RNA–Protein interactions for RNA: ENST00000288462.4

C9orf43-201, Transcript of chromosome 9 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf43, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-201ENST00000288462 ARHGEF10LQ9HCE6 1279 aa11.53□□□□□ -0.56
C9orf43-201ENST00000288462 DISC1Q9NRI5 854 aa11.53□□□□□ -0.56
C9orf43-201ENST00000288462 SHTN1A0MZ66 631 aa11.53□□□□□ -0.56
C9orf43-201ENST00000288462 BMP3P12645 472 aa11.53□□□□□ -0.56
C9orf43-201ENST00000288462 AFMP43652 599 aa11.53□□□□□ -0.56
C9orf43-201ENST00000288462 MRPL12P52815 198 aaKnown RBP11.53□□□□□ -0.56
C9orf43-201ENST00000288462 UBE2SQ16763 222 aa11.53□□□□□ -0.56
C9orf43-201ENST00000288462 NBPF9Q3BBW0 867 aa11.53□□□□□ -0.56
C9orf43-201ENST00000288462 CT47A1Q5JQC4 288 aaPredicted RBP11.53□□□□□ -0.56
C9orf43-201ENST00000288462 SYDE2Q5VT97 1194 aa11.53□□□□□ -0.56
C9orf43-201ENST00000288462 GSDMAQ96QA5 445 aa11.53□□□□□ -0.56
C9orf43-201ENST00000288462 MTMR9Q96QG7 549 aa11.53□□□□□ -0.56
C9orf43-201ENST00000288462 NUP88Q99567 741 aaPredicted RBP11.53□□□□□ -0.56
C9orf43-201ENST00000288462 MTRQ99707 1265 aa11.53□□□□□ -0.56
C9orf43-201ENST00000288462 TTC12Q9H892 705 aaPredicted RBP11.53□□□□□ -0.56
C9orf43-201ENST00000288462 TMX2Q9Y320 296 aa11.53□□□□□ -0.56
C9orf43-201ENST00000288462 GTPBP6O43824 516 aaPredicted RBP11.52□□□□□ -0.57
C9orf43-201ENST00000288462 KARSQ15046 597 aaKnown RBP11.52□□□□□ -0.57
C9orf43-201ENST00000288462 POTEDQ86YR6 584 aa11.52□□□□□ -0.57
C9orf43-201ENST00000288462 PSTPIP2Q9H939 334 aa11.52□□□□□ -0.57
C9orf43-201ENST00000288462 BCS1LQ9Y276 419 aa11.52□□□□□ -0.57
C9orf43-201ENST00000288462 PP2D1A8MPX8 630 aa11.51□□□□□ -0.57
C9orf43-201ENST00000288462 RAD21O60216 631 aa11.51□□□□□ -0.57
C9orf43-201ENST00000288462 STAT6P42226 847 aa11.51□□□□□ -0.57
C9orf43-201ENST00000288462 ECE1P42892 770 aa11.51□□□□□ -0.57
C9orf43-201ENST00000288462 TNNI2P48788 182 aa11.51□□□□□ -0.57
C9orf43-201ENST00000288462 PRELPP51888 382 aa11.51□□□□□ -0.57
C9orf43-201ENST00000288462 NAALADL2Q58DX5 795 aa11.51□□□□□ -0.57
C9orf43-201ENST00000288462 PPP4R3AQ6IN85 833 aa11.51□□□□□ -0.57
C9orf43-201ENST00000288462 IGSF22Q8N9C0 903 aa11.51□□□□□ -0.57
C9orf43-201ENST00000288462 ZNF830Q96NB3 372 aaPredicted RBP11.51□□□□□ -0.57
C9orf43-201ENST00000288462 PPP1R1BQ9UD71 204 aaPredicted RBP11.51□□□□□ -0.57
C9orf43-201ENST00000288462 DOCK1Q14185 1865 aa11.51□□□□□ -0.57
C9orf43-201ENST00000288462 SLC37A4O43826 429 aa11.51□□□□□ -0.57
C9orf43-201ENST00000288462 TDP2O95551 362 aa11.51□□□□□ -0.57
C9orf43-201ENST00000288462 PTGS1P23219 599 aa11.51□□□□□ -0.57
C9orf43-201ENST00000288462 ERCC5P28715 1186 aaPredicted RBP11.51□□□□□ -0.57
C9orf43-201ENST00000288462 CASP1P29466 404 aa11.51□□□□□ -0.57
C9orf43-201ENST00000288462 CDC25AP30304 524 aa11.51□□□□□ -0.57
C9orf43-201ENST00000288462 FXR2P51116 673 aaKnown RBP eCLIP11.51□□□□□ -0.57
C9orf43-201ENST00000288462 RASSF7Q02833 373 aa11.51□□□□□ -0.57
C9orf43-201ENST00000288462 FMR1Q06787 632 aaKnown RBP eCLIP11.51□□□□□ -0.57
C9orf43-201ENST00000288462 DRC7Q8IY82 874 aa11.51□□□□□ -0.57
C9orf43-201ENST00000288462 ENOX1Q8TC92 643 aaKnown RBP11.51□□□□□ -0.57
C9orf43-201ENST00000288462 ACER1Q8TDN7 264 aa11.51□□□□□ -0.57
C9orf43-201ENST00000288462 AMNQ9BXJ7 453 aa11.51□□□□□ -0.57
C9orf43-201ENST00000288462 MAGEF1Q9HAY2 307 aa11.51□□□□□ -0.57
C9orf43-201ENST00000288462 GOPCQ9HD26 462 aa11.51□□□□□ -0.57
C9orf43-201ENST00000288462 PCDHA1Q9Y5I3 950 aa11.51□□□□□ -0.57
C9orf43-201ENST00000288462 TMEM232C9JQI7 657 aa11.5□□□□□ -0.57
C9orf43-201ENST00000288462 FZD9O00144 591 aa11.5□□□□□ -0.57
C9orf43-201ENST00000288462 GCFC2P16383 781 aaKnown RBP11.5□□□□□ -0.57
C9orf43-201ENST00000288462 LMOD1P29536 600 aaPredicted RBP11.5□□□□□ -0.57
C9orf43-201ENST00000288462 CAP2P40123 477 aa11.5□□□□□ -0.57
C9orf43-201ENST00000288462 UBA7P41226 1012 aa11.5□□□□□ -0.57
C9orf43-201ENST00000288462 AP3B2Q13367 1082 aa11.5□□□□□ -0.57
C9orf43-201ENST00000288462 CALCRLQ16602 461 aa11.5□□□□□ -0.57
C9orf43-201ENST00000288462 CCDC144BQ3MJ40 725 aa11.5□□□□□ -0.57
C9orf43-201ENST00000288462 KIAA1755Q5JYT7 1200 aa11.5□□□□□ -0.57
C9orf43-201ENST00000288462 CCDC186Q7Z3E2 898 aa11.5□□□□□ -0.57
C9orf43-201ENST00000288462 DPF2Q92785 391 aa11.5□□□□□ -0.57
C9orf43-201ENST00000288462 TEPSINQ96N21 525 aa11.5□□□□□ -0.57
C9orf43-201ENST00000288462 NAP1L4Q99733 375 aaKnown RBP11.5□□□□□ -0.57
C9orf43-201ENST00000288462 CUEDC2Q9H467 287 aa11.5□□□□□ -0.57
C9orf43-201ENST00000288462 NRBP1Q9UHY1 535 aa11.5□□□□□ -0.57
C9orf43-201ENST00000288462 EGFRP00533 1210 aa11.5□□□□□ -0.57
C9orf43-201ENST00000288462 MYL1P05976 194 aa11.5□□□□□ -0.57
C9orf43-201ENST00000288462 ATP1A3P13637 1013 aa11.5□□□□□ -0.57
C9orf43-201ENST00000288462 GMPSP49915 693 aaPredicted RBP11.5□□□□□ -0.57
C9orf43-201ENST00000288462 FANCCQ00597 558 aa11.5□□□□□ -0.57
C9orf43-201ENST00000288462 CUL4BQ13620 913 aa11.5□□□□□ -0.57
C9orf43-201ENST00000288462 TNFAIP1Q13829 316 aa11.5□□□□□ -0.57
C9orf43-201ENST00000288462 RRAGBQ5VZM2 374 aa11.5□□□□□ -0.57
C9orf43-201ENST00000288462 MCTP2Q6DN12 878 aa11.5□□□□□ -0.57
C9orf43-201ENST00000288462 CABP7Q86V35 215 aa11.5□□□□□ -0.57
C9orf43-201ENST00000288462 FBXO11Q86XK2 927 aa11.5□□□□□ -0.57
C9orf43-201ENST00000288462 TEX2Q8IWB9 1127 aa11.5□□□□□ -0.57
C9orf43-201ENST00000288462 LRRC15Q8TF66 581 aa11.5□□□□□ -0.57
C9orf43-201ENST00000288462 MED15Q96RN5 788 aa11.5□□□□□ -0.57
C9orf43-201ENST00000288462 XPO4Q9C0E2 1151 aaKnown RBP11.5□□□□□ -0.57
C9orf43-201ENST00000288462 SH2D4AQ9H788 454 aa11.5□□□□□ -0.57
C9orf43-201ENST00000288462 VCPKMTQ9H867 229 aa11.5□□□□□ -0.57
C9orf43-201ENST00000288462 KBTBD4Q9NVX7 518 aa11.5□□□□□ -0.57
C9orf43-201ENST00000288462 IFNKQ9P0W0 207 aa11.5□□□□□ -0.57
C9orf43-201ENST00000288462 PRR12Q9ULL5 1215 aa11.5□□□□□ -0.57
C9orf43-201ENST00000288462 MEIS2O14770 477 aa11.49□□□□□ -0.57
C9orf43-201ENST00000288462 PLA2G6O60733 806 aa11.49□□□□□ -0.57
C9orf43-201ENST00000288462 ZNF18P17022 549 aa11.49□□□□□ -0.57
C9orf43-201ENST00000288462 STAT2P52630 851 aa11.49□□□□□ -0.57
C9orf43-201ENST00000288462 RASA3Q14644 834 aa11.49□□□□□ -0.57
C9orf43-201ENST00000288462 MIGA2Q7L4E1 593 aa11.49□□□□□ -0.57
C9orf43-201ENST00000288462 CRYGNQ8WXF5 182 aa11.49□□□□□ -0.57
C9orf43-201ENST00000288462 STAMQ92783 540 aa11.49□□□□□ -0.57
C9orf43-201ENST00000288462 MMTAG2Q9BU76 263 aaKnown RBP11.49□□□□□ -0.57
C9orf43-201ENST00000288462 ANO3Q9BYT9 981 aa11.49□□□□□ -0.57
C9orf43-201ENST00000288462 BLZF1Q9H2G9 400 aa11.49□□□□□ -0.57
C9orf43-201ENST00000288462 RBBP6Q7Z6E9 1792 aaKnown RBP11.49□□□□□ -0.57
C9orf43-201ENST00000288462 PHF20L1A8MW92 1017 aa11.48□□□□□ -0.57
C9orf43-201ENST00000288462 ASNSP08243 561 aa11.48□□□□□ -0.57
C9orf43-201ENST00000288462 CD44P16070 742 aaKnown RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms