RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 YIPF3Q9GZM5 350 aa14.25□□□□□ -0.13
HERC6-202ENST00000273960 ANKRD18BA2A2Z9 1011 aa14.24□□□□□ -0.13
HERC6-202ENST00000273960 TARSL2A2RTX5 802 aaKnown RBP14.24□□□□□ -0.13
HERC6-202ENST00000273960 AP1G2O75843 785 aa14.24□□□□□ -0.13
HERC6-202ENST00000273960 FTCDO95954 541 aa14.24□□□□□ -0.13
HERC6-202ENST00000273960 MTIF2P46199 727 aaKnown RBP14.24□□□□□ -0.13
HERC6-202ENST00000273960 FUKQ8N0W3 1084 aa14.24□□□□□ -0.13
HERC6-202ENST00000273960 TRIML1Q8N9V2 468 aa14.24□□□□□ -0.13
HERC6-202ENST00000273960 IFIH1Q9BYX4 1025 aaKnown RBP14.24□□□□□ -0.13
HERC6-202ENST00000273960 SRPRBQ9Y5M8 271 aaKnown RBP14.24□□□□□ -0.13
HERC6-202ENST00000273960 TACC1O75410 805 aa14.24□□□□□ -0.13
HERC6-202ENST00000273960 SMTNP53814 917 aa14.24□□□□□ -0.13
HERC6-202ENST00000273960 NTRK3Q16288 839 aa14.24□□□□□ -0.13
HERC6-202ENST00000273960 TBC1D1Q86TI0 1168 aaPredicted RBP14.24□□□□□ -0.13
HERC6-202ENST00000273960 PLAAQ9Y263 795 aa14.24□□□□□ -0.13
HERC6-202ENST00000273960 RGPD1P0DJD0 1748 aa14.24□□□□□ -0.13
HERC6-202ENST00000273960 SNX1Q13596 522 aa14.24□□□□□ -0.13
HERC6-202ENST00000273960 FAM133BQ5BKY9 247 aaKnown RBP14.24□□□□□ -0.13
HERC6-202ENST00000273960 HAUS3Q68CZ6 603 aa14.24□□□□□ -0.13
HERC6-202ENST00000273960 DNAAF5Q86Y56 855 aa14.24□□□□□ -0.13
HERC6-202ENST00000273960 MB21D1Q8N884 522 aa14.24□□□□□ -0.13
HERC6-202ENST00000273960 OSBPL9Q96SU4 736 aa14.24□□□□□ -0.13
HERC6-202ENST00000273960 OSBPL7Q9BZF2 842 aa14.24□□□□□ -0.13
HERC6-202ENST00000273960 MYH10P35580 1976 aa14.24□□□□□ -0.13
HERC6-202ENST00000273960 ERVV-2B6SEH9 535 aa14.23□□□□□ -0.13
HERC6-202ENST00000273960 MDH1P40925 334 aaKnown RBP14.23□□□□□ -0.13
HERC6-202ENST00000273960 SLC4A8Q2Y0W8 1093 aa14.23□□□□□ -0.13
HERC6-202ENST00000273960 DZIP3Q86Y13 1208 aaKnown RBP14.23□□□□□ -0.13
HERC6-202ENST00000273960 KSR1Q8IVT5 923 aa14.23□□□□□ -0.13
HERC6-202ENST00000273960 MDM1Q8TC05 714 aa14.23□□□□□ -0.13
HERC6-202ENST00000273960 TRIM31Q9BZY9 425 aa14.23□□□□□ -0.13
HERC6-202ENST00000273960 MMRN2Q9H8L6 949 aa14.23□□□□□ -0.13
HERC6-202ENST00000273960 MINDY4BA8MYZ0 360 aa14.23□□□□□ -0.13
HERC6-202ENST00000273960 SMIM22K7EJ46 135 aa14.23□□□□□ -0.13
HERC6-202ENST00000273960 EYA2O00167 538 aa14.23□□□□□ -0.13
HERC6-202ENST00000273960 RASSF7Q02833 373 aa14.23□□□□□ -0.13
HERC6-202ENST00000273960 PTGDRQ13258 359 aa14.23□□□□□ -0.13
HERC6-202ENST00000273960 DDB1Q16531 1140 aa14.23□□□□□ -0.13
HERC6-202ENST00000273960 NSMCE1Q8WV22 266 aa14.23□□□□□ -0.13
HERC6-202ENST00000273960 UBLCP1Q8WVY7 318 aaPredicted RBP14.23□□□□□ -0.13
HERC6-202ENST00000273960 APPBP2Q92624 585 aa14.23□□□□□ -0.13
HERC6-202ENST00000273960 SNX12Q9UMY4 172 aa14.23□□□□□ -0.13
HERC6-202ENST00000273960 TCIRG1Q13488 830 aa14.23□□□□□ -0.13
HERC6-202ENST00000273960 TDRD12Q587J7 1177 aaKnown RBP14.23□□□□□ -0.13
HERC6-202ENST00000273960 NT5DC1Q5TFE4 455 aa14.23□□□□□ -0.13
HERC6-202ENST00000273960 PARD3BQ8TEW8 1205 aa14.23□□□□□ -0.13
HERC6-202ENST00000273960 HPS3Q969F9 1004 aa14.23□□□□□ -0.13
HERC6-202ENST00000273960 C8orf37Q96NL8 207 aa14.23□□□□□ -0.13
HERC6-202ENST00000273960 GOLPH3Q9H4A6 298 aa14.23□□□□□ -0.13
HERC6-202ENST00000273960 LY9Q9HBG7 655 aa14.23□□□□□ -0.13
HERC6-202ENST00000273960 PP2D1A8MPX8 630 aa14.22□□□□□ -0.13
HERC6-202ENST00000273960 PRKAB2O43741 272 aa14.22□□□□□ -0.13
HERC6-202ENST00000273960 UHMK1Q8TAS1 419 aaKnown RBP14.22□□□□□ -0.13
HERC6-202ENST00000273960 V9GY48 417 aaPredicted RBP14.22□□□□□ -0.13
HERC6-202ENST00000273960 IRS4O14654 1257 aaPredicted RBP14.22□□□□□ -0.13
HERC6-202ENST00000273960 IL15P40933 162 aaPredicted RBP14.22□□□□□ -0.13
HERC6-202ENST00000273960 DDR1Q08345 913 aa14.22□□□□□ -0.13
HERC6-202ENST00000273960 FMNL3Q8IVF7 1028 aa14.22□□□□□ -0.13
HERC6-202ENST00000273960 NAPBQ9H115 298 aa14.22□□□□□ -0.13
HERC6-202ENST00000273960 XDHP47989 1333 aa14.21□□□□□ -0.13
HERC6-202ENST00000273960 TLDC2A0PJX2 215 aa14.21□□□□□ -0.13
HERC6-202ENST00000273960 ZNF263O14978 683 aa14.21□□□□□ -0.13
HERC6-202ENST00000273960 RASSF9O75901 435 aa14.21□□□□□ -0.13
HERC6-202ENST00000273960 KCNB1Q14721 858 aa14.21□□□□□ -0.13
HERC6-202ENST00000273960 KCNV2Q8TDN2 545 aa14.21□□□□□ -0.13
HERC6-202ENST00000273960 NGLY1Q96IV0 654 aa14.21□□□□□ -0.13
HERC6-202ENST00000273960 FAM237AA0A1B0GTK4 181 aa14.21□□□□□ -0.13
HERC6-202ENST00000273960 USO1O60763 962 aaKnown RBP14.21□□□□□ -0.13
HERC6-202ENST00000273960 ITGA6P23229 1130 aa14.21□□□□□ -0.13
HERC6-202ENST00000273960 CCDC178Q5BJE1 867 aa14.21□□□□□ -0.13
HERC6-202ENST00000273960 GREM2Q9H772 168 aa14.21□□□□□ -0.13
HERC6-202ENST00000273960 CEP131Q9UPN4 1083 aa14.21□□□□□ -0.13
HERC6-202ENST00000273960 LMTK3Q96Q04 1460 aa14.21□□□□□ -0.13
HERC6-202ENST00000273960 DCDC2CA8MYV0 355 aa14.21□□□□□ -0.14
HERC6-202ENST00000273960 LGR5O75473 907 aa14.21□□□□□ -0.14
HERC6-202ENST00000273960 MIGA1Q8NAN2 632 aa14.21□□□□□ -0.14
HERC6-202ENST00000273960 EHBP1Q8NDI1 1231 aa14.21□□□□□ -0.14
HERC6-202ENST00000273960 IGDCC4Q8TDY8 1250 aa14.21□□□□□ -0.14
HERC6-202ENST00000273960 RSRC1Q96IZ7 334 aaKnown RBP14.21□□□□□ -0.14
HERC6-202ENST00000273960 ARMT1Q9H993 441 aa14.21□□□□□ -0.14
HERC6-202ENST00000273960 NOVA2Q9UNW9 492 aaKnown RBP14.21□□□□□ -0.14
HERC6-202ENST00000273960 CRYBG1Q9Y4K1 1723 aa14.21□□□□□ -0.14
HERC6-202ENST00000273960 TULP1O00294 542 aaPredicted RBP14.2□□□□□ -0.14
HERC6-202ENST00000273960 PIK3AP1Q6ZUJ8 805 aa14.2□□□□□ -0.14
HERC6-202ENST00000273960 HVCN1Q96D96 273 aa14.2□□□□□ -0.14
HERC6-202ENST00000273960 RPGRIP1Q96KN7 1286 aa14.2□□□□□ -0.14
HERC6-202ENST00000273960 GSDMAQ96QA5 445 aa14.2□□□□□ -0.14
HERC6-202ENST00000273960 CCDC113Q9H0I3 377 aa14.2□□□□□ -0.14
HERC6-202ENST00000273960 LIMA1Q9UHB6 759 aaKnown RBP14.2□□□□□ -0.14
HERC6-202ENST00000273960 STK38LQ9Y2H1 464 aa14.2□□□□□ -0.14
HERC6-202ENST00000273960 UTYO14607 1347 aa14.2□□□□□ -0.14
HERC6-202ENST00000273960 EIF4A3P38919 411 aaKnown RBP14.2□□□□□ -0.14
HERC6-202ENST00000273960 SCTRP47872 440 aa14.2□□□□□ -0.14
HERC6-202ENST00000273960 WTAPQ15007 396 aa14.2□□□□□ -0.14
HERC6-202ENST00000273960 NBPF9Q3BBW0 867 aa14.2□□□□□ -0.14
HERC6-202ENST00000273960 TRIM68Q6AZZ1 485 aa14.2□□□□□ -0.14
HERC6-202ENST00000273960 CSGALNACT2Q8N6G5 542 aa14.2□□□□□ -0.14
HERC6-202ENST00000273960 ZCWPW1Q9H0M4 648 aa14.2□□□□□ -0.14
HERC6-202ENST00000273960 NLRC4Q9NPP4 1024 aa14.2□□□□□ -0.14
HERC6-202ENST00000273960 ABCF2Q9UG63 623 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms