RNA–Protein interactions for RNA: ENST00000266079.4

PRPF6-201, Transcript of pre-mRNA processing factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF6, Length 3,044 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF6-201ENST00000266079 MMP14P50281 582 aa14.29□□□□□ -0.12
PRPF6-201ENST00000266079 ATL3Q6DD88 541 aa14.29□□□□□ -0.12
PRPF6-201ENST00000266079 CPLX2Q6PUV4 134 aaKnown RBP14.29□□□□□ -0.12
PRPF6-201ENST00000266079 SMARCC2Q8TAQ2 1214 aa14.29□□□□□ -0.12
PRPF6-201ENST00000266079 KANSL2Q9H9L4 492 aa14.29□□□□□ -0.12
PRPF6-201ENST00000266079 TCP11L1Q9NUJ3 509 aa14.29□□□□□ -0.12
PRPF6-201ENST00000266079 V9GY48 417 aaPredicted RBP14.29□□□□□ -0.12
PRPF6-201ENST00000266079 VEGFAP15692 232 aaPredicted RBP14.29□□□□□ -0.12
PRPF6-201ENST00000266079 CASQ1P31415 396 aa14.29□□□□□ -0.12
PRPF6-201ENST00000266079 NTRK3Q16288 839 aa14.29□□□□□ -0.12
PRPF6-201ENST00000266079 USP50Q70EL3 339 aaPredicted RBP14.29□□□□□ -0.12
PRPF6-201ENST00000266079 METTL16Q86W50 562 aaKnown RBP14.29□□□□□ -0.12
PRPF6-201ENST00000266079 SRBD1Q8N5C6 995 aaKnown RBP14.29□□□□□ -0.12
PRPF6-201ENST00000266079 EXOC4Q96A65 974 aa14.29□□□□□ -0.12
PRPF6-201ENST00000266079 ZNF396Q96N95 335 aaPredicted RBP14.29□□□□□ -0.12
PRPF6-201ENST00000266079 IGKV6D-41A0A0C4DH26 115 aa14.28□□□□□ -0.12
PRPF6-201ENST00000266079 PHF20L1A8MW92 1017 aa14.28□□□□□ -0.12
PRPF6-201ENST00000266079 TTBK2Q6IQ55 1244 aa14.28□□□□□ -0.12
PRPF6-201ENST00000266079 GPR161Q8N6U8 529 aaKnown RBP14.28□□□□□ -0.12
PRPF6-201ENST00000266079 FANCGO15287 622 aa14.28□□□□□ -0.12
PRPF6-201ENST00000266079 FMR1NBQ8N0W7 255 aaPredicted RBP14.28□□□□□ -0.12
PRPF6-201ENST00000266079 SDF4Q9BRK5 362 aa14.28□□□□□ -0.12
PRPF6-201ENST00000266079 MTA3Q9BTC8 594 aa14.28□□□□□ -0.12
PRPF6-201ENST00000266079 DDAH1O94760 285 aa14.28□□□□□ -0.12
PRPF6-201ENST00000266079 ME1P48163 572 aa14.28□□□□□ -0.12
PRPF6-201ENST00000266079 IKQ13123 557 aaPredicted RBP14.28□□□□□ -0.12
PRPF6-201ENST00000266079 DPCR1Q3MIW9 517 aa14.28□□□□□ -0.12
PRPF6-201ENST00000266079 SRLQ86TD4 932 aa14.28□□□□□ -0.12
PRPF6-201ENST00000266079 ARFGAP3Q9NP61 516 aa14.28□□□□□ -0.12
PRPF6-201ENST00000266079 KLRF2D3W0D1 207 aa14.27□□□□□ -0.12
PRPF6-201ENST00000266079 PDHBP11177 359 aa14.27□□□□□ -0.12
PRPF6-201ENST00000266079 SNAP25P60880 206 aa14.27□□□□□ -0.12
PRPF6-201ENST00000266079 SSRP1Q08945 709 aaKnown RBP14.27□□□□□ -0.12
PRPF6-201ENST00000266079 ZRSR1Q15695 479 aaKnown RBP14.27□□□□□ -0.12
PRPF6-201ENST00000266079 IQUBQ8NA54 791 aa14.27□□□□□ -0.12
PRPF6-201ENST00000266079 CCDC34Q96HJ3 373 aa14.27□□□□□ -0.12
PRPF6-201ENST00000266079 LLPHQ9BRT6 129 aaKnown RBP14.27□□□□□ -0.12
PRPF6-201ENST00000266079 ZNF341Q9BYN7 854 aa14.27□□□□□ -0.12
PRPF6-201ENST00000266079 EPC1Q9H2F5 836 aa14.27□□□□□ -0.12
PRPF6-201ENST00000266079 MAD2L2Q9UI95 211 aa14.27□□□□□ -0.12
PRPF6-201ENST00000266079 PARP1P09874 1014 aaKnown RBP14.27□□□□□ -0.13
PRPF6-201ENST00000266079 CCDC178Q5BJE1 867 aa14.27□□□□□ -0.13
PRPF6-201ENST00000266079 CNKSR2Q8WXI2 1034 aa14.27□□□□□ -0.13
PRPF6-201ENST00000266079 MRPS27Q92552 414 aaKnown RBP14.27□□□□□ -0.13
PRPF6-201ENST00000266079 CDCA5Q96FF9 252 aa14.27□□□□□ -0.13
PRPF6-201ENST00000266079 ALG1Q9BT22 464 aa14.27□□□□□ -0.13
PRPF6-201ENST00000266079 KIAA1468Q9P260 1216 aa14.27□□□□□ -0.13
PRPF6-201ENST00000266079 ADAM21Q9UKJ8 722 aa14.27□□□□□ -0.13
PRPF6-201ENST00000266079 ZC3H4Q9UPT8 1303 aaKnown RBP14.26□□□□□ -0.13
PRPF6-201ENST00000266079 CCDC196A0A1B0GTZ2 297 aa14.26□□□□□ -0.13
PRPF6-201ENST00000266079 TRIM75PA6NK02 468 aa14.26□□□□□ -0.13
PRPF6-201ENST00000266079 F5H6K3 240 aa14.26□□□□□ -0.13
PRPF6-201ENST00000266079 SLC1A4P43007 532 aa14.26□□□□□ -0.13
PRPF6-201ENST00000266079 AKAP17AQ02040 695 aaKnown RBP14.26□□□□□ -0.13
PRPF6-201ENST00000266079 KLRC3Q07444 240 aa14.26□□□□□ -0.13
PRPF6-201ENST00000266079 SLC35G1Q2M3R5 365 aa14.26□□□□□ -0.13
PRPF6-201ENST00000266079 SUPT20HL1Q3ZLR7 823 aa14.26□□□□□ -0.13
PRPF6-201ENST00000266079 KIAA1755Q5JYT7 1200 aa14.26□□□□□ -0.13
PRPF6-201ENST00000266079 DCAF15Q66K64 600 aa14.26□□□□□ -0.13
PRPF6-201ENST00000266079 SLFN13Q68D06 897 aa14.26□□□□□ -0.13
PRPF6-201ENST00000266079 TMTC3Q6ZXV5 915 aa14.26□□□□□ -0.13
PRPF6-201ENST00000266079 FUT8Q9BYC5 575 aa14.26□□□□□ -0.13
PRPF6-201ENST00000266079 YY1AP1Q9H869 796 aa14.26□□□□□ -0.13
PRPF6-201ENST00000266079 TBC1D12O60347 775 aa14.26□□□□□ -0.13
PRPF6-201ENST00000266079 ASNSP08243 561 aa14.26□□□□□ -0.13
PRPF6-201ENST00000266079 CALM1P0DP23 149 aa14.26□□□□□ -0.13
PRPF6-201ENST00000266079 CALM2P0DP24 149 aa14.26□□□□□ -0.13
PRPF6-201ENST00000266079 CALM3P0DP25 149 aa14.26□□□□□ -0.13
PRPF6-201ENST00000266079 TRIM22Q8IYM9 498 aa14.26□□□□□ -0.13
PRPF6-201ENST00000266079 GPKOWQ92917 476 aaPredicted RBP eCLIP14.26□□□□□ -0.13
PRPF6-201ENST00000266079 KCNJ14Q9UNX9 436 aa14.26□□□□□ -0.13
PRPF6-201ENST00000266079 RRP15Q9Y3B9 282 aaKnown RBP14.26□□□□□ -0.13
PRPF6-201ENST00000266079 CDKL5O76039 1030 aa14.25□□□□□ -0.13
PRPF6-201ENST00000266079 IFNAR1P17181 557 aa14.25□□□□□ -0.13
PRPF6-201ENST00000266079 KIF5BP33176 963 aa14.25□□□□□ -0.13
PRPF6-201ENST00000266079 PNMA8AQ86V59 439 aaPredicted RBP14.25□□□□□ -0.13
PRPF6-201ENST00000266079 ANKS1AQ92625 1134 aa14.25□□□□□ -0.13
PRPF6-201ENST00000266079 C8orf76Q96K31 380 aa14.25□□□□□ -0.13
PRPF6-201ENST00000266079 PLIN4Q96Q06 1357 aa14.25□□□□□ -0.13
PRPF6-201ENST00000266079 CYTH3O43739 400 aa14.25□□□□□ -0.13
PRPF6-201ENST00000266079 NDUFB10O96000 172 aa14.25□□□□□ -0.13
PRPF6-201ENST00000266079 ACTN2P35609 894 aa14.25□□□□□ -0.13
PRPF6-201ENST00000266079 LMAN1P49257 510 aa14.25□□□□□ -0.13
PRPF6-201ENST00000266079 SPP2Q13103 211 aa14.25□□□□□ -0.13
PRPF6-201ENST00000266079 GRM4Q14833 912 aa14.25□□□□□ -0.13
PRPF6-201ENST00000266079 NCAPHQ15003 741 aa14.25□□□□□ -0.13
PRPF6-201ENST00000266079 FCHSD1Q86WN1 690 aa14.25□□□□□ -0.13
PRPF6-201ENST00000266079 TMX1Q9H3N1 280 aa14.25□□□□□ -0.13
PRPF6-201ENST00000266079 VPS54Q9P1Q0 977 aa14.25□□□□□ -0.13
PRPF6-201ENST00000266079 PCDHA7Q9UN72 937 aa14.25□□□□□ -0.13
PRPF6-201ENST00000266079 ZHX2Q9Y6X8 837 aa14.25□□□□□ -0.13
PRPF6-201ENST00000266079 COL2A1P02458 1487 aaPredicted RBP14.25□□□□□ -0.13
PRPF6-201ENST00000266079 SSC5DA1L4H1 1573 aa14.25□□□□□ -0.13
PRPF6-201ENST00000266079 ZSCAN12O43309 604 aa14.25□□□□□ -0.13
PRPF6-201ENST00000266079 FANCCQ00597 558 aa14.25□□□□□ -0.13
PRPF6-201ENST00000266079 RSRC2Q7L4I2 434 aaKnown RBP14.25□□□□□ -0.13
PRPF6-201ENST00000266079 KLRG1Q96E93 195 aa14.25□□□□□ -0.13
PRPF6-201ENST00000266079 CLMNQ96JQ2 1002 aa14.25□□□□□ -0.13
PRPF6-201ENST00000266079 PPP1R12BO60237 982 aaPredicted RBP14.24□□□□□ -0.13
PRPF6-201ENST00000266079 USP2O75604 605 aaPredicted RBP14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms