RNA–Protein interactions for RNA: ENST00000289272.2

PCDHA13-201, Transcript of protocadherin alpha 13, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHA13, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-201ENST00000289272 KCNK3O14649 394 aa19.2■□□□□ 0.66
PCDHA13-201ENST00000289272 ATP2B4P23634 1241 aa19.2■□□□□ 0.66
PCDHA13-201ENST00000289272 NECTIN1Q15223 517 aa19.2■□□□□ 0.66
PCDHA13-201ENST00000289272 DPCR1Q3MIW9 517 aa19.2■□□□□ 0.66
PCDHA13-201ENST00000289272 LINC00301Q8NCQ3 95 aa19.2■□□□□ 0.66
PCDHA13-201ENST00000289272 LRRC7Q96NW7 1537 aa19.2■□□□□ 0.66
PCDHA13-201ENST00000289272 GUCY2DQ02846 1103 aa19.2■□□□□ 0.66
PCDHA13-201ENST00000289272 LARGE2Q8N3Y3 721 aa19.2■□□□□ 0.66
PCDHA13-201ENST00000289272 BATF3Q9NR55 127 aa19.2■□□□□ 0.66
PCDHA13-201ENST00000289272 MAP3K15Q6ZN16 1313 aa19.2■□□□□ 0.66
PCDHA13-201ENST00000289272 IRX1P78414 480 aaPredicted RBP19.2■□□□□ 0.66
PCDHA13-201ENST00000289272 FANCBQ8NB91 859 aa19.2■□□□□ 0.66
PCDHA13-201ENST00000289272 PASKQ96RG2 1323 aa19.2■□□□□ 0.66
PCDHA13-201ENST00000289272 MYCNP04198 464 aaPredicted RBP19.2■□□□□ 0.66
PCDHA13-201ENST00000289272 PCP11498 1178 aaKnown RBP19.2■□□□□ 0.66
PCDHA13-201ENST00000289272 PLS1Q14651 629 aa19.2■□□□□ 0.66
PCDHA13-201ENST00000289272 TRIM68Q6AZZ1 485 aa19.2■□□□□ 0.66
PCDHA13-201ENST00000289272 TMC4Q7Z404 712 aa19.2■□□□□ 0.66
PCDHA13-201ENST00000289272 EXOC7Q9UPT5 735 aa19.2■□□□□ 0.66
PCDHA13-201ENST00000289272 CARMIL3Q8ND23 1372 aa19.19■□□□□ 0.66
PCDHA13-201ENST00000289272 TARSL2A2RTX5 802 aaKnown RBP19.19■□□□□ 0.66
PCDHA13-201ENST00000289272 PPP1R21Q6ZMI0 780 aa19.19■□□□□ 0.66
PCDHA13-201ENST00000289272 GABPB2Q8TAK5 448 aaPredicted RBP19.19■□□□□ 0.66
PCDHA13-201ENST00000289272 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.19■□□□□ 0.66
PCDHA13-201ENST00000289272 GDAP1L1Q96MZ0 367 aa19.19■□□□□ 0.66
PCDHA13-201ENST00000289272 PUS3Q9BZE2 481 aaKnown RBP19.19■□□□□ 0.66
PCDHA13-201ENST00000289272 SASH1O94885 1247 aa19.19■□□□□ 0.66
PCDHA13-201ENST00000289272 TRIM31Q9BZY9 425 aa19.19■□□□□ 0.66
PCDHA13-201ENST00000289272 TRPC5Q9UL62 973 aaPredicted RBP19.19■□□□□ 0.66
PCDHA13-201ENST00000289272 PCDHA5Q9Y5H7 936 aa19.19■□□□□ 0.66
PCDHA13-201ENST00000289272 PEX19P40855 299 aa19.19■□□□□ 0.66
PCDHA13-201ENST00000289272 ATG3Q9NT62 314 aa19.19■□□□□ 0.66
PCDHA13-201ENST00000289272 LRWD1Q9UFC0 647 aa19.19■□□□□ 0.66
PCDHA13-201ENST00000289272 PNMA2Q9UL42 364 aa19.19■□□□□ 0.66
PCDHA13-201ENST00000289272 CYP2E1P05181 493 aaPredicted RBP19.19■□□□□ 0.66
PCDHA13-201ENST00000289272 ZSCAN20P17040 1043 aaPredicted RBP19.19■□□□□ 0.66
PCDHA13-201ENST00000289272 ARHGEF18Q6ZSZ5 1173 aa19.19■□□□□ 0.66
PCDHA13-201ENST00000289272 TRIM42Q8IWZ5 723 aa19.19■□□□□ 0.66
PCDHA13-201ENST00000289272 SERPINA10Q9UK55 444 aa19.19■□□□□ 0.66
PCDHA13-201ENST00000289272 PPP1R9AQ9ULJ8 1098 aa19.19■□□□□ 0.66
PCDHA13-201ENST00000289272 CLIC4Q9Y696 253 aa19.19■□□□□ 0.66
PCDHA13-201ENST00000289272 ERBB3P21860 1342 aa19.19■□□□□ 0.66
PCDHA13-201ENST00000289272 SART1O43290 800 aaKnown RBP19.18■□□□□ 0.66
PCDHA13-201ENST00000289272 RBL2Q08999 1139 aa19.18■□□□□ 0.66
PCDHA13-201ENST00000289272 SEPT14Q6ZU15 432 aa19.18■□□□□ 0.66
PCDHA13-201ENST00000289272 GPCPD1Q9NPB8 672 aa19.18■□□□□ 0.66
PCDHA13-201ENST00000289272 RWDD2AQ9UIY3 292 aa19.18■□□□□ 0.66
PCDHA13-201ENST00000289272 PDE8BO95263 885 aa19.18■□□□□ 0.66
PCDHA13-201ENST00000289272 PTPN12Q05209 780 aaKnown RBP19.18■□□□□ 0.66
PCDHA13-201ENST00000289272 WDR44Q5JSH3 913 aa19.18■□□□□ 0.66
PCDHA13-201ENST00000289272 MAK16Q9BXY0 300 aaKnown RBP19.18■□□□□ 0.66
PCDHA13-201ENST00000289272 METTL14Q9HCE5 456 aaKnown RBP19.18■□□□□ 0.66
PCDHA13-201ENST00000289272 ZKSCAN7Q9P0L1 754 aaPredicted RBP19.18■□□□□ 0.66
PCDHA13-201ENST00000289272 POLR1AO95602 1720 aaPredicted RBP19.18■□□□□ 0.66
PCDHA13-201ENST00000289272 hCG_1642624A0A1W2PR95 340 aa19.18■□□□□ 0.66
PCDHA13-201ENST00000289272 CFAP73A6NFT4 308 aa19.18■□□□□ 0.66
PCDHA13-201ENST00000289272 RPN1P04843 607 aaKnown RBP19.18■□□□□ 0.66
PCDHA13-201ENST00000289272 TXKP42681 527 aa19.18■□□□□ 0.66
PCDHA13-201ENST00000289272 PSMC4P43686 418 aa19.18■□□□□ 0.66
PCDHA13-201ENST00000289272 NIM1KQ8IY84 436 aa19.18■□□□□ 0.66
PCDHA13-201ENST00000289272 SMC1BQ8NDV3 1235 aa19.18■□□□□ 0.66
PCDHA13-201ENST00000289272 CCDC97Q96F63 343 aaPredicted RBP19.18■□□□□ 0.66
PCDHA13-201ENST00000289272 ZSCAN10Q96SZ4 725 aaPredicted RBP19.18■□□□□ 0.66
PCDHA13-201ENST00000289272 LARGE1O95461 756 aa19.18■□□□□ 0.66
PCDHA13-201ENST00000289272 ADORA1P30542 326 aa19.18■□□□□ 0.66
PCDHA13-201ENST00000289272 ITIH3Q06033 890 aa19.18■□□□□ 0.66
PCDHA13-201ENST00000289272 CCDC13Q8IYE1 715 aa19.18■□□□□ 0.66
PCDHA13-201ENST00000289272 KLHL29Q96CT2 875 aa19.18■□□□□ 0.66
PCDHA13-201ENST00000289272 CALR3Q96L12 384 aaKnown RBP19.18■□□□□ 0.66
PCDHA13-201ENST00000289272 APBA3O96018 575 aa19.17■□□□□ 0.66
PCDHA13-201ENST00000289272 STAT1P42224 750 aa19.17■□□□□ 0.66
PCDHA13-201ENST00000289272 ALDH8A1Q9H2A2 487 aaPredicted RBP19.17■□□□□ 0.66
PCDHA13-201ENST00000289272 N4BP1O75113 896 aaKnown RBP19.17■□□□□ 0.66
PCDHA13-201ENST00000289272 HEXIM1O94992 359 aaKnown RBP19.17■□□□□ 0.66
PCDHA13-201ENST00000289272 TFAP4Q01664 338 aa19.17■□□□□ 0.66
PCDHA13-201ENST00000289272 SEMA3FQ13275 785 aa19.17■□□□□ 0.66
PCDHA13-201ENST00000289272 TAF11Q15544 211 aa19.17■□□□□ 0.66
PCDHA13-201ENST00000289272 ARHGAP18Q8N392 663 aa19.17■□□□□ 0.66
PCDHA13-201ENST00000289272 PPFIA2O75334 1257 aa19.17■□□□□ 0.66
PCDHA13-201ENST00000289272 DNAJC8O75937 253 aaPredicted RBP19.17■□□□□ 0.66
PCDHA13-201ENST00000289272 RNASE9P60153 205 aaKnown RBP19.17■□□□□ 0.66
PCDHA13-201ENST00000289272 THAP9Q9H5L6 903 aa19.17■□□□□ 0.66
PCDHA13-201ENST00000289272 WDR17Q8IZU2 1322 aa19.17■□□□□ 0.66
PCDHA13-201ENST00000289272 LMTK2Q8IWU2 1503 aa19.17■□□□□ 0.66
PCDHA13-201ENST00000289272 IL6STP40189 918 aaPredicted RBP19.17■□□□□ 0.66
PCDHA13-201ENST00000289272 DTNBP1Q96EV8 351 aa19.17■□□□□ 0.66
PCDHA13-201ENST00000289272 SH3GL3Q99963 347 aa19.17■□□□□ 0.66
PCDHA13-201ENST00000289272 GREM2Q9H772 168 aa19.17■□□□□ 0.66
PCDHA13-201ENST00000289272 PFDN1O60925 122 aa19.16■□□□□ 0.66
PCDHA13-201ENST00000289272 ZBED6P86452 979 aa19.16■□□□□ 0.66
PCDHA13-201ENST00000289272 TNFAIP1Q13829 316 aa19.16■□□□□ 0.66
PCDHA13-201ENST00000289272 TSC22D3Q99576 134 aa19.16■□□□□ 0.66
PCDHA13-201ENST00000289272 DIS3Q9Y2L1 958 aaKnown RBP19.16■□□□□ 0.66
PCDHA13-201ENST00000289272 TNKSO95271 1327 aa19.16■□□□□ 0.66
PCDHA13-201ENST00000289272 OPHN1O60890 802 aa19.16■□□□□ 0.66
PCDHA13-201ENST00000289272 H2AFZP0C0S5 128 aa19.16■□□□□ 0.66
PCDHA13-201ENST00000289272 LMNB2Q03252 620 aa19.16■□□□□ 0.66
PCDHA13-201ENST00000289272 H2AFVQ71UI9 128 aa19.16■□□□□ 0.66
PCDHA13-201ENST00000289272 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.16■□□□□ 0.66
PCDHA13-201ENST00000289272 ATP2A3Q93084 1043 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms