RNA–Protein interactions for RNA: ENST00000263956.7

GTF3C3-201, Transcript of general transcription factor IIIC subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C3, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-201ENST00000263956 BARHL2Q9NY43 387 aa9.32□□□□□ -0.92
GTF3C3-201ENST00000263956 PRR12Q9ULL5 1215 aa9.32□□□□□ -0.92
GTF3C3-201ENST00000263956 NOD1Q9Y239 953 aa9.32□□□□□ -0.92
GTF3C3-201ENST00000263956 CXCL11O14625 94 aa9.32□□□□□ -0.92
GTF3C3-201ENST00000263956 CBFA2T2O43439 604 aa9.32□□□□□ -0.92
GTF3C3-201ENST00000263956 EIF2AK2P19525 551 aaKnown RBP9.32□□□□□ -0.92
GTF3C3-201ENST00000263956 HOXD10P28358 340 aa9.32□□□□□ -0.92
GTF3C3-201ENST00000263956 STX1AQ16623 288 aa9.32□□□□□ -0.92
GTF3C3-201ENST00000263956 TKFCQ3LXA3 575 aa9.32□□□□□ -0.92
GTF3C3-201ENST00000263956 CABP7Q86V35 215 aa9.32□□□□□ -0.92
GTF3C3-201ENST00000263956 BICD1Q96G01 975 aa9.32□□□□□ -0.92
GTF3C3-201ENST00000263956 NT5C3AQ9H0P0 336 aa9.32□□□□□ -0.92
GTF3C3-201ENST00000263956 RTEL1Q9NZ71 1219 aa9.32□□□□□ -0.92
GTF3C3-201ENST00000263956 TOGARAM1Q9Y4F4 1720 aa9.32□□□□□ -0.92
GTF3C3-201ENST00000263956 LAD1O00515 517 aa9.31□□□□□ -0.92
GTF3C3-201ENST00000263956 FCER1AP12319 257 aa9.31□□□□□ -0.92
GTF3C3-201ENST00000263956 DEKP35659 375 aaKnown RBP9.31□□□□□ -0.92
GTF3C3-201ENST00000263956 PGBD1Q96JS3 809 aa9.31□□□□□ -0.92
GTF3C3-201ENST00000263956 KIF2CQ99661 725 aa9.31□□□□□ -0.92
GTF3C3-201ENST00000263956 NCBP1Q09161 790 aaKnown RBP9.31□□□□□ -0.92
GTF3C3-201ENST00000263956 PTGDRQ13258 359 aa9.31□□□□□ -0.92
GTF3C3-201ENST00000263956 CCDC65Q8IXS2 484 aa9.31□□□□□ -0.92
GTF3C3-201ENST00000263956 NSUN6Q8TEA1 469 aaKnown RBP9.31□□□□□ -0.92
GTF3C3-201ENST00000263956 CCDC102AQ96A19 550 aa9.31□□□□□ -0.92
GTF3C3-201ENST00000263956 CEP89Q96ST8 783 aa9.31□□□□□ -0.92
GTF3C3-201ENST00000263956 RMDN3Q96TC7 470 aa9.31□□□□□ -0.92
GTF3C3-201ENST00000263956 TBC1D12O60347 775 aa9.31□□□□□ -0.92
GTF3C3-201ENST00000263956 SLC51AQ86UW1 340 aa9.31□□□□□ -0.92
GTF3C3-201ENST00000263956 USP25Q9UHP3 1055 aa9.31□□□□□ -0.92
GTF3C3-201ENST00000263956 PCDHA6Q9UN73 950 aa9.31□□□□□ -0.92
GTF3C3-201ENST00000263956 PCDHA8Q9Y5H6 950 aa9.31□□□□□ -0.92
GTF3C3-201ENST00000263956 CAVIN2O95810 425 aa9.31□□□□□ -0.92
GTF3C3-201ENST00000263956 KCNA3P22001 575 aa9.31□□□□□ -0.92
GTF3C3-201ENST00000263956 TROAPQ12815 778 aa9.31□□□□□ -0.92
GTF3C3-201ENST00000263956 LRCH2Q5VUJ6 765 aa9.31□□□□□ -0.92
GTF3C3-201ENST00000263956 SEPT14Q6ZU15 432 aa9.31□□□□□ -0.92
GTF3C3-201ENST00000263956 OTUD6AQ7L8S5 288 aa9.31□□□□□ -0.92
GTF3C3-201ENST00000263956 OPTNQ96CV9 577 aa9.31□□□□□ -0.92
GTF3C3-201ENST00000263956 MMP19Q99542 508 aa9.31□□□□□ -0.92
GTF3C3-201ENST00000263956 ZNF577Q9BSK1 485 aa9.31□□□□□ -0.92
GTF3C3-201ENST00000263956 WDR11Q9BZH6 1224 aa9.31□□□□□ -0.92
GTF3C3-201ENST00000263956 KIAA1683Q9H0B3 1180 aa9.31□□□□□ -0.92
GTF3C3-201ENST00000263956 AP5M1Q9H0R1 490 aa9.31□□□□□ -0.92
GTF3C3-201ENST00000263956 ZHX1Q9UKY1 873 aaPredicted RBP9.31□□□□□ -0.92
GTF3C3-201ENST00000263956 KDM3AQ9Y4C1 1321 aa9.3□□□□□ -0.92
GTF3C3-201ENST00000263956 TECP42680 631 aa9.3□□□□□ -0.92
GTF3C3-201ENST00000263956 ISM2Q6H9L7 571 aa9.3□□□□□ -0.92
GTF3C3-201ENST00000263956 TPH2Q8IWU9 490 aa9.3□□□□□ -0.92
GTF3C3-201ENST00000263956 SENP2Q9HC62 589 aa9.3□□□□□ -0.92
GTF3C3-201ENST00000263956 SLC25A27O95847 323 aa9.3□□□□□ -0.92
GTF3C3-201ENST00000263956 FKBP1BP68106 108 aa9.3□□□□□ -0.92
GTF3C3-201ENST00000263956 PPATQ06203 517 aa9.3□□□□□ -0.92
GTF3C3-201ENST00000263956 SPECC1Q5M775 1068 aa9.3□□□□□ -0.92
GTF3C3-201ENST00000263956 USP17L6PQ6QN14 398 aa9.3□□□□□ -0.92
GTF3C3-201ENST00000263956 GMCL1Q96IK5 515 aa9.3□□□□□ -0.92
GTF3C3-201ENST00000263956 PITPNM2Q9BZ72 1349 aa9.3□□□□□ -0.92
GTF3C3-201ENST00000263956 PSMA7O14818 248 aa9.3□□□□□ -0.92
GTF3C3-201ENST00000263956 POLR2DO15514 142 aaKnown RBP9.3□□□□□ -0.92
GTF3C3-201ENST00000263956 SEC23AQ15436 765 aa9.3□□□□□ -0.92
GTF3C3-201ENST00000263956 STXBP2Q15833 593 aa9.3□□□□□ -0.92
GTF3C3-201ENST00000263956 ADALQ6DHV7 355 aa9.3□□□□□ -0.92
GTF3C3-201ENST00000263956 GMCL1P1Q8NEA9 526 aa9.3□□□□□ -0.92
GTF3C3-201ENST00000263956 SHTN1A0MZ66 631 aa9.29□□□□□ -0.92
GTF3C3-201ENST00000263956 TNPO2O14787 897 aaKnown RBP9.29□□□□□ -0.92
GTF3C3-201ENST00000263956 HSP90AA2PQ14568 343 aaPredicted RBP9.29□□□□□ -0.92
GTF3C3-201ENST00000263956 ATG4CQ96DT6 458 aa9.29□□□□□ -0.92
GTF3C3-201ENST00000263956 IFT74Q96LB3 600 aa9.29□□□□□ -0.92
GTF3C3-201ENST00000263956 TCHPQ9BT92 498 aa9.29□□□□□ -0.92
GTF3C3-201ENST00000263956 YBX3P16989 372 aaKnown RBP eCLIP9.29□□□□□ -0.921e-6■■□□□ 11.9
GTF3C3-201ENST00000263956 LONP1P36776 959 aaKnown RBP9.29□□□□□ -0.92
GTF3C3-201ENST00000263956 DNM2P50570 870 aa9.29□□□□□ -0.92
GTF3C3-201ENST00000263956 SLC39A14Q15043 492 aa9.29□□□□□ -0.92
GTF3C3-201ENST00000263956 CCDC40Q4G0X9 1142 aa9.29□□□□□ -0.92
GTF3C3-201ENST00000263956 FAM160B1Q5W0V3 765 aa9.29□□□□□ -0.92
GTF3C3-201ENST00000263956 EEPD1Q7L9B9 569 aa9.29□□□□□ -0.92
GTF3C3-201ENST00000263956 PPFIBP1Q86W92 1011 aa9.29□□□□□ -0.92
GTF3C3-201ENST00000263956 GPRC5AQ8NFJ5 357 aa9.29□□□□□ -0.92
GTF3C3-201ENST00000263956 JMJD4Q9H9V9 463 aa9.29□□□□□ -0.92
GTF3C3-201ENST00000263956 MANSC4A6NHS7 340 aaPredicted RBP9.29□□□□□ -0.92
GTF3C3-201ENST00000263956 SMTNP53814 917 aa9.29□□□□□ -0.92
GTF3C3-201ENST00000263956 PKP1Q13835 747 aa9.29□□□□□ -0.92
GTF3C3-201ENST00000263956 HS2ST1Q7LGA3 356 aa9.29□□□□□ -0.92
GTF3C3-201ENST00000263956 FAM114A1Q8IWE2 563 aa9.29□□□□□ -0.92
GTF3C3-201ENST00000263956 ADAMTS7Q9UKP4 1686 aa9.29□□□□□ -0.92
GTF3C3-201ENST00000263956 PALM3A6NDB9 673 aaPredicted RBP9.28□□□□□ -0.92
GTF3C3-201ENST00000263956 GCLCP48506 637 aaPredicted RBP9.28□□□□□ -0.92
GTF3C3-201ENST00000263956 FKBP15Q5T1M5 1219 aa9.28□□□□□ -0.92
GTF3C3-201ENST00000263956 TRIM47Q96LD4 638 aa9.28□□□□□ -0.92
GTF3C3-201ENST00000263956 RIC8AQ9NPQ8 531 aa9.28□□□□□ -0.92
GTF3C3-201ENST00000263956 NRBP2Q9NSY0 501 aa9.28□□□□□ -0.92
GTF3C3-201ENST00000263956 GJB4Q9NTQ9 266 aa9.28□□□□□ -0.92
GTF3C3-201ENST00000263956 FBXO28Q9NVF7 368 aa9.28□□□□□ -0.92
GTF3C3-201ENST00000263956 POLR3EQ9NVU0 708 aa9.28□□□□□ -0.92
GTF3C3-201ENST00000263956 ZNHIT6Q9NWK9 470 aaKnown RBP9.28□□□□□ -0.92
GTF3C3-201ENST00000263956 KCNG1Q9UIX4 513 aa9.28□□□□□ -0.92
GTF3C3-201ENST00000263956 CLIC4Q9Y696 253 aa9.28□□□□□ -0.92
GTF3C3-201ENST00000263956 NUP98P52948 1817 aa9.28□□□□□ -0.92
GTF3C3-201ENST00000263956 PTPRAP18433 802 aa9.28□□□□□ -0.92
GTF3C3-201ENST00000263956 ZNF165P49910 485 aa9.28□□□□□ -0.92
GTF3C3-201ENST00000263956 SYCP1Q15431 976 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms