP1-201ENST00000296215 RTEL1Q9NZ71 1219 aa12.81□□□□□ -0.36
SNIP1-201ENST00000296215 TSKSQ9UJT2 592 aa12.81□□□□□ -0.36
SNIP1-201ENST00000296215 SSX2IPQ9Y2D8 614 aa12.81□□□□□ -0.36
SNIP1-201ENST00000296215 FGD6Q6ZV73 1430 aa12.81□□□□□ -0.36
SNIP1-201ENST00000296215 NCOA3Q9Y6Q9 1424 aa12.81□□□□□ -0.36
SNIP1-201ENST00000296215 AP5Z1O43299 807 aa12.81□□□□□ -0.36
SNIP1-201ENST00000296215 CCT4P50991 539 aaKnown RBP12.81□□□□□ -0.36
SNIP1-201ENST00000296215 C9orf78Q9NZ63 289 aaPredicted RBP12.81□□□□□ -0.36
SNIP1-201ENST00000296215 TRAF3IP3Q9Y228 551 aa12.81□□□□□ -0.36
SNIP1-201ENST00000296215 WIZO95785 1651 aa12.8□□□□□ -0.36
SNIP1-201ENST00000296215 CHMLP26374 656 aa12.8□□□□□ -0.36
SNIP1-201ENST00000296215 DPCR1Q3MIW9 517 aa12.8□□□□□ -0.36
SNIP1-201ENST00000296215 VPS16Q9H269 839 aa12.8□□□□□ -0.36
SNIP1-201ENST00000296215 HOMER2Q9NSB8 354 aa12.8□□□□□ -0.36
SNIP1-201ENST00000296215 ZRANB1Q9UGI0 708 aa12.8□□□□□ -0.36
SNIP1-201ENST00000296215 NFU1Q9UMS0 254 aa12.8□□□□□ -0.36
SNIP1-201ENST00000296215 MAP3K5Q99683 1374 aa12.8□□□□□ -0.36
SNIP1-201ENST00000296215 DPPA5A6NC42 116 aa12.8□□□□□ -0.36
SNIP1-201ENST00000296215 SMNDC1O75940 238 aaKnown RBP eCLIP12.8□□□□□ -0.36
SNIP1-201ENST00000296215 STAT6P42226 847 aa12.8□□□□□ -0.36
SNIP1-201ENST00000296215 MED21Q13503 144 aa12.8□□□□□ -0.36
SNIP1-201ENST00000296215 CWF19L2Q2TBE0 894 aaKnown RBP12.8□□□□□ -0.36
SNIP1-201ENST00000296215 RRAGBQ5VZM2 374 aa12.8□□□□□ -0.36
SNIP1-201ENST00000296215 IRGCQ6NXR0 463 aa12.8□□□□□ -0.36
SNIP1-201ENST00000296215 RSRC2Q7L4I2 434 aaKnown RBP12.8□□□□□ -0.36
SNIP1-201ENST00000296215 CCDC138Q96M89 665 aa12.8□□□□□ -0.36
SNIP1-201ENST00000296215 TAF1DQ9H5J8 278 aaPredicted RBP12.8□□□□□ -0.36
SNIP1-201ENST00000296215 CEP126Q9P2H0 1117 aa12.8□□□□□ -0.36
SNIP1-201ENST00000296215 GGT7Q9UJ14 662 aa12.8□□□□□ -0.36
SNIP1-201ENST00000296215 HFM1A2PYH4 1435 aa12.8□□□□□ -0.36
SNIP1-201ENST00000296215 KRT8P05787 483 aa12.8□□□□□ -0.36
SNIP1-201ENST00000296215 DHX9Q08211 1270 aaKnown RBP12.8□□□□□ -0.36
SNIP1-201ENST00000296215 SFMBT2Q5VUG0 894 aa12.8□□□□□ -0.36
SNIP1-201ENST00000296215 C1orf228Q6PIY5 440 aa12.8□□□□□ -0.36
SNIP1-201ENST00000296215 MTHFD1LQ6UB35 978 aa12.8□□□□□ -0.36
SNIP1-201ENST00000296215 PPP1R14CQ8TAE6 165 aa12.8□□□□□ -0.36
SNIP1-201ENST00000296215 AGAP11Q8TF27 550 aa12.8□□□□□ -0.36
SNIP1-201ENST00000296215 LENG1Q96BZ8 264 aaPredicted RBP12.8□□□□□ -0.36
SNIP1-201ENST00000296215 NOX5Q96PH1 765 aa12.8□□□□□ -0.36
SNIP1-201ENST00000296215 EPN1Q9Y6I3 576 aaPredicted RBP12.8□□□□□ -0.36
SNIP1-201ENST00000296215 WDR91A4D1P6 747 aa12.79□□□□□ -0.36
SNIP1-201ENST00000296215 CAPN15O75808 1086 aa12.79□□□□□ -0.36
SNIP1-201ENST00000296215 RALGDSQ12967 914 aa12.79□□□□□ -0.36
SNIP1-201ENST00000296215 C6orf183Q5T699 404 aa12.79□□□□□ -0.36
SNIP1-201ENST00000296215 LRRC8BQ6P9F7 803 aa12.79□□□□□ -0.36
SNIP1-201ENST00000296215 TUBA3EQ6PEY2 450 aa12.79□□□□□ -0.36
SNIP1-201ENST00000296215 RSPH3Q86UC2 560 aa12.79□□□□□ -0.36
SNIP1-201ENST00000296215 RETREG2Q8NC44 543 aa12.79□□□□□ -0.36
SNIP1-201ENST00000296215 ERMNQ8TAM6 284 aa12.79□□□□□ -0.36
SNIP1-201ENST00000296215 DHRS1Q96LJ7 313 aa12.79□□□□□ -0.36
SNIP1-201ENST00000296215 COMMD3-BMI1R4GMX3 469 aa12.79□□□□□ -0.36
SNIP1-201ENST00000296215 KAT6BQ8WYB5 2073 aa12.79□□□□□ -0.36
SNIP1-201ENST00000296215 HSPA1AP0DMV8 641 aaKnown RBP12.79□□□□□ -0.36
SNIP1-201ENST00000296215 HSPA1BP0DMV9 641 aaKnown RBP12.79□□□□□ -0.36
SNIP1-201ENST00000296215 HSPA8P11142 646 aaKnown RBP12.79□□□□□ -0.36
SNIP1-201ENST00000296215 EEF1DP29692 281 aaKnown RBP12.79□□□□□ -0.36
SNIP1-201ENST00000296215 KRT76Q01546 638 aa12.79□□□□□ -0.36
SNIP1-201ENST00000296215 GRAMD1BQ3KR37 738 aa12.79□□□□□ -0.36
SNIP1-201ENST00000296215 CEP78Q5JTW2 689 aa12.79□□□□□ -0.36
SNIP1-201ENST00000296215 HDGFL2Q7Z4V5 671 aaPredicted RBP12.79□□□□□ -0.36
SNIP1-201ENST00000296215 SAMD3Q8N6K7 520 aa12.79□□□□□ -0.36
SNIP1-201ENST00000296215 MLKLQ8NB16 471 aa12.79□□□□□ -0.36
SNIP1-201ENST00000296215 RPAP3Q9H6T3 665 aaPredicted RBP12.79□□□□□ -0.36
SNIP1-201ENST00000296215 DBNLQ9UJU6 430 aaKnown RBP12.79□□□□□ -0.36
SNIP1-201ENST00000296215 CROTQ9UKG9 612 aa12.79□□□□□ -0.36
SNIP1-201ENST00000296215 MAGOHP61326 146 aaKnown RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms