RNA–Protein interactions for RNA: ENST00000264951.8

XRN1-201, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene XRN1, Length 10,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-201ENST00000264951 MAP3K13O43283 966 aa5.93□□□□□ -1.46
XRN1-201ENST00000264951 KDM1AO60341 852 aa5.93□□□□□ -1.46
XRN1-201ENST00000264951 TRAPPC10P48553 1259 aa5.93□□□□□ -1.46
XRN1-201ENST00000264951 TMED10P49755 219 aaKnown RBP5.93□□□□□ -1.46
XRN1-201ENST00000264951 CYLC2Q14093 348 aaPredicted RBP5.93□□□□□ -1.46
XRN1-201ENST00000264951 ANKRD42Q8N9B4 389 aa5.93□□□□□ -1.46
XRN1-201ENST00000264951 ZNF280CQ8ND82 737 aa5.93□□□□□ -1.46
XRN1-201ENST00000264951 DDX54Q8TDD1 881 aaKnown RBP5.93□□□□□ -1.46
XRN1-201ENST00000264951 JPH2Q9BR39 696 aaPredicted RBP5.93□□□□□ -1.46
XRN1-201ENST00000264951 ARHGEF10LQ9HCE6 1279 aa5.93□□□□□ -1.46
XRN1-201ENST00000264951 VAT1LQ9HCJ6 419 aa5.93□□□□□ -1.46
XRN1-201ENST00000264951 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.93□□□□□ -1.46
XRN1-201ENST00000264951 HESX1Q9UBX0 185 aa5.93□□□□□ -1.46
XRN1-201ENST00000264951 TRPC5Q9UL62 973 aaPredicted RBP5.93□□□□□ -1.46
XRN1-201ENST00000264951 TNNC2P02585 160 aa5.93□□□□□ -1.46
XRN1-201ENST00000264951 TAC1P20366 129 aa5.93□□□□□ -1.46
XRN1-201ENST00000264951 S100A5P33763 92 aa5.93□□□□□ -1.46
XRN1-201ENST00000264951 CUL3Q13618 768 aa5.93□□□□□ -1.46
XRN1-201ENST00000264951 SLC9C2Q5TAH2 1124 aa5.93□□□□□ -1.46
XRN1-201ENST00000264951 KSR2Q6VAB6 950 aa5.93□□□□□ -1.46
XRN1-201ENST00000264951 FGD4Q96M96 766 aa5.93□□□□□ -1.46
XRN1-201ENST00000264951 TRIM31Q9BZY9 425 aa5.93□□□□□ -1.46
XRN1-201ENST00000264951 NACA2Q9H009 215 aa5.93□□□□□ -1.46
XRN1-201ENST00000264951 TLK1Q9UKI8 766 aa5.93□□□□□ -1.46
XRN1-201ENST00000264951 PPP2R2CQ9Y2T4 447 aa5.93□□□□□ -1.46
XRN1-201ENST00000264951 MRC2Q9UBG0 1479 aa5.93□□□□□ -1.46
XRN1-201ENST00000264951 C6orf229H3BNL8 230 aa5.92□□□□□ -1.46
XRN1-201ENST00000264951 NEK8Q86SG6 692 aa5.92□□□□□ -1.46
XRN1-201ENST00000264951 LCA5Q86VQ0 697 aa5.92□□□□□ -1.46
XRN1-201ENST00000264951 TRIM69Q86WT6 500 aa5.92□□□□□ -1.46
XRN1-201ENST00000264951 CBX8Q9HC52 389 aa5.92□□□□□ -1.46
XRN1-201ENST00000264951 RSPH10B2B2RC85 870 aa5.92□□□□□ -1.46
XRN1-201ENST00000264951 NR1I2O75469 434 aa5.92□□□□□ -1.46
XRN1-201ENST00000264951 KRT38O76015 456 aa5.92□□□□□ -1.46
XRN1-201ENST00000264951 RSPH10BP0C881 870 aa5.92□□□□□ -1.46
XRN1-201ENST00000264951 MSH2P43246 934 aa5.92□□□□□ -1.46
XRN1-201ENST00000264951 TTC38Q5R3I4 469 aa5.92□□□□□ -1.46
XRN1-201ENST00000264951 NBPF3Q9H094 633 aa5.92□□□□□ -1.46
XRN1-201ENST00000264951 GPBP1L1Q9HC44 474 aaPredicted RBP5.92□□□□□ -1.46
XRN1-201ENST00000264951 KIAA1468Q9P260 1216 aa5.92□□□□□ -1.46
XRN1-201ENST00000264951 ARL2BPQ9Y2Y0 163 aa5.92□□□□□ -1.46
XRN1-201ENST00000264951 ZFYVE9O95405 1425 aa5.92□□□□□ -1.46
XRN1-201ENST00000264951 KIAA2013Q8IYS2 634 aa5.92□□□□□ -1.46
XRN1-201ENST00000264951 DACH2Q96NX9 599 aa5.92□□□□□ -1.46
XRN1-201ENST00000264951 TRIM8Q9BZR9 551 aa5.92□□□□□ -1.46
XRN1-201ENST00000264951 NEUROG2Q9H2A3 272 aa5.92□□□□□ -1.46
XRN1-201ENST00000264951 MRPL47Q9HD33 250 aaKnown RBP5.92□□□□□ -1.46
XRN1-201ENST00000264951 LRWD1Q9UFC0 647 aa5.92□□□□□ -1.46
XRN1-201ENST00000264951 RAD54L2Q9Y4B4 1467 aa5.92□□□□□ -1.46
XRN1-201ENST00000264951 SMARCA5O60264 1052 aaPredicted RBP5.92□□□□□ -1.46
XRN1-201ENST00000264951 IFNB1P01574 187 aa5.92□□□□□ -1.46
XRN1-201ENST00000264951 HNRNPCP07910 306 aaKnown RBP eCLIP5.92□□□□□ -1.46
XRN1-201ENST00000264951 MYO1EQ12965 1108 aa5.92□□□□□ -1.46
XRN1-201ENST00000264951 HERC4Q5GLZ8 1057 aaPredicted RBP5.92□□□□□ -1.46
XRN1-201ENST00000264951 FAM83GA6ND36 823 aa5.92□□□□□ -1.46
XRN1-201ENST00000264951 RPS6KB1P23443 525 aa5.92□□□□□ -1.46
XRN1-201ENST00000264951 PTPREP23469 700 aa5.92□□□□□ -1.46
XRN1-201ENST00000264951 HSPA13P48723 471 aa5.92□□□□□ -1.46
XRN1-201ENST00000264951 ARHGAP44Q17R89 818 aa5.92□□□□□ -1.46
XRN1-201ENST00000264951 KRT26Q7Z3Y9 468 aa5.92□□□□□ -1.46
XRN1-201ENST00000264951 C2CD5Q86YS7 1000 aa5.92□□□□□ -1.46
XRN1-201ENST00000264951 CRLF3Q8IUI8 442 aa5.92□□□□□ -1.46
XRN1-201ENST00000264951 SLFN12Q8IYM2 578 aa5.92□□□□□ -1.46
XRN1-201ENST00000264951 PDIK1LQ8N165 341 aa5.92□□□□□ -1.46
XRN1-201ENST00000264951 SCG3Q8WXD2 468 aaKnown RBP5.92□□□□□ -1.46
XRN1-201ENST00000264951 RSPH1Q8WYR4 309 aa5.92□□□□□ -1.46
XRN1-201ENST00000264951 TADA1Q96BN2 335 aa5.92□□□□□ -1.46
XRN1-201ENST00000264951 NUDCD1Q96RS6 583 aa5.92□□□□□ -1.46
XRN1-201ENST00000264951 LAMC3Q9Y6N6 1575 aa5.92□□□□□ -1.46
XRN1-201ENST00000264951 NR1D1P20393 614 aa5.92□□□□□ -1.46
XRN1-201ENST00000264951 CEP70Q8NHQ1 597 aa5.92□□□□□ -1.46
XRN1-201ENST00000264951 NAF1Q96HR8 494 aaKnown RBP5.92□□□□□ -1.46
XRN1-201ENST00000264951 OLFM1Q99784 485 aa5.92□□□□□ -1.46
XRN1-201ENST00000264951 MAP3K2Q9Y2U5 619 aa5.92□□□□□ -1.46
XRN1-201ENST00000264951 KCNK3O14649 394 aa5.92□□□□□ -1.46
XRN1-201ENST00000264951 APOA4P06727 396 aa5.92□□□□□ -1.46
XRN1-201ENST00000264951 ECE1P42892 770 aa5.92□□□□□ -1.46
XRN1-201ENST00000264951 CYTH1Q15438 398 aa5.92□□□□□ -1.46
XRN1-201ENST00000264951 NELFBQ8WX92 580 aa5.92□□□□□ -1.46
XRN1-201ENST00000264951 WARS2Q9UGM6 360 aaKnown RBP5.92□□□□□ -1.46
XRN1-201ENST00000264951 ZNF215Q9UL58 517 aaPredicted RBP5.92□□□□□ -1.46
XRN1-201ENST00000264951 IGF1RP08069 1367 aa5.92□□□□□ -1.46
XRN1-201ENST00000264951 ECEL1O95672 775 aa5.92□□□□□ -1.46
XRN1-201ENST00000264951 ALCAMQ13740 583 aa5.92□□□□□ -1.46
XRN1-201ENST00000264951 SPARCL1Q14515 664 aa5.92□□□□□ -1.46
XRN1-201ENST00000264951 MORF4L2Q15014 288 aa5.92□□□□□ -1.46
XRN1-201ENST00000264951 SLC30A9Q6PML9 568 aa5.92□□□□□ -1.46
XRN1-201ENST00000264951 RNF169Q8NCN4 708 aa5.92□□□□□ -1.46
XRN1-201ENST00000264951 ST13P5Q8NFI4 369 aaPredicted RBP5.92□□□□□ -1.46
XRN1-201ENST00000264951 SCYL1Q96KG9 808 aa5.92□□□□□ -1.46
XRN1-201ENST00000264951 DENND2AQ9ULE3 1009 aa5.92□□□□□ -1.46
XRN1-201ENST00000264951 EPN1Q9Y6I3 576 aaPredicted RBP5.92□□□□□ -1.46
XRN1-201ENST00000264951 MIF4GDA9UHW6 222 aaKnown RBP5.91□□□□□ -1.46
XRN1-201ENST00000264951 MYO1FO00160 1098 aa5.91□□□□□ -1.46
XRN1-201ENST00000264951 TADA3O75528 432 aa5.91□□□□□ -1.46
XRN1-201ENST00000264951 HEXIM1O94992 359 aaKnown RBP5.91□□□□□ -1.46
XRN1-201ENST00000264951 PDE6AP16499 860 aa5.91□□□□□ -1.46
XRN1-201ENST00000264951 HAND2P61296 217 aa5.91□□□□□ -1.46
XRN1-201ENST00000264951 TRADDQ15628 312 aa5.91□□□□□ -1.46
XRN1-201ENST00000264951 THOC1Q96FV9 657 aaKnown RBP5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms