RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 DDRGK1Q96HY6 314 aa10.69□□□□□ -0.7
TPM3-201ENST00000271850 CDX2Q99626 313 aaPredicted RBP10.69□□□□□ -0.7
TPM3-201ENST00000271850 COL25A1Q9BXS0 654 aaPredicted RBP10.69□□□□□ -0.7
TPM3-201ENST00000271850 SEMA6BQ9H3T3 888 aa10.69□□□□□ -0.7
TPM3-201ENST00000271850 MKNK2Q9HBH9 465 aa10.69□□□□□ -0.7
TPM3-201ENST00000271850 IL17RBQ9NRM6 502 aa10.69□□□□□ -0.7
TPM3-201ENST00000271850 CHD7Q9P2D1 2997 aa10.69□□□□□ -0.7
TPM3-201ENST00000271850 NMT2O60551 498 aa10.68□□□□□ -0.7
TPM3-201ENST00000271850 PPP1R37O75864 691 aa10.68□□□□□ -0.7
TPM3-201ENST00000271850 COPB2P35606 906 aa10.68□□□□□ -0.7
TPM3-201ENST00000271850 TDO2P48775 406 aa10.68□□□□□ -0.7
TPM3-201ENST00000271850 PTPN5P54829 565 aa10.68□□□□□ -0.7
TPM3-201ENST00000271850 CNTN2Q02246 1040 aa10.68□□□□□ -0.7
TPM3-201ENST00000271850 KCNA10Q16322 511 aa10.68□□□□□ -0.7
TPM3-201ENST00000271850 TMEM63BQ5T3F8 832 aa10.68□□□□□ -0.7
TPM3-201ENST00000271850 VPS53Q5VIR6 699 aa10.68□□□□□ -0.7
TPM3-201ENST00000271850 C16orf59Q7L2K0 433 aa10.68□□□□□ -0.7
TPM3-201ENST00000271850 RNF180Q86T96 592 aa10.68□□□□□ -0.7
TPM3-201ENST00000271850 MSL3Q8N5Y2 521 aaKnown RBP10.68□□□□□ -0.7
TPM3-201ENST00000271850 CHMP4CQ96CF2 233 aa10.68□□□□□ -0.7
TPM3-201ENST00000271850 UPF3AQ9H1J1 476 aaKnown RBP10.68□□□□□ -0.7
TPM3-201ENST00000271850 CHMP4BQ9H444 224 aaKnown RBP10.68□□□□□ -0.7
TPM3-201ENST00000271850 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.68□□□□□ -0.7
TPM3-201ENST00000271850 PRKAG2Q9UGJ0 569 aa10.68□□□□□ -0.7
TPM3-201ENST00000271850 ZHX1Q9UKY1 873 aaPredicted RBP10.68□□□□□ -0.7
TPM3-201ENST00000271850 TBX21Q9UL17 535 aa10.68□□□□□ -0.7
TPM3-201ENST00000271850 TTC41PQ6P2S7 1318 aa10.67□□□□□ -0.7
TPM3-201ENST00000271850 SOWAHBA6NEL2 793 aa10.67□□□□□ -0.7
TPM3-201ENST00000271850 TTLL1O95922 423 aa10.67□□□□□ -0.7
TPM3-201ENST00000271850 ZFYP08048 801 aaPredicted RBP10.67□□□□□ -0.7
TPM3-201ENST00000271850 CST5P28325 142 aaPredicted RBP10.67□□□□□ -0.7
TPM3-201ENST00000271850 NOVP48745 357 aa10.67□□□□□ -0.7
TPM3-201ENST00000271850 SLC4A3P48751 1232 aa10.67□□□□□ -0.7
TPM3-201ENST00000271850 CDK7P50613 346 aa10.67□□□□□ -0.7
TPM3-201ENST00000271850 SNAP25P60880 206 aa10.67□□□□□ -0.7
TPM3-201ENST00000271850 SMAD3P84022 425 aaKnown RBP10.67□□□□□ -0.7
TPM3-201ENST00000271850 PPARAQ07869 468 aa10.67□□□□□ -0.7
TPM3-201ENST00000271850 ACVR2BQ13705 512 aa10.67□□□□□ -0.7
TPM3-201ENST00000271850 CCDC144BQ3MJ40 725 aa10.67□□□□□ -0.7
TPM3-201ENST00000271850 ZNF697Q5TEC3 545 aa10.67□□□□□ -0.7
TPM3-201ENST00000271850 SLFN13Q68D06 897 aa10.67□□□□□ -0.7
TPM3-201ENST00000271850 ARMCX2Q7L311 632 aa10.67□□□□□ -0.7
TPM3-201ENST00000271850 FAM133AQ8N9E0 248 aa10.67□□□□□ -0.7
TPM3-201ENST00000271850 AGBL1Q96MI9 1066 aa10.67□□□□□ -0.7
TPM3-201ENST00000271850 TSEN34Q9BSV6 310 aaKnown RBP10.67□□□□□ -0.7
TPM3-201ENST00000271850 A1CFQ9NQ94 594 aaKnown RBP10.67□□□□□ -0.7
TPM3-201ENST00000271850 FEM1BQ9UK73 627 aa10.67□□□□□ -0.7
TPM3-201ENST00000271850 SYNPO2Q9UMS6 1093 aa10.67□□□□□ -0.7
TPM3-201ENST00000271850 CNPY2Q9Y2B0 182 aa10.67□□□□□ -0.7
TPM3-201ENST00000271850 TTC28Q96AY4 2481 aa10.66□□□□□ -0.7
TPM3-201ENST00000271850 TMEM232C9JQI7 657 aa10.66□□□□□ -0.7
TPM3-201ENST00000271850 DUSP11O75319 330 aaKnown RBP10.66□□□□□ -0.7
TPM3-201ENST00000271850 ASGR1P07306 291 aa10.66□□□□□ -0.7
TPM3-201ENST00000271850 BMP3P12645 472 aa10.66□□□□□ -0.7
TPM3-201ENST00000271850 GNAT2P19087 354 aa10.66□□□□□ -0.7
TPM3-201ENST00000271850 GJA9P57773 515 aa10.66□□□□□ -0.7
TPM3-201ENST00000271850 NKX3-2P78367 333 aa10.66□□□□□ -0.7
TPM3-201ENST00000271850 TFAP4Q01664 338 aa10.66□□□□□ -0.7
TPM3-201ENST00000271850 CTDSPL2Q05D32 466 aa10.66□□□□□ -0.7
TPM3-201ENST00000271850 MUM1L1Q5H9M0 696 aa10.66□□□□□ -0.7
TPM3-201ENST00000271850 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.66□□□□□ -0.7
TPM3-201ENST00000271850 CCDC144CPQ8IYA2 1237 aa10.66□□□□□ -0.7
TPM3-201ENST00000271850 MYLIPQ8WY64 445 aa10.66□□□□□ -0.7
TPM3-201ENST00000271850 VWCEQ96DN2 955 aa10.66□□□□□ -0.7
TPM3-201ENST00000271850 TOX2Q96NM4 488 aa10.66□□□□□ -0.7
TPM3-201ENST00000271850 PURBQ96QR8 312 aaKnown RBP10.66□□□□□ -0.7
TPM3-201ENST00000271850 IRX2Q9BZI1 471 aaPredicted RBP10.66□□□□□ -0.7
TPM3-201ENST00000271850 GPHNQ9NQX3 736 aaPredicted RBP10.66□□□□□ -0.7
TPM3-201ENST00000271850 STARD7Q9NQZ5 370 aa10.66□□□□□ -0.7
TPM3-201ENST00000271850 HOMER2Q9NSB8 354 aa10.66□□□□□ -0.7
TPM3-201ENST00000271850 FAM184BQ9ULE4 1060 aa10.66□□□□□ -0.7
TPM3-201ENST00000271850 GNEQ9Y223 722 aaKnown RBP10.66□□□□□ -0.7
TPM3-201ENST00000271850 XIRP2A4UGR9 3374 aa10.66□□□□□ -0.7
TPM3-201ENST00000271850 REV3LO60673 3130 aa10.65□□□□□ -0.7
TPM3-201ENST00000271850 GRIN2DO15399 1336 aa10.65□□□□□ -0.7
TPM3-201ENST00000271850 MOXD2PA6NHM9 499 aa10.65□□□□□ -0.7
TPM3-201ENST00000271850 RBAK-RBAKDNI3L0D1 243 aa10.65□□□□□ -0.7
TPM3-201ENST00000271850 ZBED4O75132 1171 aa10.65□□□□□ -0.7
TPM3-201ENST00000271850 APPP05067 770 aa10.65□□□□□ -0.7
TPM3-201ENST00000271850 MCCP23508 829 aa10.65□□□□□ -0.7
TPM3-201ENST00000271850 OAZ1P54368 228 aa10.65□□□□□ -0.7
TPM3-201ENST00000271850 BEX3Q00994 111 aa10.65□□□□□ -0.7
TPM3-201ENST00000271850 RASIP1Q5U651 963 aa10.65□□□□□ -0.7
TPM3-201ENST00000271850 KCTD1Q719H9 257 aa10.65□□□□□ -0.7
TPM3-201ENST00000271850 FAM126BQ8IXS8 530 aa10.65□□□□□ -0.7
TPM3-201ENST00000271850 ZNF444Q8N0Y2 327 aaPredicted RBP10.65□□□□□ -0.7
TPM3-201ENST00000271850 CHST13Q8NET6 341 aa10.65□□□□□ -0.7
TPM3-201ENST00000271850 DDX11Q96FC9 970 aa10.65□□□□□ -0.7
TPM3-201ENST00000271850 GMCL1Q96IK5 515 aa10.65□□□□□ -0.7
TPM3-201ENST00000271850 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.65□□□□□ -0.73e-15■■■□□ 16.8
TPM3-201ENST00000271850 FSD1Q9BTV5 496 aa10.65□□□□□ -0.7
TPM3-201ENST00000271850 TMEM39AQ9NV64 488 aa10.65□□□□□ -0.7
TPM3-201ENST00000271850 VPS9D1Q9Y2B5 631 aa10.65□□□□□ -0.7
TPM3-201ENST00000271850 UMODL1Q5DID0 1318 aa10.64□□□□□ -0.71
TPM3-201ENST00000271850 TIMP1P01033 207 aa10.64□□□□□ -0.71
TPM3-201ENST00000271850 CD4P01730 458 aa10.64□□□□□ -0.71
TPM3-201ENST00000271850 FGRP09769 529 aa10.64□□□□□ -0.71
TPM3-201ENST00000271850 C6orf222P0C671 652 aaPredicted RBP10.64□□□□□ -0.71
TPM3-201ENST00000271850 TSPY3P0CV98 308 aa10.64□□□□□ -0.71
TPM3-201ENST00000271850 TSPY8P0CW00 308 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 142.8 ms