RNA–Protein interactions for RNA: ENST00000277549.9

CACNA1B-201, Transcript of calcium voltage-gated channel subunit alpha1 B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1B, Length 7,158 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1B-201ENST00000277549 CCDC94Q9BW85 323 aaPredicted RBP22.26■■□□□ 1.15
CACNA1B-201ENST00000277549 IFIH1Q9BYX4 1025 aaKnown RBP22.26■■□□□ 1.15
CACNA1B-201ENST00000277549 PCDHA12Q9UN75 941 aa22.26■■□□□ 1.15
CACNA1B-201ENST00000277549 SNX14Q9Y5W7 946 aa22.26■■□□□ 1.15
CACNA1B-201ENST00000277549 POC1B-GALNT4F8VUJ3 575 aa22.26■■□□□ 1.15
CACNA1B-201ENST00000277549 ANXA13P27216 316 aa22.26■■□□□ 1.15
CACNA1B-201ENST00000277549 TRAPPC10P48553 1259 aa22.26■■□□□ 1.15
CACNA1B-201ENST00000277549 NSUN2Q08J23 767 aaKnown RBP eCLIP22.26■■□□□ 1.15
CACNA1B-201ENST00000277549 FAM178BQ8IXR5 827 aa22.26■■□□□ 1.15
CACNA1B-201ENST00000277549 ANKRD36BP1Q96IX9 119 aa22.26■■□□□ 1.15
CACNA1B-201ENST00000277549 SUGT1Q9Y2Z0 365 aa22.26■■□□□ 1.15
CACNA1B-201ENST00000277549 HNRNPCL2B2RXH8 293 aa22.25■■□□□ 1.15
CACNA1B-201ENST00000277549 HNRNPCL1O60812 293 aaKnown RBP22.25■■□□□ 1.15
CACNA1B-201ENST00000277549 OPHN1O60890 802 aa22.25■■□□□ 1.15
CACNA1B-201ENST00000277549 RXRBP28702 533 aa22.25■■□□□ 1.15
CACNA1B-201ENST00000277549 SERPINB6P35237 376 aa22.25■■□□□ 1.15
CACNA1B-201ENST00000277549 GJA10Q969M2 543 aa22.25■■□□□ 1.15
CACNA1B-201ENST00000277549 LMNTD2Q8IXW0 634 aa22.25■■□□□ 1.15
CACNA1B-201ENST00000277549 FAM8A1Q9UBU6 413 aa22.25■■□□□ 1.15
CACNA1B-201ENST00000277549 MEIS1O00470 390 aa22.25■■□□□ 1.15
CACNA1B-201ENST00000277549 CCDC157Q569K6 752 aa22.25■■□□□ 1.15
CACNA1B-201ENST00000277549 ZSCAN10Q96SZ4 725 aaPredicted RBP22.25■■□□□ 1.15
CACNA1B-201ENST00000277549 FAM49AQ9H0Q0 323 aaPredicted RBP22.25■■□□□ 1.15
CACNA1B-201ENST00000277549 F5H423 210 aaPredicted RBP22.25■■□□□ 1.15
CACNA1B-201ENST00000277549 GSTA4O15217 222 aa22.25■■□□□ 1.15
CACNA1B-201ENST00000277549 BFSP1Q12934 665 aa22.25■■□□□ 1.15
CACNA1B-201ENST00000277549 NXF1Q9UBU9 619 aaKnown RBP22.25■■□□□ 1.15
CACNA1B-201ENST00000277549 CCDC93Q567U6 631 aa22.25■■□□□ 1.15
CACNA1B-201ENST00000277549 CDC37L1Q7L3B6 337 aa22.25■■□□□ 1.15
CACNA1B-201ENST00000277549 MCF2L2Q86YR7 1114 aa22.25■■□□□ 1.15
CACNA1B-201ENST00000277549 SLFN13Q68D06 897 aa22.24■■□□□ 1.15
CACNA1B-201ENST00000277549 LRGUKQ96M69 825 aa22.24■■□□□ 1.15
CACNA1B-201ENST00000277549 CUTAO60888 179 aa22.24■■□□□ 1.15
CACNA1B-201ENST00000277549 TRIM14Q14142 442 aa22.24■■□□□ 1.15
CACNA1B-201ENST00000277549 CFAP36Q96G28 342 aa22.24■■□□□ 1.15
CACNA1B-201ENST00000277549 RIC8AQ9NPQ8 531 aa22.24■■□□□ 1.15
CACNA1B-201ENST00000277549 KRIT1O00522 736 aa22.24■■□□□ 1.15
CACNA1B-201ENST00000277549 PDZD4Q76G19 769 aaPredicted RBP22.24■■□□□ 1.15
CACNA1B-201ENST00000277549 KRT71Q3SY84 523 aa22.24■■□□□ 1.15
CACNA1B-201ENST00000277549 EIF4G3O43432 1585 aaKnown RBP22.24■■□□□ 1.15
CACNA1B-201ENST00000277549 KDM5BQ9UGL1 1544 aa22.24■■□□□ 1.15
CACNA1B-201ENST00000277549 CD58P19256 250 aa22.24■■□□□ 1.15
CACNA1B-201ENST00000277549 SLC9A5Q14940 896 aa22.24■■□□□ 1.15
CACNA1B-201ENST00000277549 FAM71BQ8TC56 605 aa22.24■■□□□ 1.15
CACNA1B-201ENST00000277549 PCF11O94913 1555 aaKnown RBP22.23■■□□□ 1.15
CACNA1B-201ENST00000277549 IQGAP2Q13576 1575 aa22.23■■□□□ 1.15
CACNA1B-201ENST00000277549 MAP3K19Q56UN5 1328 aa22.23■■□□□ 1.15
CACNA1B-201ENST00000277549 RLBP1P12271 317 aa22.23■■□□□ 1.15
CACNA1B-201ENST00000277549 TFAMQ00059 246 aaKnown RBP22.23■■□□□ 1.15
CACNA1B-201ENST00000277549 SRGAP2CP0DJJ0 459 aa22.23■■□□□ 1.15
CACNA1B-201ENST00000277549 RCN2Q14257 317 aa22.23■■□□□ 1.15
CACNA1B-201ENST00000277549 ZNF577Q9BSK1 485 aa22.23■■□□□ 1.15
CACNA1B-201ENST00000277549 XAB2Q9HCS7 855 aaKnown RBP22.23■■□□□ 1.15
CACNA1B-201ENST00000277549 ZNF148Q9UQR1 794 aa22.23■■□□□ 1.15
CACNA1B-201ENST00000277549 PHBP35232 272 aa22.23■■□□□ 1.15
CACNA1B-201ENST00000277549 PDCD6IPQ8WUM4 868 aaKnown RBP22.23■■□□□ 1.15
CACNA1B-201ENST00000277549 NUP58Q9BVL2 599 aa22.23■■□□□ 1.15
CACNA1B-201ENST00000277549 STAT1P42224 750 aa22.23■■□□□ 1.15
CACNA1B-201ENST00000277549 NLRP12P59046 1061 aa22.23■■□□□ 1.15
CACNA1B-201ENST00000277549 PHEXP78562 749 aa22.23■■□□□ 1.15
CACNA1B-201ENST00000277549 TFDP1Q14186 410 aa22.23■■□□□ 1.15
CACNA1B-201ENST00000277549 ARHGAP45Q92619 1136 aa22.23■■□□□ 1.15
CACNA1B-201ENST00000277549 ARPP21Q9UBL0 812 aaPredicted RBP22.23■■□□□ 1.15
CACNA1B-201ENST00000277549 GIGYF1O75420 1035 aaPredicted RBP22.23■■□□□ 1.15
CACNA1B-201ENST00000277549 CLNS1AP54105 237 aaKnown RBP22.23■■□□□ 1.15
CACNA1B-201ENST00000277549 DBN1Q16643 649 aa22.23■■□□□ 1.15
CACNA1B-201ENST00000277549 MTERF2Q49AM1 385 aa22.23■■□□□ 1.15
CACNA1B-201ENST00000277549 RWDD4Q6NW29 188 aaKnown RBP22.23■■□□□ 1.15
CACNA1B-201ENST00000277549 USP19O94966 1318 aa22.22■■□□□ 1.15
CACNA1B-201ENST00000277549 PPP1R2P41236 205 aa22.22■■□□□ 1.15
CACNA1B-201ENST00000277549 TBC1D22AQ8WUA7 517 aa22.22■■□□□ 1.15
CACNA1B-201ENST00000277549 HNRNPDLO14979 420 aaKnown RBP22.22■■□□□ 1.15
CACNA1B-201ENST00000277549 PTPN21Q16825 1174 aa22.22■■□□□ 1.15
CACNA1B-201ENST00000277549 VAMP4O75379 141 aa22.22■■□□□ 1.15
CACNA1B-201ENST00000277549 KDM3AQ9Y4C1 1321 aa22.22■■□□□ 1.15
CACNA1B-201ENST00000277549 RGS16O15492 202 aaPredicted RBP22.21■■□□□ 1.15
CACNA1B-201ENST00000277549 TBCCQ15814 346 aa22.21■■□□□ 1.15
CACNA1B-201ENST00000277549 CFAP221Q4G0U5 840 aa22.21■■□□□ 1.15
CACNA1B-201ENST00000277549 MYOCDQ8IZQ8 938 aa22.21■■□□□ 1.15
CACNA1B-201ENST00000277549 DNAAF3Q8N9W5 541 aa22.21■■□□□ 1.15
CACNA1B-201ENST00000277549 CCNA1P78396 465 aa22.21■■□□□ 1.15
CACNA1B-201ENST00000277549 YIPF2Q9BWQ6 316 aa22.21■■□□□ 1.15
CACNA1B-201ENST00000277549 NFE2L3Q9Y4A8 694 aa22.21■■□□□ 1.15
CACNA1B-201ENST00000277549 LMNB1P20700 586 aa22.21■■□□□ 1.15
CACNA1B-201ENST00000277549 MYL7Q01449 175 aa22.21■■□□□ 1.15
CACNA1B-201ENST00000277549 HAUS1Q96CS2 278 aa22.21■■□□□ 1.15
CACNA1B-201ENST00000277549 E7EWF7 191 aa22.21■■□□□ 1.15
CACNA1B-201ENST00000277549 MIS18BP1Q6P0N0 1132 aa22.21■■□□□ 1.15
CACNA1B-201ENST00000277549 DDX41Q9UJV9 622 aaKnown RBP22.21■■□□□ 1.15
CACNA1B-201ENST00000277549 ESRRBO95718 433 aa22.21■■□□□ 1.15
CACNA1B-201ENST00000277549 CDO1Q16878 200 aa22.21■■□□□ 1.15
CACNA1B-201ENST00000277549 RAB44Q7Z6P3 723 aaPredicted RBP22.21■■□□□ 1.15
CACNA1B-201ENST00000277549 LZTS2Q9BRK4 669 aa22.21■■□□□ 1.15
CACNA1B-201ENST00000277549 ATP8A2Q9NTI2 1148 aa22.21■■□□□ 1.15
CACNA1B-201ENST00000277549 CTNNA1P35221 906 aaKnown RBP22.21■■□□□ 1.15
CACNA1B-201ENST00000277549 PRXQ9BXM0 1461 aa22.21■■□□□ 1.15
CACNA1B-201ENST00000277549 GOLGA8CPA6NN73 597 aa22.2■■□□□ 1.14
CACNA1B-201ENST00000277549 CLIC2O15247 247 aa22.2■■□□□ 1.14
CACNA1B-201ENST00000277549 NFX1Q12986 1120 aaKnown RBP22.2■■□□□ 1.14
CACNA1B-201ENST00000277549 TROVE2P10155 538 aaKnown RBP eCLIP22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms