RNA–Protein interactions for RNA: ENST00000262055.8

LETMD1-201, Transcript of LETM1 domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LETMD1, Length 2,112 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-201ENST00000262055 METAP2P50579 478 aaKnown RBP eCLIP16.78■□□□□ 0.28
LETMD1-201ENST00000262055 KRT85P78386 507 aa16.78■□□□□ 0.28
LETMD1-201ENST00000262055 CCDC144BQ3MJ40 725 aa16.78■□□□□ 0.28
LETMD1-201ENST00000262055 KCTD1Q719H9 257 aa16.78■□□□□ 0.28
LETMD1-201ENST00000262055 GTF3C6Q969F1 213 aa16.78■□□□□ 0.28
LETMD1-201ENST00000262055 WNK4Q96J92 1243 aa16.78■□□□□ 0.28
LETMD1-201ENST00000262055 CLSTN2Q9H4D0 955 aa16.78■□□□□ 0.28
LETMD1-201ENST00000262055 AS3MTQ9HBK9 375 aa16.78■□□□□ 0.28
LETMD1-201ENST00000262055 UNCXA6NJT0 531 aa16.77■□□□□ 0.28
LETMD1-201ENST00000262055 MYO1CO00159 1063 aa16.77■□□□□ 0.28
LETMD1-201ENST00000262055 PPIL2Q13356 520 aa16.77■□□□□ 0.28
LETMD1-201ENST00000262055 MOGSQ13724 837 aa16.77■□□□□ 0.28
LETMD1-201ENST00000262055 GRM4Q14833 912 aa16.77■□□□□ 0.28
LETMD1-201ENST00000262055 AXDND1Q5T1B0 1012 aaPredicted RBP16.77■□□□□ 0.28
LETMD1-201ENST00000262055 TTBK2Q6IQ55 1244 aa16.77■□□□□ 0.28
LETMD1-201ENST00000262055 TMCO3Q6UWJ1 677 aa16.77■□□□□ 0.28
LETMD1-201ENST00000262055 GOLGA5Q8TBA6 731 aa16.77■□□□□ 0.28
LETMD1-201ENST00000262055 KCNH4Q9UQ05 1017 aa16.77■□□□□ 0.28
LETMD1-201ENST00000262055 PALM3A6NDB9 673 aaPredicted RBP16.76■□□□□ 0.27
LETMD1-201ENST00000262055 SKILP12757 684 aa16.76■□□□□ 0.27
LETMD1-201ENST00000262055 GTF2A1P52655 376 aaPredicted RBP16.76■□□□□ 0.27
LETMD1-201ENST00000262055 GSDMDP57764 484 aa16.76■□□□□ 0.27
LETMD1-201ENST00000262055 HTRA3P83110 453 aa16.76■□□□□ 0.27
LETMD1-201ENST00000262055 NTRK3Q16288 839 aa16.76■□□□□ 0.27
LETMD1-201ENST00000262055 SYT10Q6XYQ8 523 aa16.76■□□□□ 0.27
LETMD1-201ENST00000262055 SH2B1Q9NRF2 756 aaPredicted RBP16.76■□□□□ 0.27
LETMD1-201ENST00000262055 ABT1Q9ULW3 272 aaKnown RBP16.76■□□□□ 0.27
LETMD1-201ENST00000262055 COL11A1P12107 1806 aaPredicted RBP16.76■□□□□ 0.27
LETMD1-201ENST00000262055 VCAM1P19320 739 aa16.76■□□□□ 0.27
LETMD1-201ENST00000262055 ZNF543Q08ER8 600 aa16.76■□□□□ 0.27
LETMD1-201ENST00000262055 RTN1Q16799 776 aa16.76■□□□□ 0.27
LETMD1-201ENST00000262055 FAM83BQ5T0W9 1011 aa16.76■□□□□ 0.27
LETMD1-201ENST00000262055 KRBA2Q6ZNG9 492 aa16.76■□□□□ 0.27
LETMD1-201ENST00000262055 RASAL3Q86YV0 1011 aa16.76■□□□□ 0.27
LETMD1-201ENST00000262055 CCDC82Q8N4S0 544 aa16.76■□□□□ 0.27
LETMD1-201ENST00000262055 GOPCQ9HD26 462 aa16.76■□□□□ 0.27
LETMD1-201ENST00000262055 GPCPD1Q9NPB8 672 aa16.76■□□□□ 0.27
LETMD1-201ENST00000262055 SYNPO2Q9UMS6 1093 aa16.76■□□□□ 0.27
LETMD1-201ENST00000262055 A0A0G2JLL6 359 aaPredicted RBP16.75■□□□□ 0.27
LETMD1-201ENST00000262055 SLC1A4P43007 532 aa16.75■□□□□ 0.27
LETMD1-201ENST00000262055 ZNF165P49910 485 aa16.75■□□□□ 0.27
LETMD1-201ENST00000262055 ZNF157P51786 506 aaPredicted RBP16.75■□□□□ 0.27
LETMD1-201ENST00000262055 CCZ1BP86790 482 aa16.75■□□□□ 0.27
LETMD1-201ENST00000262055 CCZ1P86791 482 aaPredicted RBP16.75■□□□□ 0.27
LETMD1-201ENST00000262055 FUT2Q10981 343 aa16.75■□□□□ 0.27
LETMD1-201ENST00000262055 SH3D19Q5HYK7 790 aa16.75■□□□□ 0.27
LETMD1-201ENST00000262055 SPRYD7Q5W111 196 aa16.75■□□□□ 0.27
LETMD1-201ENST00000262055 SYNE3Q6ZMZ3 975 aa16.75■□□□□ 0.27
LETMD1-201ENST00000262055 PRRT2Q7Z6L0 340 aaPredicted RBP16.75■□□□□ 0.27
LETMD1-201ENST00000262055 SRBD1Q8N5C6 995 aaKnown RBP16.75■□□□□ 0.27
LETMD1-201ENST00000262055 FBXO18Q8NFZ0 1043 aa16.75■□□□□ 0.27
LETMD1-201ENST00000262055 SECISBP2LQ93073 1101 aaKnown RBP16.75■□□□□ 0.27
LETMD1-201ENST00000262055 GMCL1Q96IK5 515 aa16.75■□□□□ 0.27
LETMD1-201ENST00000262055 MS4A4AQ96JQ5 239 aa16.75■□□□□ 0.27
LETMD1-201ENST00000262055 TRERF1Q96PN7 1200 aa16.75■□□□□ 0.27
LETMD1-201ENST00000262055 SRRTQ9BXP5 876 aaKnown RBP16.75■□□□□ 0.27
LETMD1-201ENST00000262055 UBA5Q9GZZ9 404 aa16.75■□□□□ 0.27
LETMD1-201ENST00000262055 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.75■□□□□ 0.27
LETMD1-201ENST00000262055 USP27XA6NNY8 438 aa16.75■□□□□ 0.27
LETMD1-201ENST00000262055 CYTH3O43739 400 aa16.75■□□□□ 0.27
LETMD1-201ENST00000262055 SLC16A2P36021 539 aa16.75■□□□□ 0.27
LETMD1-201ENST00000262055 APLP1P51693 650 aa16.75■□□□□ 0.27
LETMD1-201ENST00000262055 RCAN1P53805 252 aa16.75■□□□□ 0.27
LETMD1-201ENST00000262055 ZSCAN26Q16670 478 aa16.75■□□□□ 0.27
LETMD1-201ENST00000262055 NOM1Q5C9Z4 860 aaKnown RBP16.75■□□□□ 0.27
LETMD1-201ENST00000262055 TREML2Q5T2D2 321 aa16.75■□□□□ 0.27
LETMD1-201ENST00000262055 RGMBQ6NW40 437 aa16.75■□□□□ 0.27
LETMD1-201ENST00000262055 SCAND2PQ9GZW5 306 aaPredicted RBP16.75■□□□□ 0.27
LETMD1-201ENST00000262055 SH2D4AQ9H788 454 aa16.75■□□□□ 0.27
LETMD1-201ENST00000262055 FBXO28Q9NVF7 368 aa16.75■□□□□ 0.27
LETMD1-201ENST00000262055 FAM155AB1AL88 458 aaPredicted RBP16.74■□□□□ 0.27
LETMD1-201ENST00000262055 JAK2O60674 1132 aa16.74■□□□□ 0.27
LETMD1-201ENST00000262055 PARP1P09874 1014 aaKnown RBP16.74■□□□□ 0.27
LETMD1-201ENST00000262055 CALM1P0DP23 149 aa16.74■□□□□ 0.27
LETMD1-201ENST00000262055 CALM2P0DP24 149 aa16.74■□□□□ 0.27
LETMD1-201ENST00000262055 CALM3P0DP25 149 aa16.74■□□□□ 0.27
LETMD1-201ENST00000262055 CCDC96Q2M329 555 aa16.74■□□□□ 0.27
LETMD1-201ENST00000262055 TMTC3Q6ZXV5 915 aa16.74■□□□□ 0.27
LETMD1-201ENST00000262055 CTCFLQ8NI51 663 aaPredicted RBP16.74■□□□□ 0.27
LETMD1-201ENST00000262055 C12orf42Q96LP6 360 aa16.74■□□□□ 0.27
LETMD1-201ENST00000262055 ZIC5Q96T25 663 aa16.74■□□□□ 0.27
LETMD1-201ENST00000262055 MYCBPQ99417 103 aaPredicted RBP16.74■□□□□ 0.27
LETMD1-201ENST00000262055 MAP3K14Q99558 947 aa16.74■□□□□ 0.27
LETMD1-201ENST00000262055 C19orf81C9J6K1 198 aa16.73■□□□□ 0.27
LETMD1-201ENST00000262055 KLRF2D3W0D1 207 aa16.73■□□□□ 0.27
LETMD1-201ENST00000262055 CXCL11O14625 94 aa16.73■□□□□ 0.27
LETMD1-201ENST00000262055 CLGNO14967 610 aa16.73■□□□□ 0.27
LETMD1-201ENST00000262055 BMP3P12645 472 aa16.73■□□□□ 0.27
LETMD1-201ENST00000262055 GUCY2CP25092 1073 aa16.73■□□□□ 0.27
LETMD1-201ENST00000262055 SRLQ86TD4 932 aa16.73■□□□□ 0.27
LETMD1-201ENST00000262055 DCAF4Q8WV16 495 aa16.73■□□□□ 0.27
LETMD1-201ENST00000262055 PHKBQ93100 1093 aa16.73■□□□□ 0.27
LETMD1-201ENST00000262055 EXOC4Q96A65 974 aa16.73■□□□□ 0.27
LETMD1-201ENST00000262055 NCAPGQ9BPX3 1015 aa16.73■□□□□ 0.27
LETMD1-201ENST00000262055 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.73■□□□□ 0.27
LETMD1-201ENST00000262055 hCG_1642624A0A1W2PR95 340 aa16.73■□□□□ 0.27
LETMD1-201ENST00000262055 USP14P54578 494 aa16.73■□□□□ 0.27
LETMD1-201ENST00000262055 ERCC6LQ2NKX8 1250 aa16.73■□□□□ 0.27
LETMD1-201ENST00000262055 NSUN7Q8NE18 718 aaKnown RBP16.73■□□□□ 0.27
LETMD1-201ENST00000262055 NEK11Q8NG66 645 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms