RNA–Protein interactions for RNA: ENST00000288839.6

SSX2B-201, Transcript of SSX family member 2B, humanhuman

TSL 3

Gene SSX2B, Length 801 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2B-201ENST00000288839 STAG2Q8N3U4 1231 aa7.98□□□□□ -1.13
SSX2B-201ENST00000288839 NUP133Q8WUM0 1156 aa7.98□□□□□ -1.13
SSX2B-201ENST00000288839 COA7Q96BR5 231 aa7.98□□□□□ -1.13
SSX2B-201ENST00000288839 TMEM87BQ96K49 555 aa7.98□□□□□ -1.13
SSX2B-201ENST00000288839 SLC38A10Q9HBR0 1119 aa7.98□□□□□ -1.13
SSX2B-201ENST00000288839 ZNF214Q9UL59 606 aaPredicted RBP7.98□□□□□ -1.13
SSX2B-201ENST00000288839 RIPK3Q9Y572 518 aa7.98□□□□□ -1.13
SSX2B-201ENST00000288839 COL11A1P12107 1806 aaPredicted RBP7.97□□□□□ -1.13
SSX2B-201ENST00000288839 CCDC69A6NI79 296 aa7.97□□□□□ -1.13
SSX2B-201ENST00000288839 EPB41L2O43491 1005 aaKnown RBP7.97□□□□□ -1.13
SSX2B-201ENST00000288839 PLA2G6O60733 806 aa7.97□□□□□ -1.13
SSX2B-201ENST00000288839 GNRH1P01148 92 aa7.97□□□□□ -1.13
SSX2B-201ENST00000288839 HMGB1P09429 215 aaKnown RBP7.97□□□□□ -1.13
SSX2B-201ENST00000288839 RPS6KB1P23443 525 aa7.97□□□□□ -1.13
SSX2B-201ENST00000288839 HOXD10P28358 340 aa7.97□□□□□ -1.13
SSX2B-201ENST00000288839 STAT3P40763 770 aa7.97□□□□□ -1.13
SSX2B-201ENST00000288839 TROAPQ12815 778 aa7.97□□□□□ -1.13
SSX2B-201ENST00000288839 GRM4Q14833 912 aa7.97□□□□□ -1.13
SSX2B-201ENST00000288839 SLC35G1Q2M3R5 365 aa7.97□□□□□ -1.13
SSX2B-201ENST00000288839 GPATCH4Q5T3I0 446 aaKnown RBP7.97□□□□□ -1.13
SSX2B-201ENST00000288839 RIOX2Q8IUF8 465 aa7.97□□□□□ -1.13
SSX2B-201ENST00000288839 CCDC144CPQ8IYA2 1237 aa7.97□□□□□ -1.13
SSX2B-201ENST00000288839 RAET1EQ8TD07 263 aa7.97□□□□□ -1.13
SSX2B-201ENST00000288839 AGBL1Q96MI9 1066 aa7.97□□□□□ -1.13
SSX2B-201ENST00000288839 MTA3Q9BTC8 594 aa7.97□□□□□ -1.13
SSX2B-201ENST00000288839 TEX13BQ9BXU2 312 aa7.97□□□□□ -1.13
SSX2B-201ENST00000288839 UPF3BQ9BZI7 483 aaKnown RBP7.97□□□□□ -1.13
SSX2B-201ENST00000288839 UNC93B1Q9H1C4 597 aa7.97□□□□□ -1.13
SSX2B-201ENST00000288839 ZSWIM6Q9HCJ5 1215 aa7.97□□□□□ -1.13
SSX2B-201ENST00000288839 VAT1LQ9HCJ6 419 aa7.97□□□□□ -1.13
SSX2B-201ENST00000288839 HOMER2Q9NSB8 354 aa7.97□□□□□ -1.13
SSX2B-201ENST00000288839 MAD2L2Q9UI95 211 aa7.97□□□□□ -1.13
SSX2B-201ENST00000288839 GJD2Q9UKL4 321 aa7.97□□□□□ -1.13
SSX2B-201ENST00000288839 BRPF3Q9ULD4 1205 aa7.97□□□□□ -1.13
SSX2B-201ENST00000288839 NAP1L2Q9ULW6 460 aaPredicted RBP7.97□□□□□ -1.13
SSX2B-201ENST00000288839 PCDHGA4Q9Y5G9 962 aa7.97□□□□□ -1.13
SSX2B-201ENST00000288839 ZNF536O15090 1300 aa7.97□□□□□ -1.13
SSX2B-201ENST00000288839 WDR19Q8NEZ3 1342 aa7.97□□□□□ -1.13
SSX2B-201ENST00000288839 PALM3A6NDB9 673 aaPredicted RBP7.96□□□□□ -1.14
SSX2B-201ENST00000288839 SLC15A5A6NIM6 579 aa7.96□□□□□ -1.14
SSX2B-201ENST00000288839 KLRF2D3W0D1 207 aa7.96□□□□□ -1.14
SSX2B-201ENST00000288839 ATP2A1O14983 1001 aa7.96□□□□□ -1.14
SSX2B-201ENST00000288839 DHX16O60231 1041 aaKnown RBP7.96□□□□□ -1.14
SSX2B-201ENST00000288839 DDAH1O94760 285 aa7.96□□□□□ -1.14
SSX2B-201ENST00000288839 SLC25A27O95847 323 aa7.96□□□□□ -1.14
SSX2B-201ENST00000288839 INHAP05111 366 aa7.96□□□□□ -1.14
SSX2B-201ENST00000288839 ALAS1P13196 640 aa7.96□□□□□ -1.14
SSX2B-201ENST00000288839 CYP2B6P20813 491 aa7.96□□□□□ -1.14
SSX2B-201ENST00000288839 PTPREP23469 700 aa7.96□□□□□ -1.14
SSX2B-201ENST00000288839 PSMA5P28066 241 aa7.96□□□□□ -1.14
SSX2B-201ENST00000288839 GRK4P32298 578 aa7.96□□□□□ -1.14
SSX2B-201ENST00000288839 LIFRP42702 1097 aa7.96□□□□□ -1.14
SSX2B-201ENST00000288839 FGD1P98174 961 aa7.96□□□□□ -1.14
SSX2B-201ENST00000288839 APOBRQ0VD83 1088 aa7.96□□□□□ -1.14
SSX2B-201ENST00000288839 VARS2Q5ST30 1063 aaKnown RBP7.96□□□□□ -1.14
SSX2B-201ENST00000288839 MORN1Q5T089 497 aa7.96□□□□□ -1.14
SSX2B-201ENST00000288839 APOA5Q6Q788 366 aa7.96□□□□□ -1.14
SSX2B-201ENST00000288839 Q6ZUG5 572 aa7.96□□□□□ -1.14
SSX2B-201ENST00000288839 NBPF11Q86T75 865 aa7.96□□□□□ -1.14
SSX2B-201ENST00000288839 MICU3Q86XE3 530 aa7.96□□□□□ -1.14
SSX2B-201ENST00000288839 ADGRF4Q8IZF3 695 aa7.96□□□□□ -1.14
SSX2B-201ENST00000288839 TMTC2Q8N394 836 aa7.96□□□□□ -1.14
SSX2B-201ENST00000288839 SPRYD3Q8NCJ5 442 aa7.96□□□□□ -1.14
SSX2B-201ENST00000288839 SHCBP1Q8NEM2 672 aa7.96□□□□□ -1.14
SSX2B-201ENST00000288839 PIBF1Q8WXW3 757 aa7.96□□□□□ -1.14
SSX2B-201ENST00000288839 MMP19Q99542 508 aa7.96□□□□□ -1.14
SSX2B-201ENST00000288839 NUDT12Q9BQG2 462 aa7.96□□□□□ -1.14
SSX2B-201ENST00000288839 LARP6Q9BRS8 491 aaKnown RBP7.96□□□□□ -1.14
SSX2B-201ENST00000288839 RANBP17Q9H2T7 1088 aaKnown RBP7.96□□□□□ -1.14
SSX2B-201ENST00000288839 CCPG1Q9ULG6 757 aa7.96□□□□□ -1.14
SSX2B-201ENST00000288839 SLC12A7Q9Y666 1083 aa7.96□□□□□ -1.14
SSX2B-201ENST00000288839 IVNS1ABPQ9Y6Y0 642 aa7.96□□□□□ -1.14
SSX2B-201ENST00000288839 KLF18A0A0U1RQI7 1052 aa7.95□□□□□ -1.14
SSX2B-201ENST00000288839 CYTH3O43739 400 aa7.95□□□□□ -1.14
SSX2B-201ENST00000288839 ADCY3O60266 1144 aa7.95□□□□□ -1.14
SSX2B-201ENST00000288839 COBLO75128 1261 aa7.95□□□□□ -1.14
SSX2B-201ENST00000288839 PLEKHA8P1O95397 391 aa7.95□□□□□ -1.14
SSX2B-201ENST00000288839 ICAM1P05362 532 aa7.95□□□□□ -1.14
SSX2B-201ENST00000288839 PGK2P07205 417 aa7.95□□□□□ -1.14
SSX2B-201ENST00000288839 FDX1P10109 184 aa7.95□□□□□ -1.14
SSX2B-201ENST00000288839 FCER1AP12319 257 aa7.95□□□□□ -1.14
SSX2B-201ENST00000288839 CCL5P13501 91 aa7.95□□□□□ -1.14
SSX2B-201ENST00000288839 ADORA2AP29274 412 aa7.95□□□□□ -1.14
SSX2B-201ENST00000288839 OAZ1P54368 228 aa7.95□□□□□ -1.14
SSX2B-201ENST00000288839 PRMT2P55345 433 aa7.95□□□□□ -1.14
SSX2B-201ENST00000288839 MAP2K5Q13163 448 aa7.95□□□□□ -1.14
SSX2B-201ENST00000288839 GRB14Q14449 540 aa7.95□□□□□ -1.14
SSX2B-201ENST00000288839 CDC37Q16543 378 aaPredicted RBP7.95□□□□□ -1.14
SSX2B-201ENST00000288839 CCL14Q16627 93 aa7.95□□□□□ -1.14
SSX2B-201ENST00000288839 USH1GQ495M9 461 aa7.95□□□□□ -1.14
SSX2B-201ENST00000288839 MUM1L1Q5H9M0 696 aa7.95□□□□□ -1.14
SSX2B-201ENST00000288839 PPP1R15BQ5SWA1 713 aa7.95□□□□□ -1.14
SSX2B-201ENST00000288839 SYNE3Q6ZMZ3 975 aa7.95□□□□□ -1.14
SSX2B-201ENST00000288839 RUFY3Q7L099 469 aa7.95□□□□□ -1.14
SSX2B-201ENST00000288839 SGMS1Q86VZ5 419 aa7.95□□□□□ -1.14
SSX2B-201ENST00000288839 CMTR1Q8N1G2 835 aaKnown RBP7.95□□□□□ -1.14
SSX2B-201ENST00000288839 CTCFLQ8NI51 663 aaPredicted RBP7.95□□□□□ -1.14
SSX2B-201ENST00000288839 NPLOC4Q8TAT6 608 aa7.95□□□□□ -1.14
SSX2B-201ENST00000288839 SOCS4Q8WXH5 440 aa7.95□□□□□ -1.14
SSX2B-201ENST00000288839 USP6NLQ92738 828 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms