RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 PNMA6FA0A0J9YX94 578 aa20.28■□□□□ 0.84
CAPN1-201ENST00000279247 SHTN1A0MZ66 631 aa20.28■□□□□ 0.84
CAPN1-201ENST00000279247 SH3RF1Q7Z6J0 888 aa20.28■□□□□ 0.84
CAPN1-201ENST00000279247 KANSL2Q9H9L4 492 aa20.28■□□□□ 0.84
CAPN1-201ENST00000279247 SLC37A4O43826 429 aa20.27■□□□□ 0.84
CAPN1-201ENST00000279247 MARCH6O60337 910 aa20.27■□□□□ 0.84
CAPN1-201ENST00000279247 SFPQP23246 707 aaKnown RBP eCLIP20.27■□□□□ 0.84
CAPN1-201ENST00000279247 DALRD3Q5D0E6 543 aaKnown RBP20.27■□□□□ 0.84
CAPN1-201ENST00000279247 ARMCX5Q6P1M9 558 aa20.27■□□□□ 0.84
CAPN1-201ENST00000279247 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.27■□□□□ 0.84
CAPN1-201ENST00000279247 UQCRHLA0A096LP55 91 aa20.27■□□□□ 0.84
CAPN1-201ENST00000279247 F5H6K3 240 aa20.27■□□□□ 0.84
CAPN1-201ENST00000279247 UQCRHP07919 91 aa20.27■□□□□ 0.84
CAPN1-201ENST00000279247 KLRC3Q07444 240 aa20.27■□□□□ 0.84
CAPN1-201ENST00000279247 QRICH1Q2TAL8 776 aa20.27■□□□□ 0.84
CAPN1-201ENST00000279247 CCDC84Q86UT8 332 aaPredicted RBP20.27■□□□□ 0.84
CAPN1-201ENST00000279247 TSC1Q92574 1164 aa20.27■□□□□ 0.84
CAPN1-201ENST00000279247 EHD4Q9H223 541 aa20.27■□□□□ 0.84
CAPN1-201ENST00000279247 COL4A5P29400 1685 aa20.27■□□□□ 0.83
CAPN1-201ENST00000279247 SYNRGQ9UMZ2 1314 aa20.27■□□□□ 0.83
CAPN1-201ENST00000279247 PTGER2P43116 358 aa20.27■□□□□ 0.83
CAPN1-201ENST00000279247 RSBN1LQ6PCB5 846 aaPredicted RBP20.27■□□□□ 0.83
CAPN1-201ENST00000279247 CABP7Q86V35 215 aa20.27■□□□□ 0.83
CAPN1-201ENST00000279247 SIAH1Q8IUQ4 282 aa20.27■□□□□ 0.83
CAPN1-201ENST00000279247 SPATA20Q8TB22 786 aa20.27■□□□□ 0.83
CAPN1-201ENST00000279247 LRRC15Q8TF66 581 aa20.27■□□□□ 0.83
CAPN1-201ENST00000279247 PCDHA1Q9Y5I3 950 aa20.27■□□□□ 0.83
CAPN1-201ENST00000279247 PLCG1P19174 1290 aa20.26■□□□□ 0.83
CAPN1-201ENST00000279247 HDLBPQ00341 1268 aaKnown RBP20.26■□□□□ 0.83
CAPN1-201ENST00000279247 RASSF7Q02833 373 aa20.26■□□□□ 0.83
CAPN1-201ENST00000279247 GPATCH4Q5T3I0 446 aaKnown RBP20.26■□□□□ 0.83
CAPN1-201ENST00000279247 PSTPIP2Q9H939 334 aa20.26■□□□□ 0.83
CAPN1-201ENST00000279247 SPTLC3Q9NUV7 552 aa20.26■□□□□ 0.83
CAPN1-201ENST00000279247 POTEMA6NI47 508 aa20.26■□□□□ 0.83
CAPN1-201ENST00000279247 ZBTB5O15062 677 aa20.26■□□□□ 0.83
CAPN1-201ENST00000279247 ECE1P42892 770 aa20.26■□□□□ 0.83
CAPN1-201ENST00000279247 NAALADL2Q58DX5 795 aa20.26■□□□□ 0.83
CAPN1-201ENST00000279247 TRIML1Q8N9V2 468 aa20.26■□□□□ 0.83
CAPN1-201ENST00000279247 GSDMAQ96QA5 445 aa20.26■□□□□ 0.83
CAPN1-201ENST00000279247 TMEM39BQ9GZU3 492 aa20.26■□□□□ 0.83
CAPN1-201ENST00000279247 CCZ1BP86790 482 aa20.25■□□□□ 0.83
CAPN1-201ENST00000279247 CCZ1P86791 482 aaPredicted RBP20.25■□□□□ 0.83
CAPN1-201ENST00000279247 CALCRLQ16602 461 aa20.25■□□□□ 0.83
CAPN1-201ENST00000279247 INTS13Q9NVM9 706 aa20.25■□□□□ 0.83
CAPN1-201ENST00000279247 CDC37Q16543 378 aaPredicted RBP20.25■□□□□ 0.83
CAPN1-201ENST00000279247 ELOA2Q8IYF1 753 aaPredicted RBP20.25■□□□□ 0.83
CAPN1-201ENST00000279247 RTKN2Q8IZC4 609 aa20.25■□□□□ 0.83
CAPN1-201ENST00000279247 ENOX1Q8TC92 643 aaKnown RBP20.25■□□□□ 0.83
CAPN1-201ENST00000279247 SPDYE2BA6NHP3 402 aa20.24■□□□□ 0.83
CAPN1-201ENST00000279247 NDUFB10O96000 172 aa20.24■□□□□ 0.83
CAPN1-201ENST00000279247 RPN1P04843 607 aaKnown RBP20.24■□□□□ 0.83
CAPN1-201ENST00000279247 SPDYE6P0CI01 402 aa20.24■□□□□ 0.83
CAPN1-201ENST00000279247 SGIP1Q9BQI5 828 aa20.24■□□□□ 0.83
CAPN1-201ENST00000279247 GTPBP6O43824 516 aaPredicted RBP20.24■□□□□ 0.83
CAPN1-201ENST00000279247 CCT6AP40227 531 aaKnown RBP20.24■□□□□ 0.83
CAPN1-201ENST00000279247 TMEM179Q6ZVK1 233 aa20.24■□□□□ 0.83
CAPN1-201ENST00000279247 CUL5Q93034 780 aa20.24■□□□□ 0.83
CAPN1-201ENST00000279247 QSER1Q2KHR3 1735 aa20.24■□□□□ 0.83
CAPN1-201ENST00000279247 A0A1W2PRG0 241 aa20.24■□□□□ 0.83
CAPN1-201ENST00000279247 SMARCA1P28370 1054 aa20.24■□□□□ 0.83
CAPN1-201ENST00000279247 NIM1KQ8IY84 436 aa20.24■□□□□ 0.83
CAPN1-201ENST00000279247 CPLX3Q8WVH0 158 aa20.24■□□□□ 0.83
CAPN1-201ENST00000279247 ZNF70Q9UC06 446 aaPredicted RBP20.24■□□□□ 0.83
CAPN1-201ENST00000279247 CBFA2T2O43439 604 aa20.23■□□□□ 0.83
CAPN1-201ENST00000279247 ACER1Q8TDN7 264 aa20.23■□□□□ 0.83
CAPN1-201ENST00000279247 MRIQ9BWK5 157 aa20.23■□□□□ 0.83
CAPN1-201ENST00000279247 HDAC9Q9UKV0 1011 aa20.23■□□□□ 0.83
CAPN1-201ENST00000279247 PPP1R3GB7ZBB8 358 aa20.23■□□□□ 0.83
CAPN1-201ENST00000279247 GSDMDP57764 484 aa20.23■□□□□ 0.83
CAPN1-201ENST00000279247 FKBP1AP62942 108 aaKnown RBP20.23■□□□□ 0.83
CAPN1-201ENST00000279247 TRIM49BA6NDI0 452 aa20.22■□□□□ 0.83
CAPN1-201ENST00000279247 TATDN1Q6P1N9 297 aa20.22■□□□□ 0.83
CAPN1-201ENST00000279247 HPS3Q969F9 1004 aa20.22■□□□□ 0.83
CAPN1-201ENST00000279247 MYO3BQ8WXR4 1341 aa20.22■□□□□ 0.83
CAPN1-201ENST00000279247 NFKBIEO00221 500 aa20.22■□□□□ 0.83
CAPN1-201ENST00000279247 PES1O00541 588 aaKnown RBP20.22■□□□□ 0.83
CAPN1-201ENST00000279247 TEX33O43247 280 aa20.22■□□□□ 0.83
CAPN1-201ENST00000279247 TNNT1P13805 278 aa20.22■□□□□ 0.83
CAPN1-201ENST00000279247 TGFB2P61812 414 aa20.22■□□□□ 0.83
CAPN1-201ENST00000279247 NBPF9Q3BBW0 867 aa20.22■□□□□ 0.83
CAPN1-201ENST00000279247 MRPL12P52815 198 aaKnown RBP20.21■□□□□ 0.83
CAPN1-201ENST00000279247 ADKP55263 362 aaKnown RBP20.21■□□□□ 0.83
CAPN1-201ENST00000279247 RBM10P98175 930 aaKnown RBP20.21■□□□□ 0.83
CAPN1-201ENST00000279247 NYAP2Q9P242 653 aa20.21■□□□□ 0.83
CAPN1-201ENST00000279247 LRWD1Q9UFC0 647 aa20.21■□□□□ 0.83
CAPN1-201ENST00000279247 MORC2Q9Y6X9 1032 aaPredicted RBP20.21■□□□□ 0.83
CAPN1-201ENST00000279247 PRELPP51888 382 aa20.21■□□□□ 0.83
CAPN1-201ENST00000279247 RIC8AQ9NPQ8 531 aa20.21■□□□□ 0.83
CAPN1-201ENST00000279247 ESYT2A0FGR8 921 aa20.21■□□□□ 0.83
CAPN1-201ENST00000279247 EDIL3O43854 480 aa20.21■□□□□ 0.83
CAPN1-201ENST00000279247 HOXA13P31271 388 aaPredicted RBP20.21■□□□□ 0.83
CAPN1-201ENST00000279247 PRCPP42785 496 aa20.21■□□□□ 0.83
CAPN1-201ENST00000279247 ASIC1P78348 528 aa20.21■□□□□ 0.83
CAPN1-201ENST00000279247 NELFBQ8WX92 580 aa20.21■□□□□ 0.83
CAPN1-201ENST00000279247 CDK5RAP3Q96JB5 506 aa20.21■□□□□ 0.83
CAPN1-201ENST00000279247 ZNF18P17022 549 aa20.2■□□□□ 0.82
CAPN1-201ENST00000279247 ERCC5P28715 1186 aaPredicted RBP20.2■□□□□ 0.82
CAPN1-201ENST00000279247 CXCL9Q07325 125 aa20.2■□□□□ 0.82
CAPN1-201ENST00000279247 KMT5BQ4FZB7 885 aa20.2■□□□□ 0.82
CAPN1-201ENST00000279247 SPATA1Q5VX52 437 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms