RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 ZNF112Q9UJU3 913 aa10.38□□□□□ -0.75
PDPN-201ENST00000294489 RBBP6Q7Z6E9 1792 aaKnown RBP10.38□□□□□ -0.75
PDPN-201ENST00000294489 SLFN14P0C7P3 912 aa10.38□□□□□ -0.75
PDPN-201ENST00000294489 TXLNAP40222 546 aa10.38□□□□□ -0.75
PDPN-201ENST00000294489 MYL5Q02045 173 aa10.38□□□□□ -0.75
PDPN-201ENST00000294489 CCDC96Q2M329 555 aa10.38□□□□□ -0.75
PDPN-201ENST00000294489 KIAA1755Q5JYT7 1200 aa10.38□□□□□ -0.75
PDPN-201ENST00000294489 NT5DC1Q5TFE4 455 aa10.38□□□□□ -0.75
PDPN-201ENST00000294489 HACL1Q9UJ83 578 aa10.38□□□□□ -0.75
PDPN-201ENST00000294489 FOXN1O15353 648 aa10.37□□□□□ -0.75
PDPN-201ENST00000294489 OFD1O75665 1012 aa10.37□□□□□ -0.75
PDPN-201ENST00000294489 BMP3P12645 472 aa10.37□□□□□ -0.75
PDPN-201ENST00000294489 LONP1P36776 959 aaKnown RBP10.37□□□□□ -0.75
PDPN-201ENST00000294489 ADCY7P51828 1080 aa10.37□□□□□ -0.75
PDPN-201ENST00000294489 ATP2B2Q01814 1243 aa10.37□□□□□ -0.75
PDPN-201ENST00000294489 SAMD7Q7Z3H4 446 aa10.37□□□□□ -0.75
PDPN-201ENST00000294489 GLT8D2Q9H1C3 349 aa10.37□□□□□ -0.75
PDPN-201ENST00000294489 WDR90Q96KV7 1748 aa10.37□□□□□ -0.75
PDPN-201ENST00000294489 PTGS1P23219 599 aa10.37□□□□□ -0.75
PDPN-201ENST00000294489 SLC16A2P36021 539 aa10.37□□□□□ -0.75
PDPN-201ENST00000294489 NONOQ15233 471 aaKnown RBP eCLIP10.37□□□□□ -0.75
PDPN-201ENST00000294489 QRICH1Q2TAL8 776 aa10.37□□□□□ -0.75
PDPN-201ENST00000294489 REXO1Q8N1G1 1221 aaKnown RBP10.37□□□□□ -0.75
PDPN-201ENST00000294489 IQUBQ8NA54 791 aa10.37□□□□□ -0.75
PDPN-201ENST00000294489 MLKLQ8NB16 471 aa10.37□□□□□ -0.75
PDPN-201ENST00000294489 COA7Q96BR5 231 aa10.37□□□□□ -0.75
PDPN-201ENST00000294489 GOPCQ9HD26 462 aa10.37□□□□□ -0.75
PDPN-201ENST00000294489 MAN1B1Q9UKM7 699 aa10.37□□□□□ -0.75
PDPN-201ENST00000294489 PPP2R3BQ9Y5P8 575 aa10.37□□□□□ -0.75
PDPN-201ENST00000294489 RLFQ13129 1914 aa10.37□□□□□ -0.75
PDPN-201ENST00000294489 ASTN2O75129 1339 aaPredicted RBP10.36□□□□□ -0.75
PDPN-201ENST00000294489 ASNSP08243 561 aa10.36□□□□□ -0.75
PDPN-201ENST00000294489 SARSP49591 514 aaKnown RBP10.36□□□□□ -0.75
PDPN-201ENST00000294489 INF2Q27J81 1249 aa10.36□□□□□ -0.75
PDPN-201ENST00000294489 SYDE2Q5VT97 1194 aa10.36□□□□□ -0.75
PDPN-201ENST00000294489 DTHD1Q6ZMT9 781 aa10.36□□□□□ -0.75
PDPN-201ENST00000294489 SH3RF1Q7Z6J0 888 aa10.36□□□□□ -0.75
PDPN-201ENST00000294489 APOBEC3FQ8IUX4 373 aaKnown RBP10.36□□□□□ -0.75
PDPN-201ENST00000294489 ACER1Q8TDN7 264 aa10.36□□□□□ -0.75
PDPN-201ENST00000294489 VCPKMTQ9H867 229 aa10.36□□□□□ -0.75
PDPN-201ENST00000294489 SSC5DA1L4H1 1573 aa10.36□□□□□ -0.75
PDPN-201ENST00000294489 PITPNM2Q9BZ72 1349 aa10.36□□□□□ -0.75
PDPN-201ENST00000294489 CTNND1O60716 968 aaKnown RBP10.36□□□□□ -0.75
PDPN-201ENST00000294489 ECE1P42892 770 aa10.36□□□□□ -0.75
PDPN-201ENST00000294489 NCAPHQ15003 741 aa10.36□□□□□ -0.75
PDPN-201ENST00000294489 SPATA20Q8TB22 786 aa10.36□□□□□ -0.75
PDPN-201ENST00000294489 GJA3Q9Y6H8 435 aa10.36□□□□□ -0.75
PDPN-201ENST00000294489 H7C1D1 291 aa10.36□□□□□ -0.75
PDPN-201ENST00000294489 PRR29P0C7W0 189 aa10.36□□□□□ -0.75
PDPN-201ENST00000294489 CDC37Q16543 378 aaPredicted RBP10.36□□□□□ -0.75
PDPN-201ENST00000294489 TBC1D10BQ4KMP7 808 aaPredicted RBP10.36□□□□□ -0.75
PDPN-201ENST00000294489 MCTP2Q6DN12 878 aa10.36□□□□□ -0.75
PDPN-201ENST00000294489 CRYGNQ8WXF5 182 aa10.36□□□□□ -0.75
PDPN-201ENST00000294489 PAGE5Q96GU1 130 aa10.36□□□□□ -0.75
PDPN-201ENST00000294489 KCNF1Q9H3M0 494 aa10.36□□□□□ -0.75
PDPN-201ENST00000294489 SH2D4AQ9H788 454 aa10.36□□□□□ -0.75
PDPN-201ENST00000294489 LOC285556D6RIA3 1793 aa10.35□□□□□ -0.75
PDPN-201ENST00000294489 OTOFQ9HC10 1997 aa10.35□□□□□ -0.75
PDPN-201ENST00000294489 GOLGB1Q14789 3259 aaKnown RBP10.35□□□□□ -0.75
PDPN-201ENST00000294489 POLR2AP24928 1970 aaKnown RBP10.35□□□□□ -0.75
PDPN-201ENST00000294489 A0A087X0B3 334 aa10.35□□□□□ -0.75
PDPN-201ENST00000294489 LMOD1P29536 600 aaPredicted RBP10.35□□□□□ -0.75
PDPN-201ENST00000294489 AFMP43652 599 aa10.35□□□□□ -0.75
PDPN-201ENST00000294489 MORC3Q14149 939 aa10.35□□□□□ -0.75
PDPN-201ENST00000294489 NOLC1Q14978 699 aaKnown RBP eCLIP10.35□□□□□ -0.75
PDPN-201ENST00000294489 E2F4Q16254 413 aa10.35□□□□□ -0.75
PDPN-201ENST00000294489 ARHGAP27Q6ZUM4 889 aa10.35□□□□□ -0.75
PDPN-201ENST00000294489 MIGA2Q7L4E1 593 aa10.35□□□□□ -0.75
PDPN-201ENST00000294489 NEK8Q86SG6 692 aa10.35□□□□□ -0.75
PDPN-201ENST00000294489 GRAMD1CQ8IYS0 662 aa10.35□□□□□ -0.75
PDPN-201ENST00000294489 CUL5Q93034 780 aa10.35□□□□□ -0.75
PDPN-201ENST00000294489 SYT17Q9BSW7 474 aa10.35□□□□□ -0.75
PDPN-201ENST00000294489 DEFB129Q9H1M3 183 aa10.35□□□□□ -0.75
PDPN-201ENST00000294489 NRBP1Q9UHY1 535 aa10.35□□□□□ -0.75
PDPN-201ENST00000294489 NEMFO60524 1076 aa10.35□□□□□ -0.75
PDPN-201ENST00000294489 TRPM4Q8TD43 1214 aa10.35□□□□□ -0.75
PDPN-201ENST00000294489 NAP1L5Q96NT1 182 aaPredicted RBP10.35□□□□□ -0.75
PDPN-201ENST00000294489 RANBP17Q9H2T7 1088 aaKnown RBP10.35□□□□□ -0.75
PDPN-201ENST00000294489 TMEM260Q9NX78 707 aa10.35□□□□□ -0.75
PDPN-201ENST00000294489 MRPL12P52815 198 aaKnown RBP10.34□□□□□ -0.75
PDPN-201ENST00000294489 HIRAP54198 1017 aaPredicted RBP10.34□□□□□ -0.75
PDPN-201ENST00000294489 CT47A1Q5JQC4 288 aaPredicted RBP10.34□□□□□ -0.75
PDPN-201ENST00000294489 PPP4R3AQ6IN85 833 aa10.34□□□□□ -0.75
PDPN-201ENST00000294489 KIAA1524Q8TCG1 905 aa10.34□□□□□ -0.75
PDPN-201ENST00000294489 TBCKQ8TEA7 893 aa10.34□□□□□ -0.75
PDPN-201ENST00000294489 HOOK2Q96ED9 719 aa10.34□□□□□ -0.75
PDPN-201ENST00000294489 MBOAT7Q96N66 472 aa10.34□□□□□ -0.75
PDPN-201ENST00000294489 GSDMAQ96QA5 445 aa10.34□□□□□ -0.75
PDPN-201ENST00000294489 MTMR9Q96QG7 549 aa10.34□□□□□ -0.75
PDPN-201ENST00000294489 NUP88Q99567 741 aaPredicted RBP10.34□□□□□ -0.75
PDPN-201ENST00000294489 TMEM60Q9H2L4 133 aa10.34□□□□□ -0.75
PDPN-201ENST00000294489 IFNKQ9P0W0 207 aa10.34□□□□□ -0.75
PDPN-201ENST00000294489 PRR12Q9ULL5 1215 aa10.34□□□□□ -0.75
PDPN-201ENST00000294489 TMEM232C9JQI7 657 aa10.34□□□□□ -0.75
PDPN-201ENST00000294489 PIK3CDO00329 1044 aa10.34□□□□□ -0.75
PDPN-201ENST00000294489 CBFA2T2O43439 604 aa10.34□□□□□ -0.75
PDPN-201ENST00000294489 YBX3P16989 372 aaKnown RBP eCLIP10.34□□□□□ -0.75
PDPN-201ENST00000294489 BMP6P22004 513 aa10.34□□□□□ -0.75
PDPN-201ENST00000294489 LETM2Q2VYF4 491 aa10.34□□□□□ -0.75
PDPN-201ENST00000294489 FAM160B2Q86V87 743 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms