RNA–Protein interactions for RNA: ENST00000284771.6

PDLIM3-203, Transcript of PDZ and LIM domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM3, Length 1,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-203ENST00000284771 SPATC1LQ9H0A9 340 aa25.1■■□□□ 1.61
PDLIM3-203ENST00000284771 ALAS1P13196 640 aa25.09■■□□□ 1.61
PDLIM3-203ENST00000284771 XBP1P17861 261 aa25.09■■□□□ 1.61
PDLIM3-203ENST00000284771 MAP2K2P36507 400 aa25.09■■□□□ 1.61
PDLIM3-203ENST00000284771 MUM1L1Q5H9M0 696 aa25.09■■□□□ 1.61
PDLIM3-203ENST00000284771 ANKRD13CQ8N6S4 541 aa25.09■■□□□ 1.61
PDLIM3-203ENST00000284771 CLEC4DQ8WXI8 215 aa25.09■■□□□ 1.61
PDLIM3-203ENST00000284771 TBC1D5Q92609 795 aa25.09■■□□□ 1.61
PDLIM3-203ENST00000284771 HOMER2Q9NSB8 354 aa25.09■■□□□ 1.61
PDLIM3-203ENST00000284771 VPS37CA5D8V6 355 aaPredicted RBP25.08■■□□□ 1.61
PDLIM3-203ENST00000284771 H3BQV1 296 aa25.08■■□□□ 1.61
PDLIM3-203ENST00000284771 NLRP5P59047 1200 aa25.08■■□□□ 1.61
PDLIM3-203ENST00000284771 IFFO2Q5TF58 517 aa25.08■■□□□ 1.61
PDLIM3-203ENST00000284771 ESYT2A0FGR8 921 aa25.07■■□□□ 1.6
PDLIM3-203ENST00000284771 BTBD18B2RXH4 712 aa25.07■■□□□ 1.6
PDLIM3-203ENST00000284771 GCLCP48506 637 aaPredicted RBP25.07■■□□□ 1.6
PDLIM3-203ENST00000284771 ERVK-9P63128 1117 aa25.07■■□□□ 1.6
PDLIM3-203ENST00000284771 ERVK-24P63145 666 aa25.07■■□□□ 1.6
PDLIM3-203ENST00000284771 TRIM29Q14134 588 aa25.07■■□□□ 1.6
PDLIM3-203ENST00000284771 PPP1R18Q6NYC8 613 aa25.07■■□□□ 1.6
PDLIM3-203ENST00000284771 RGS22Q8NE09 1264 aa25.07■■□□□ 1.6
PDLIM3-203ENST00000284771 TRERF1Q96PN7 1200 aa25.07■■□□□ 1.6
PDLIM3-203ENST00000284771 MOV10L1Q9BXT6 1211 aaKnown RBP25.07■■□□□ 1.6
PDLIM3-203ENST00000284771 ABCB11O95342 1321 aa25.07■■□□□ 1.6
PDLIM3-203ENST00000284771 KIF28PB7ZC32 967 aa25.07■■□□□ 1.6
PDLIM3-203ENST00000284771 M0R2N6 131 aa25.07■■□□□ 1.6
PDLIM3-203ENST00000284771 NFIBO00712 420 aa25.07■■□□□ 1.6
PDLIM3-203ENST00000284771 BRD1O95696 1058 aa25.07■■□□□ 1.6
PDLIM3-203ENST00000284771 CRHR2Q13324 411 aa25.07■■□□□ 1.6
PDLIM3-203ENST00000284771 RIOX2Q8IUF8 465 aa25.07■■□□□ 1.6
PDLIM3-203ENST00000284771 CCDC148Q8NFR7 591 aa25.07■■□□□ 1.6
PDLIM3-203ENST00000284771 CCDC12Q8WUD4 166 aaPredicted RBP25.07■■□□□ 1.6
PDLIM3-203ENST00000284771 MEIS2O14770 477 aa25.06■■□□□ 1.6
PDLIM3-203ENST00000284771 TLR2O60603 784 aa25.06■■□□□ 1.6
PDLIM3-203ENST00000284771 NR5A1Q13285 461 aa25.06■■□□□ 1.6
PDLIM3-203ENST00000284771 FOXD4L5Q5VV16 416 aaPredicted RBP25.06■■□□□ 1.6
PDLIM3-203ENST00000284771 REM2Q8IYK8 340 aaPredicted RBP25.06■■□□□ 1.6
PDLIM3-203ENST00000284771 GTF3C2Q8WUA4 911 aaPredicted RBP25.06■■□□□ 1.6
PDLIM3-203ENST00000284771 FOXD4L4Q8WXT5 416 aaPredicted RBP25.06■■□□□ 1.6
PDLIM3-203ENST00000284771 PSTPIP2Q9H939 334 aa25.06■■□□□ 1.6
PDLIM3-203ENST00000284771 RIC8AQ9NPQ8 531 aa25.06■■□□□ 1.6
PDLIM3-203ENST00000284771 MORF4L1Q9UBU8 362 aa25.06■■□□□ 1.6
PDLIM3-203ENST00000284771 CPA4Q9UI42 421 aa25.06■■□□□ 1.6
PDLIM3-203ENST00000284771 PCDHA4Q9UN74 947 aa25.06■■□□□ 1.6
PDLIM3-203ENST00000284771 MRPL11Q9Y3B7 192 aaKnown RBP25.06■■□□□ 1.6
PDLIM3-203ENST00000284771 CA12O43570 354 aa25.05■■□□□ 1.6
PDLIM3-203ENST00000284771 TRAF1Q13077 416 aa25.05■■□□□ 1.6
PDLIM3-203ENST00000284771 USP17L6PQ6QN14 398 aa25.05■■□□□ 1.6
PDLIM3-203ENST00000284771 FERMT3Q86UX7 667 aa25.05■■□□□ 1.6
PDLIM3-203ENST00000284771 DIS3L2Q8IYB7 885 aaKnown RBP25.05■■□□□ 1.6
PDLIM3-203ENST00000284771 FAM177A1Q8N128 213 aaPredicted RBP25.05■■□□□ 1.6
PDLIM3-203ENST00000284771 RNF146Q9NTX7 359 aa25.05■■□□□ 1.6
PDLIM3-203ENST00000284771 BCRP11274 1271 aa25.04■■□□□ 1.6
PDLIM3-203ENST00000284771 NOM1Q5C9Z4 860 aaKnown RBP25.04■■□□□ 1.6
PDLIM3-203ENST00000284771 C17orf99Q6UX52 265 aa25.04■■□□□ 1.6
PDLIM3-203ENST00000284771 DAGLBQ8NCG7 672 aa25.04■■□□□ 1.6
PDLIM3-203ENST00000284771 GPRC5AQ8NFJ5 357 aa25.04■■□□□ 1.6
PDLIM3-203ENST00000284771 RASGRP4Q8TDF6 673 aa25.04■■□□□ 1.6
PDLIM3-203ENST00000284771 PORCNQ9H237 461 aa25.04■■□□□ 1.6
PDLIM3-203ENST00000284771 C6orf50Q9HD87 102 aa25.04■■□□□ 1.6
PDLIM3-203ENST00000284771 PNMA2Q9UL42 364 aa25.04■■□□□ 1.6
PDLIM3-203ENST00000284771 CIZ1Q9ULV3 898 aaPredicted RBP25.04■■□□□ 1.6
PDLIM3-203ENST00000284771 THSD7BQ9C0I4 1608 aa25.04■■□□□ 1.6
PDLIM3-203ENST00000284771 ZSCAN22P10073 491 aaPredicted RBP25.04■■□□□ 1.6
PDLIM3-203ENST00000284771 GNA11P29992 359 aa25.04■■□□□ 1.6
PDLIM3-203ENST00000284771 EARS2Q5JPH6 523 aaKnown RBP25.04■■□□□ 1.6
PDLIM3-203ENST00000284771 BLIDQ8IZY5 108 aa25.04■■□□□ 1.6
PDLIM3-203ENST00000284771 TNFRSF25Q93038 417 aa25.04■■□□□ 1.6
PDLIM3-203ENST00000284771 ZFYVE28Q9HCC9 887 aa25.04■■□□□ 1.6
PDLIM3-203ENST00000284771 PDIA4P13667 645 aaKnown RBP25.03■■□□□ 1.6
PDLIM3-203ENST00000284771 ERCC3P19447 782 aa25.03■■□□□ 1.6
PDLIM3-203ENST00000284771 U2AF2P26368 475 aaKnown RBP eCLIP25.03■■□□□ 1.6
PDLIM3-203ENST00000284771 CALML3P27482 149 aa25.03■■□□□ 1.6
PDLIM3-203ENST00000284771 CLK2P49760 499 aaKnown RBP25.03■■□□□ 1.6
PDLIM3-203ENST00000284771 ADCY7P51828 1080 aa25.03■■□□□ 1.6
PDLIM3-203ENST00000284771 UBE2SQ16763 222 aa25.03■■□□□ 1.6
PDLIM3-203ENST00000284771 FAM110CQ1W6H9 321 aa25.03■■□□□ 1.6
PDLIM3-203ENST00000284771 MCTP1Q6DN14 999 aa25.03■■□□□ 1.6
PDLIM3-203ENST00000284771 CUL5Q93034 780 aa25.03■■□□□ 1.6
PDLIM3-203ENST00000284771 BIN2Q9UBW5 565 aaPredicted RBP25.03■■□□□ 1.6
PDLIM3-203ENST00000284771 PCDHA6Q9UN73 950 aa25.03■■□□□ 1.6
PDLIM3-203ENST00000284771 PCDHA8Q9Y5H6 950 aa25.03■■□□□ 1.6
PDLIM3-203ENST00000284771 ALDH1A1P00352 501 aa25.02■■□□□ 1.6
PDLIM3-203ENST00000284771 CFBP00751 764 aa25.02■■□□□ 1.6
PDLIM3-203ENST00000284771 HOXA13P31271 388 aaPredicted RBP25.02■■□□□ 1.6
PDLIM3-203ENST00000284771 KRT2P35908 639 aa25.02■■□□□ 1.6
PDLIM3-203ENST00000284771 GALNT17Q6IS24 598 aa25.02■■□□□ 1.6
PDLIM3-203ENST00000284771 EFCC1Q9HA90 598 aa25.02■■□□□ 1.6
PDLIM3-203ENST00000284771 TMEM260Q9NX78 707 aa25.02■■□□□ 1.6
PDLIM3-203ENST00000284771 CHMP5Q9NZZ3 219 aa25.02■■□□□ 1.6
PDLIM3-203ENST00000284771 MRPL12P52815 198 aaKnown RBP25.01■■□□□ 1.59
PDLIM3-203ENST00000284771 NUCB2P80303 420 aa25.01■■□□□ 1.59
PDLIM3-203ENST00000284771 TKFCQ3LXA3 575 aa25.01■■□□□ 1.59
PDLIM3-203ENST00000284771 NCAPG2Q86XI2 1143 aa25.01■■□□□ 1.59
PDLIM3-203ENST00000284771 RNF186Q9NXI6 227 aa25.01■■□□□ 1.59
PDLIM3-203ENST00000284771 GHRHRQ02643 423 aa25.01■■□□□ 1.59
PDLIM3-203ENST00000284771 RESTQ13127 1097 aa25.01■■□□□ 1.59
PDLIM3-203ENST00000284771 CHST13Q8NET6 341 aa25.01■■□□□ 1.59
PDLIM3-203ENST00000284771 FOXP1Q9H334 677 aaPredicted RBP25.01■■□□□ 1.59
PDLIM3-203ENST00000284771 ACAD9Q9H845 621 aa25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms