RNA–Protein interactions for RNA: ENST00000281171.8

PTPRO-201, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRO, Length 5,301 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-201ENST00000281171 PHACTR3Q96KR7 559 aa15.67■□□□□ 0.1
PTPRO-201ENST00000281171 EIF3HO15372 352 aaKnown RBP eCLIP15.66■□□□□ 0.1
PTPRO-201ENST00000281171 DCTN3O75935 186 aa15.66■□□□□ 0.1
PTPRO-201ENST00000281171 MFN1Q8IWA4 741 aa15.66■□□□□ 0.1
PTPRO-201ENST00000281171 FNBP4Q8N3X1 1017 aaPredicted RBP15.66■□□□□ 0.1
PTPRO-201ENST00000281171 HELBQ8NG08 1087 aaPredicted RBP15.66■□□□□ 0.1
PTPRO-201ENST00000281171 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.66■□□□□ 0.1
PTPRO-201ENST00000281171 RGL1Q9NZL6 768 aa15.66■□□□□ 0.1
PTPRO-201ENST00000281171 HARSP12081 509 aaKnown RBP15.66■□□□□ 0.1
PTPRO-201ENST00000281171 PDE6CP51160 858 aa15.66■□□□□ 0.1
PTPRO-201ENST00000281171 GJC2Q5T442 439 aaPredicted RBP15.66■□□□□ 0.1
PTPRO-201ENST00000281171 HAUS8Q9BT25 410 aa15.66■□□□□ 0.1
PTPRO-201ENST00000281171 CNGB3Q9NQW8 809 aa15.66■□□□□ 0.1
PTPRO-201ENST00000281171 TBC1D23Q9NUY8 699 aa15.66■□□□□ 0.1
PTPRO-201ENST00000281171 CLASP1Q7Z460 1538 aa15.66■□□□□ 0.1
PTPRO-201ENST00000281171 LMTK3Q96Q04 1460 aa15.66■□□□□ 0.1
PTPRO-201ENST00000281171 CPA1P15085 419 aa15.66■□□□□ 0.1
PTPRO-201ENST00000281171 INAQ16352 499 aa15.66■□□□□ 0.1
PTPRO-201ENST00000281171 HAUS3Q68CZ6 603 aa15.66■□□□□ 0.1
PTPRO-201ENST00000281171 CSGALNACT2Q8N6G5 542 aa15.66■□□□□ 0.1
PTPRO-201ENST00000281171 HIBADHP31937 336 aaKnown RBP15.66■□□□□ 0.1
PTPRO-201ENST00000281171 MAIP1Q8WWC4 291 aa15.66■□□□□ 0.1
PTPRO-201ENST00000281171 SLC40A1Q9NP59 571 aa15.66■□□□□ 0.1
PTPRO-201ENST00000281171 KCNK3O14649 394 aa15.65■□□□□ 0.1
PTPRO-201ENST00000281171 GNAT1P11488 350 aa15.65■□□□□ 0.1
PTPRO-201ENST00000281171 LMNB1P20700 586 aa15.65■□□□□ 0.1
PTPRO-201ENST00000281171 BEND3Q5T5X7 828 aa15.65■□□□□ 0.1
PTPRO-201ENST00000281171 TRIM42Q8IWZ5 723 aa15.65■□□□□ 0.1
PTPRO-201ENST00000281171 AFAP1L2Q8N4X5 818 aa15.65■□□□□ 0.1
PTPRO-201ENST00000281171 TSPYL6Q8N831 410 aa15.65■□□□□ 0.1
PTPRO-201ENST00000281171 FLAD1Q8NFF5 587 aa15.65■□□□□ 0.1
PTPRO-201ENST00000281171 DPH5Q9H2P9 285 aa15.65■□□□□ 0.1
PTPRO-201ENST00000281171 FAM135BQ49AJ0 1406 aa15.65■□□□□ 0.1
PTPRO-201ENST00000281171 FANCLQ9NW38 375 aa15.65■□□□□ 0.1
PTPRO-201ENST00000281171 MYOM2P54296 1465 aa15.65■□□□□ 0.1
PTPRO-201ENST00000281171 TRMT44Q8IYL2 757 aaKnown RBP15.65■□□□□ 0.1
PTPRO-201ENST00000281171 TMEM87AQ8NBN3 555 aa15.65■□□□□ 0.1
PTPRO-201ENST00000281171 ZNF483Q8TF39 744 aaPredicted RBP15.65■□□□□ 0.1
PTPRO-201ENST00000281171 KRT12Q99456 494 aa15.65■□□□□ 0.1
PTPRO-201ENST00000281171 ARHGEF10LQ9HCE6 1279 aa15.65■□□□□ 0.1
PTPRO-201ENST00000281171 CCDC87Q9NVE4 849 aa15.65■□□□□ 0.1
PTPRO-201ENST00000281171 PACSIN2Q9UNF0 486 aaPredicted RBP15.65■□□□□ 0.1
PTPRO-201ENST00000281171 ZNF189O75820 626 aaPredicted RBP15.65■□□□□ 0.1
PTPRO-201ENST00000281171 STRN3Q13033 797 aa15.65■□□□□ 0.1
PTPRO-201ENST00000281171 KBTBD3Q8NAB2 608 aa15.65■□□□□ 0.1
PTPRO-201ENST00000281171 PDZD8Q8NEN9 1154 aa15.65■□□□□ 0.1
PTPRO-201ENST00000281171 ATP6V0A1Q93050 837 aa15.65■□□□□ 0.1
PTPRO-201ENST00000281171 EPN3Q9H201 632 aa15.65■□□□□ 0.1
PTPRO-201ENST00000281171 PA2G4Q9UQ80 394 aaKnown RBP15.65■□□□□ 0.1
PTPRO-201ENST00000281171 IQCA1LA6NCM1 817 aa15.64■□□□□ 0.1
PTPRO-201ENST00000281171 POLR2DO15514 142 aaKnown RBP15.64■□□□□ 0.1
PTPRO-201ENST00000281171 DNAJC6O75061 913 aa15.64■□□□□ 0.1
PTPRO-201ENST00000281171 GJC1P36383 396 aa15.64■□□□□ 0.1
PTPRO-201ENST00000281171 CWF19L2Q2TBE0 894 aaKnown RBP15.64■□□□□ 0.1
PTPRO-201ENST00000281171 TRIML1Q8N9V2 468 aa15.64■□□□□ 0.1
PTPRO-201ENST00000281171 C8orf37Q96NL8 207 aa15.64■□□□□ 0.1
PTPRO-201ENST00000281171 BSDC1Q9NW68 430 aaPredicted RBP15.64■□□□□ 0.1
PTPRO-201ENST00000281171 COMMD10Q9Y6G5 202 aa15.64■□□□□ 0.1
PTPRO-201ENST00000281171 ENC1O14682 589 aa15.64■□□□□ 0.09
PTPRO-201ENST00000281171 CCDC14Q49A88 953 aa15.64■□□□□ 0.09
PTPRO-201ENST00000281171 TYW1BQ6NUM6 668 aa15.64■□□□□ 0.09
PTPRO-201ENST00000281171 HINFPQ9BQA5 517 aa15.64■□□□□ 0.09
PTPRO-201ENST00000281171 TFCP2L1Q9NZI6 479 aa15.64■□□□□ 0.09
PTPRO-201ENST00000281171 RGS12O14924 1447 aa15.64■□□□□ 0.09
PTPRO-201ENST00000281171 MYO1FO00160 1098 aa15.64■□□□□ 0.09
PTPRO-201ENST00000281171 NT5C2P49902 561 aa15.64■□□□□ 0.09
PTPRO-201ENST00000281171 TMTC3Q6ZXV5 915 aa15.64■□□□□ 0.09
PTPRO-201ENST00000281171 ACSBG1Q96GR2 724 aa15.64■□□□□ 0.09
PTPRO-201ENST00000281171 NUDCD1Q96RS6 583 aa15.64■□□□□ 0.09
PTPRO-201ENST00000281171 ECT2Q9H8V3 914 aa15.64■□□□□ 0.09
PTPRO-201ENST00000281171 ESRRBO95718 433 aa15.64■□□□□ 0.09
PTPRO-201ENST00000281171 SERPINB3P29508 390 aa15.64■□□□□ 0.09
PTPRO-201ENST00000281171 C2orf54Q08AI8 447 aa15.64■□□□□ 0.09
PTPRO-201ENST00000281171 ANKRD35Q8N283 1001 aa15.64■□□□□ 0.09
PTPRO-201ENST00000281171 SNRNP27Q8WVK2 155 aaKnown RBP15.64■□□□□ 0.09
PTPRO-201ENST00000281171 AMFRQ9UKV5 643 aa15.64■□□□□ 0.09
PTPRO-201ENST00000281171 ANGEL1Q9UNK9 670 aaKnown RBP15.64■□□□□ 0.09
PTPRO-201ENST00000281171 NSFL1CQ9UNZ2 370 aaKnown RBP15.64■□□□□ 0.09
PTPRO-201ENST00000281171 PSMC1P62191 440 aaKnown RBP15.64■□□□□ 0.09
PTPRO-201ENST00000281171 RCSD1Q6JBY9 416 aa15.64■□□□□ 0.09
PTPRO-201ENST00000281171 CLEC17AQ6ZS10 378 aa15.64■□□□□ 0.09
PTPRO-201ENST00000281171 MIEF2Q96C03 454 aa15.64■□□□□ 0.09
PTPRO-201ENST00000281171 DSCC1Q9BVC3 393 aa15.64■□□□□ 0.09
PTPRO-201ENST00000281171 MOV10L1Q9BXT6 1211 aaKnown RBP15.64■□□□□ 0.09
PTPRO-201ENST00000281171 STK32BQ9NY57 414 aa15.64■□□□□ 0.09
PTPRO-201ENST00000281171 PABPN1LA6NDY0 278 aaKnown RBP15.63■□□□□ 0.09
PTPRO-201ENST00000281171 BASP1P80723 227 aaKnown RBP15.63■□□□□ 0.09
PTPRO-201ENST00000281171 SFSWAPQ12872 951 aaKnown RBP15.63■□□□□ 0.09
PTPRO-201ENST00000281171 GRAMD1BQ3KR37 738 aa15.63■□□□□ 0.09
PTPRO-201ENST00000281171 SV2BQ7L1I2 683 aa15.63■□□□□ 0.09
PTPRO-201ENST00000281171 KIAA0825Q8IV33 1275 aa15.63■□□□□ 0.09
PTPRO-201ENST00000281171 CTAGE3PQ8IX95 158 aa15.63■□□□□ 0.09
PTPRO-201ENST00000281171 VPS37BQ9H9H4 285 aa15.63■□□□□ 0.09
PTPRO-201ENST00000281171 TYW1Q9NV66 732 aaKnown RBP15.63■□□□□ 0.09
PTPRO-201ENST00000281171 GGA1Q9UJY5 639 aa15.63■□□□□ 0.09
PTPRO-201ENST00000281171 TBC1D8O95759 1140 aa15.63■□□□□ 0.09
PTPRO-201ENST00000281171 ATP7BP35670 1465 aa15.63■□□□□ 0.09
PTPRO-201ENST00000281171 CHAMP1Q96JM3 812 aa15.63■□□□□ 0.09
PTPRO-201ENST00000281171 PARVBQ9HBI1 364 aa15.63■□□□□ 0.09
PTPRO-201ENST00000281171 MYO5CQ9NQX4 1742 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms